KEGG   Lepisosteus oculatus (spotted gar): 102691840
Entry
102691840         CDS       T07349                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
loc  Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:loc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:loc03036]
    102691840 (kdm4b)
Enzymes [BR:loc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     102691840 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     102691840 (kdm4b)
Chromosome and associated proteins [BR:loc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    102691840 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN DUF7141 PHD DUF4537
Other DBs
NCBI-GeneID: 102691840
NCBI-ProteinID: XP_006639963
Ensembl: ENSLOCG00000000105
LinkDB
Position
LG19:167114..292854
AA seq 1084 aa
MASENPNAQNPGCKIMTFRPTMEEFRDFGKYIAYIESQGAHRAGLAKVIPPEEWKPRKSY
DSIDEMVIPAPIMQVVTGQSGLFTQYNIQKKSMTVGEYRKLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDKGIGEWNIGHLNTLLDMVEQECGIVIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRCLQPDRYDQWKQGKDVTALDHLKPTDLTSPELELWWE
RRAMLKDKLLRRAMRKMKQVRRLKMEDIKALAEVGVMVDPVEHQRMVEAREAEKKEKEAA
SGDQEEPKHVASSAPLDKSQAGRQLPVAEGEKAKKKKKKKAPVQGGAAAALEAAEAAGLS
PAEPAVRVQEEGEQSFEARPIIPTLYVMPSPKKVIFDKERMSCQEAFEQFAKSKAAHASP
IRRQGHWVKDESSDAEEPGEGRTEKRGIQPPPSYSKLKMKMEVKKSRRHPFSKPPMRSPL
SVVKQEASSDEELFTSFATEEELDPEAVKTVLSHLWQNKSHNFLAERRFNAAVALIEPYC
AICTLFFPYIQPNKDLSLSADSLTIPVSKCGTYTRPLIPEMCFSSGGENTEPLPANSYIG
DDGTSLLISCSKCCLQVHASCYGVRPDHVKEGWTCSRCTANAWTVDCCLCNLRGGALQMT
TDKRWVHVICAIAVPEARFVNAVERNPVDISTIPEQRKNLKCVYCYKTMKRVSGACIQCS
IDRCSTSFHVTCAHTAGVLMEPDDWPYIVSITCHKHKSTNQNLSQATKEVSLGQTVIGRN
RNGLYYKCRVIGTATQNFYEVNFEDGSYSDNLYPENVISRDCLQFGPPVEGEVIQVQWTD
GNIFNAKFITAHLMNVYQVEFEDGSQLTVKRSDLHTLEEELPKKVKSRLSLSTAVVQDSS
FSGDEVKAAKRPRLPTPPPSPTPPPAPALPPPLEDYGHGSDYLAIMESLLQTQFPPPEGR
SSTF
NT seq 3255 nt   +upstreamnt  +downstreamnt
atggcctccgaaaacccaaatgcccagaacccaggctgcaagatcatgacgttccggcct
accatggaagaattccgagatttcggaaagtacattgcatatattgaatcccagggagcc
cacagagctggactggcaaaggtcatccctccggaagaatggaagcctcggaagtcgtac
gactccatcgacgagatggtcatccctgcgcccatcatgcaggtcgtgactggccagtcc
ggcctcttcactcagtacaacatccagaagaagtccatgacggtgggcgagtaccgcaag
ctggccaacagcgagaaatactgcactcctcgacaccaggatttcgaggatctagagcga
aaatactggaagaacctgacttttgtttctcctatttacggagcagacatcagtggctcg
ctttacgacaagggcataggtgagtggaacatcgggcacctgaacacactgctggacatg
gtggagcaggagtgtggcatcgtgattgagggggtgaacaccccctatctgtactttggg
atgtggaagaccacctttgcctggcacacggaggacatggacctctacagcatcaactat
ctgcactttggagagcccaagtcttggtatgccatccctcctgaacatgggaagaggctg
gagagactggcaaaaggattcttcccaggcagttctcaaggctgtgatgctttcctgcgg
cacaaaatgaccttgatttcaccctccatcctcaagaagtacggaatcccctttgacagg
attactcaggaggctggggagttcatgatcacctttccctacgggtaccacgccgggttc
aatcacggcttcaactgcgccgagtccaccaacttcgccacgctgcgctggatcgactac
ggcaaaatggccacacagtgcacgtgtcggaaggatatggtgaagatctcgatggatgtg
tttgtgcggtgcctgcagcctgaccgctatgaccagtggaagcaggggaaggatgtgacg
gcgctggatcacctgaagcccactgacctcaccagccccgagctggaactgtggtgggag
agacgggccatgttgaaggacaagctgctgcgaagggcgatgcggaagatgaaacaggtt
cgtaggctgaagatggaggatatcaaggcactggcggaggtgggagtaatggtcgaccca
gtggagcaccagcgcatggtggaagccagagaggcagagaagaaagaaaaggaagcggcg
tccggtgaccaggaagagccaaaacatgttgccagttcagcacctctagacaagagccag
gcggggcggcagctgcccgtggcagagggcgagaaggcgaaaaagaaaaagaagaagaaa
gccccggtgcaggggggggcggcggcggccttggaggctgcagaggccgctggcttgtcc
ccagcagagccggcggtgcgcgtccaggaggagggggagcagagctttgaggcgcgtccc
atcatccccaccctgtacgtcatgcccagtcccaagaaggtcatcttcgataaggagcgc
atgtcctgccaggaggcctttgagcagtttgccaagagcaaggcggcccatgcctctccc
atcaggagacagggccactgggtgaaggacgagagcagtgacgccgaagagcccggggag
ggaagaaccgagaagaggggcatccagccccccccgtcctactccaagctgaaaatgaag
atggaagtgaagaaaagtcgccggcaccctttcagcaagccgcccatgcgctccccactg
tccgtggtcaaacaggaggcctccagtgatgaagagctgttcacctcattcgctacagag
gaagagctggatcctgaggctgtgaagacagtcctgtctcacctctggcagaacaagtca
cacaatttcctagccgagcggcgcttcaatgctgcagtggccctcattgagccttactgt
gccatctgcaccctcttcttcccttatatacagccgaataaggacctctccctgtcagca
gacagtctgaccatccctgtgtcaaagtgcggcacgtacactaggcctctcattccagag
atgtgcttcagctcagggggagaaaacactgagccgctgcctgccaactcctacattggt
gatgatggcaccagcctgctcatctcctgctccaagtgctgcctgcaggtccatgccagt
tgctatggagtcaggccagaccacgtgaaggagggctggacttgttcacgctgcacagcc
aatgcctggacagtggactgttgcttgtgcaatttaagaggaggagccctccagatgacc
acagacaagaggtgggtgcatgttatctgtgccatagcggtgccagaggctcgttttgtt
aacgccgttgagaggaacccggtcgatatcagcaccatcccagagcagaggaagaacctg
aaatgtgtgtactgttacaagacgatgaagagggtctcaggtgcctgtatccagtgttcc
attgaccgctgctccacctccttccatgtgacttgtgcgcacacagctggggtactcatg
gagcctgacgattggccctacatagtgtccatcacctgccataaacacaagtccaccaat
cagaacctgagccaggccaccaaagaggtctcgttaggacagactgtcatcggcaggaac
cgcaacgggctgtattacaagtgccgggtgatagggacagccacacagaatttttacgag
gtcaactttgaggacggatcctacagtgacaacctctatcccgaaaacgtcattagtcga
gactgcctccagtttgggcctccggtggagggtgaagtcattcaggttcagtggacagac
ggcaacattttcaatgccaagttcatcaccgctcacctcatgaatgtctaccaggtggag
tttgaagatggatctcagctgacagtgaagcgcagtgatcttcacacactggaagaagaa
ctgccaaagaaagtcaagtcccggctgtccctgtcgacagccgttgtgcaggactcttcc
ttctctggggatgaggtcaaagcagccaagcggccccgcctgcccacgccccctccctcg
cccaccccacccccagcccctgccctgccgccgcccctggaggactacggccacggctcc
gactacctggccatcatggagtccctgctgcagacccagttccccccgccggagggccgg
agcagcacgttctag

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