Lepisosteus oculatus (spotted gar): 102691743
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Entry
102691743 CDS
T07349
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
loc03009
]
102691743 (utp20)
Ribosome biogenesis [BR:
loc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102691743 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
UME
Motif
Other DBs
NCBI-GeneID:
102691743
NCBI-ProteinID:
XP_015207377
LinkDB
All DBs
Position
LG8:complement(2742531..2783278)
Genome browser
AA seq
2271 aa
AA seq
DB search
MKTKSSYHKSENTFRFLTFSERLANVNIDVIHRIDRTGSYAEEVETYFFEGLMKWRDLNL
TAHFVKFLKEVIHKCQSFNLLVFHQSSVVESLKVHLKVKDSLAYQPLLDLVVLLARDLQT
DFYPHFRDFFIIVTSLLETQDTQLLEWAFTCLSYLYKYLWRLMVKDMAEIYRLYSTLLAH
KKEHIRNFAAESFAFLMRKVSDLDGLFNFMFLDLEEHPEKAEGVGQLLFEMCKGVRNMFH
SCAKKAFAIALRKLGPVTEKEQTLPWVTVGEALEHMAQTTASHVHTEHFVVLWDALQACA
DEVSGELQGADSECSPQIERLLRVYQALVEHGHGSKVTKPELVCETLMKLAQAPQLHVSC
RQQLLKVISSLVLGENVTLPSTLIEEAVRKVFGSGMGQELILPFSEEMFSMKQFEQLFLP
SLLQYLEHLFGMDDSVVRQLALELLAKLILFKAAPPTDGSMAFEKYPLVFTGQSSGSFPS
DLSALLLADLYYSRLALNGCTEHLSHDALLGLYATLHRNLSSNISKVRLLTLRIFTHFEA
ELPQRVQDEERVETQTVFAISLQAELVPATVHDYREKLLHLRKLRHDLVQTALPRGAFQE
VPLRYLIAMLYLNFSPLWDPVIELIVSHAKDMDNKDFWKVFYEHLDMVALLAEKELREEA
KEEPGTGLDRDRVACGDVGVLYLEQLGGATELDDRTDFTNFRFLLWKAMALFPDRVEPRS
RELAPLLLRFTDNEYYPADLLVAPTQDLRKQHGAAPEPEEAGEEDVGMKDEEEEEEEEEE
KDRAEPRKQAGKKTPRKAAAKQLIAHLKVFSLFANPRSLYLEPKLRELYTRLLSHQDQGI
QKIALECILTYKDSFLLPYKENLQRLLDDKLFKEEIVHFNISEECAVVEAPHRPGLMPVL
MRILYGRMRSKTGSRSQGKAGAVTRTSIVLRFLAGSLPEEIGMFIDLLLEPVRHYSQGPC
LAAVQRALEQTDLSRVLPLGQQHSILNSIELVIKRLGHLIHHYLPKILQILLCVTASASA
VLDRREQVQAGCRSPLKNLRRLGILRIQDFFDGFESYSFAAEEVDAVFLAVVWPQVTRLP
SESPYAPTPLLKLLHVWSRNARYFPLLAKQKPGRPECDVLHNVFALLSAKNVSQATVSVV
MDVAESLVSAPDFEPGEGAGPLTVGCCVVPEPAEGTGAAGEHLTLGCKLLLPCIPAVLQY
LSGVVGNAERMKKKKFRAQVSKELGILSKISKFVSDKEQSSVLIRLLLPYLHKPNNTQET
EIDILETTQNLLKQSANPAAFLKPIARLFSIIQNKLSRQTLCRLFQTLADLDSGLKYITD
ITAKLNAFDRKHLDEVNFDLRLSAFQSVTTHIKEMTTLDVSYLFTVMQNCFHSIELGDMS
LGDSATLCLMAIIAQVATVDHTAEEFREIIQRTMLEAVKRGLRSKTESVQQAYTTVLSSL
IQTFPSNPELKDLVQLTDYNDPESDFFEHMKHIQIHRRARALRKFAKQLTEGTIVMSPKS
LQSYIMPYPMTALFDEKMLKRIPIAFAMVKVMQSLPQEVMEANLPGILLKVCVLLRNRFQ
EIRDVARNTLIKIIETLGCRYLQYLLREMQSVLVKGYQVHVLSFTVYQLLKAVSGSLQSG
DLDPCMNILVEIFNNELFGNVAEEKEVKGIVSKVMEARSSKSYESYEILAQFAGKDQVAR
LILPLKESISILVKNVKKHSITDKQLQVLLAYAEEDIYDQSRQATAFGLLKAILSRQLVV
PEMEDVMQKVAKFSITGQNEQIRVQCRQVLITLLCILGCCMFKISLYFDSYEYDTGRESA
LEIMAYIFQTFPQKLLHHHCGLLFAPLALVMVNDDSPKCKKMAALAIKSLLSKLDVDHQD
NMYALVQAWLTDEKSSLRRLGVQVCGLFAEGEGLQFGRRLEDLLPLIESEIDPSKFENIE
EEADEKAADRLLFSLLTLVTKLVKECNFLQLSKPQETLRKIWSHIDSHLWYPHSWVWLTA
SQIFGLLFAAHNPEDLVSQWNNRNAEGNGKTSEPVATTFLLDNLDKKMRELVLSFCHQLQ
SKFLDQSLGEQVVKNLVFVAKVIYLLAPDSEPLAGAGGDSAGEEEAEEPAGGARDSGGSD
RLPSLLWVMKKLSVLAKREAASTPKDPLKRTCVFKFLGAISVHLGKDRLSPYLTTIIGPL
YRELDSTYAEQDPTLKNLSQEIIDLLKKLVGLESFSLAFAAVQKEATQRRAVRKRHKAMQ
AVAHPDVAASKKLKKHQKKIEARKRKIEFLRPGYKAKRHKSRGLKDLAMVE
NT seq
6816 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccaaatcgtcatatcataaatcggaaaacacttttaggtttcttaccttttct
gaacggcttgctaatgtaaatatcgatgtcattcatcgtattgacaggacgggaagctat
gcagaggaggttgaaacatacttttttgaagggctgatgaaatggagggacctgaattta
acggcacattttgtgaagtttctcaaagaagtgatccacaaatgccagtccttcaacctg
ctggttttccaccagagttcagttgtggagagtttgaaggtccacctcaaagtcaaagac
agcctggcctatcagcctcttttggacctagtggttctgctggccagagacctccagact
gatttttatccccattttcgagatttctttattattgtcacctccctgctggagactcaa
gacacacagctgttggaatgggcttttacctgcctgtcctacctctacaagtacctgtgg
aggctcatggtgaaggatatggccgagatttaccggttgtatagtacgttgctggcacac
aaaaaggaacacatccgaaattttgctgcagaaagctttgcttttttgatgagaaaggtg
tctgacctggatggcctcttcaacttcatgttcctcgatctggaggagcacccagaaaaa
gcagagggcgtcggtcagctgctgtttgaaatgtgcaagggcgtcaggaacatgtttcat
tcgtgtgccaagaaggcatttgccattgctctgaggaagctggggcccgtgacggagaag
gagcagactctgccctgggtgacagttggagaggcgctcgagcacatggcccagaccaca
gcttcacacgtccacacggagcacttcgtggtgctgtgggatgccttgcaggcatgcgcc
gatgaggtgtcgggagagctgcagggcgcggacagtgagtgctcgccccagatcgagagg
ctcctgcgggtttaccaggcgttagtggagcatgggcacgggtcaaaggtcaccaagccg
gagctggtgtgtgagacactgatgaagcttgcccaggccccccagctgcatgtgtcctgc
agacagcagctcttgaaggtgatctcgtctctggtgctgggcgagaatgtcaccctgccg
tccaccttgattgaggaagctgttcggaaggtgtttggaagtggaatgggccaggagctg
attctgcctttctcggaagagatgttcagcatgaagcagttcgaacagcttttcctgccc
agtctgcttcagtatttggagcacctgtttgggatggatgactctgtcgttcgccaactg
gctctggagctgcttgcgaaactgatcttgttcaaggccgcacctccaactgatggatcc
atggccttcgagaagtaccctctcgttttcacaggacagtcttcggggagcttcccctcg
gacctgtctgccctgctgctggcagacctgtactactccagactggctctgaacggctgc
actgagcacctctcccatgatgccttgctggggttatatgccactcttcaccgcaacctc
tcttcaaatatatccaaggttcgactgctgacgttgagaatctttactcactttgaagct
gagcttccacagcgagtgcaggatgaggaacgagtggaaacgcagacagtgttcgcaatc
tccctgcaagcagagctggttccagcgactgtccacgactacagggagaagctgcttcac
ctgcgcaagctcagacacgacttggtgcagactgctcttcccagaggagccttccaggag
gttcccctgcgctacctgattgcaatgctgtacctcaacttcagtcctctgtgggaccct
gttattgagctcatagtatcccatgccaaggacatggataataaagatttctggaaagtc
ttttacgaacatctggatatggtggcacttttagcagagaaagagctccgtgaggaggcc
aaggaggagccgggtacgggccttgatcgggacagagttgcatgtggcgacgtgggggtg
ctgtacctcgagcagctcgggggtgccacggagctggacgaccggaccgacttcaccaac
ttccggttcctgctgtggaaggcgatggccctgttccccgacagggtggagccccgctcc
agggagctggctccgctgctgctgaggttcactgataacgagtactacccagccgatctc
ttggtggcgccgacgcaggacctgcgcaagcagcacggtgctgcgccggagccagaggag
gccggagaggaggacgtgggaatgaaagacgaggaggaggaggaggaggaggaggaagag
aaagaccgcgcagagccacggaagcaggctgggaaaaagacgccgaggaaggcggccgct
aagcagctgatcgcacacctgaaagtgttctcactgtttgccaatccacggtccctttat
ctggagccaaaactgagagagctgtacactcggctactttcccatcaagaccaagggatc
cagaaaatagctctggagtgcatcctgacttacaaagacagcttccttctgccttacaag
gaaaacctccagaggctcctggatgacaagctctttaaagaggagattgttcattttaac
atttctgaagagtgtgctgtagtagaggcgccccacagaccgggactcatgcctgttcta
atgagaatcctttacgggcggatgaggagtaagacgggcagcaggtcccagggtaaagca
ggagccgtgactcggacatccatcgtcctgcgcttcctagcgggatccctcccggaggag
atcgggatgttcatcgacctcctcctggagcccgtccgtcactacagccaaggtccctgc
ctggctgcggtacagcgagccctggagcagacggacctgtccagggtgctccctttgggc
caacagcacagcattctcaacagcatcgagctcgtcataaaacgactgggccacctgatt
caccactacctgccaaagatactgcagatcctcctgtgtgtcacagcctccgcctccgcc
gtgctggaccgaagggaacaggtacaagcaggatgtcgcagcccgttgaagaacctgagg
cgcctgggaatcctccgaatccaggatttcttcgatggctttgagtcttacagctttgct
gcggaggaagttgacgccgtgttcctggcagtggtttggccccaggtcacccgtcttcct
tctgagagcccttatgcaccgaccccactgctgaaactgctccatgtgtggagtcggaat
gccaggtatttccctctgctggccaagcagaagccgggccgcccggagtgcgacgtcctc
cacaacgtgttcgctctgctctcggcgaagaacgtctcccaggcgacggtgagcgtggtc
atggacgtcgccgagagcctcgtgtccgcgcccgacttcgagcccggcgagggcgccggc
cctctgaccgtcggctgctgtgtggttccggagcctgcggaagggacgggcgctgccgga
gagcacctgaccctgggctgcaagctgctcctgccctgcatcccggccgtgctgcagtac
ctcagcggggtggtgggcaacgcggagcggatgaagaagaagaagttcagggcacaagtc
agcaaggagctcggcatcctgtccaagatcagcaagtttgtgagtgacaaggagcagagc
tcagtgctcattagactccttttaccctatctccacaagcccaacaatacacaggaaaca
gagattgatatcttggagacgactcagaacttactgaagcaaagcgcaaacccagctgcc
ttcctcaagcccatagccagactcttctccataatccagaacaagctgtcccgtcagact
ctctgcaggctgttccagacattagcggatttggacagtggattgaagtacattactgac
atcacggccaagctgaatgctttcgaccgaaaacacctggatgaagtcaatttcgacctt
cgcctgtcagctttccagtcggttaccacacacatcaaagagatgaccactctcgatgtc
agttacctcttcacagtcatgcagaactgcttccattccattgagttaggtgatatgtcc
ctgggtgacagcgccaccttgtgcctgatggctatcatcgctcaggtagccactgtggac
cacactgcagaggagttcagagaaataatccagcgaactatgctggaggctgtgaagaga
gggctcaggagcaaaacagagagtgttcagcaagcatacacaacagtgctctctagcctg
atccagacattcccctcgaacccggagttaaaggacttggtccagctgaccgattacaat
gacccggagtctgacttctttgagcacatgaagcacatccagatccacaggagagctcga
gccttaagaaagtttgctaaacagctcacagagggaactatagttatgtcacccaaatcc
ctgcagagctacatcatgccttatcctatgactgcactgtttgacgagaagatgttaaag
agaattcccatagcgttcgccatggtcaaagtcatgcagtccctcccacaggaggtcatg
gaagcgaacttacctggcattctgctgaaggtgtgtgtgctgctgagaaatcgcttccag
gagatccgagatgtcgctcgcaacacccttatcaaaatcatagagaccctgggctgccgc
taccttcagtacctcttgagggagatgcagtcggttttagtcaagggctatcaggtgcac
gtcctgagcttcaccgtgtatcagctgctgaaggctgtcagtggctcactgcagagcgga
gacctggatccttgcatgaacatcctggtggagatcttcaacaacgagctgttcggtaat
gtggctgaagagaaggaagtgaaaggaattgtctccaaggtgatggaggcaagaagcagc
aaaagctacgagtcctatgagatcttggcccagtttgctgggaaggaccaagtggctcgt
cttattttgcccttgaaagagtcgatctcgatcctggtgaagaacgtgaagaagcacagc
atcacagacaagcagctgcaggtcctgctggcctacgcggaagaggacatctacgaccag
tccagacaggcaacagcgttcgggctgctgaaggctattttgtcgaggcagcttgttgtt
ccggaaatggaagatgtgatgcagaaagtggccaagttttctataactggacagaacgaa
cagatccgtgtccagtgtcgtcaggtactcataactcttctttgtatcctcggttgctgt
atgtttaaaatctcactttattttgacagttacgaatatgataccggaagagagtcagcc
ctggaaattatggcctatatcttccagaccttcccccagaaactgctgcatcaccactgc
ggcctgttgttcgcgcccctcgccttggtgatggtgaatgatgattctccaaagtgcaag
aagatggccgccctggctatcaaatcgcttctcagcaagctggacgtagaccaccaggac
aacatgtacgccttggtacaagcctggctcactgacgagaagagctcactccggcgcctg
ggggtccaggtctgtgggctgttcgcagaaggagaaggtctgcagttcggcagacgactg
gaggatctgctccctcttattgaaagtgagatcgacccttcgaaatttgaaaacattgaa
gaagaagccgatgaaaaggctgctgacagactgctgttcagtcttctcactctggtgacc
aaactggtgaaggaatgtaacttcctgcagctttccaaaccacaggaaaccctcaggaaa
atctggagtcacattgactctcatctgtggtacccccattcctgggtgtggctgactgcg
tctcagattttcggtttgctgtttgctgctcacaatccggaggatttggtgagccagtgg
aacaacaggaacgctgaaggaaatgggaagacatcagagcctgtagccaccactttctta
ctggataatctagacaaaaagatgagagagctggttttatcattctgtcatcagctgcag
tcgaagttcctggatcagtcgctgggagagcaggtggtgaagaacctcgtctttgtggcc
aaggtgatctacctgctggcgccggactccgagccgctggcgggggcggggggggattcg
gccggcgaggaggaggccgaggagccggccggcggggcgagagactcggggggctcggac
aggctgccctcgctgctgtgggtgatgaagaagctgtccgtgctggccaagagggaggcc
gccagcacgccgaaggaccccttgaagaggacctgtgtcttcaagttcctgggtgccatt
tcggttcatcttgggaaagacaggctgagcccttatctgaccaccataattggacccctg
tacagagaactggacagcacttacgcagagcaagaccccactctgaagaacctttcccag
gaaattatcgacctgctgaagaagttggtgggcctggagagcttctccctggccttcgcc
gctgttcagaaggaggccacgcagaggcgggctgtgcggaaacggcacaaggccatgcag
gcggtcgcccatcctgatgtcgccgcgagcaagaaactgaagaaacaccagaagaagata
gaagccaggaagaggaagattgaatttctgcgtcccgggtataaggccaagaggcacaaa
agccgtggactgaaagacttggcaatggtggagtga
DBGET
integrated database retrieval system
