Lepisosteus oculatus (spotted gar): 102691902
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Entry
102691902 CDS
T07349
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102691902 (tbc1d4)
Membrane trafficking [BR:
loc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102691902 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
102691902 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
102691902 (tbc1d4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3350
PID
DUF4249
PTB
Motif
Other DBs
NCBI-GeneID:
102691902
NCBI-ProteinID:
XP_006639447
Ensembl:
ENSLOCG00000011360
LinkDB
All DBs
Position
LG17:complement(32426133..32490636)
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AA seq
1270 aa
AA seq
DB search
MEATDSQDDKTNNPSKSEKRFALWYMGWSPLDRRTTLPMLPWLVAEIRRRRERSEAGSAQ
AREVQIILIPPLIRCVPASNSSSSVFIFEHKAQHISRFIHNSHDITYFAYLIRTQPDNPE
SEMACHVFKASDPNQVPDVISSIRQVSKAALKEDAKTKQEGEEAFYNSQRFEVLYCGKVT
VLHKKAPSTLIDDCVEKFKQHELESKRIKLLNDQRGSTDSVSFIVGEGDPLTPLLSSPPD
RGEGGGAADSVNGNSVLSASASQASLHGSRSAFPECILEDSGFDDQQEFRTRCNSLAAGL
QKKVSDSNLTGPLRRRHASAPSHVQPSDAEKNRTMLFQVGRFEVNLISPDSKSVVLEKNF
KDISSCSQGIKQTDHFGFICREAIESGPSQYVCYVFQCASESLVDEVMLTLKQAFSTAAA
LQNAKTQIKLCEACPMHDLHKLCERIEGLYPPRAKLIIQRHLSLLNDNEQADIFERVQKM
KPSSDQEENELVILHLRQLCEAKQKTHLHIGETPQPNSSNSGLSESVSTSGRFKLDVLKN
KARKSLTNSLENIFSRGASRMRGRLGSMDSYERSSSLASDKDCSPGDSPPTTPPASPVSS
LGQAFPEEDPDSPQFRRRAHTFSHPPSSKKRISFPDSRSQSSRSPIQRQQSVAPELLQSS
PIAISRRTRSVSESDSSSSSIPASFSAPTFLKNLYQASSRPLPLADSGNFKSNGEGRKRT
FSGCSSDSLSAGVPPVTPRRISWRQKIFLRVASPMSKSPAAMQRKDRLDGTELLPLSPLA
PALEKDPLAALLQPEEAFVEKRPRHTAEDLRALWKKAIHQQILLLRMEKENQRLEEASRD
ELHTRKIKLDYQEVGQCPKDVSAAWDKRLSVPGRAKARCDMEEIHSALSQGVPKNRRGEI
WQFLAHQYRLRHRLPCKQQPPDTSYKELLKQLTAQQHAILVDLGRTFPTHQYFSTQLGAG
QLSLFNLLKAYSLLDVEVGYCQGISFLAGVLLLHMSEEQAFEMLKFIMYDLSFRKQYKPD
MVSLQIQMYQLSRLLHDYHRDLYDHLEENEISPSLYAAPWFLTLFASQFPLGFVASIYDL
IFLQGTEVIFKVALYLLSSHESRIMECDSFETIVDFLKSTIPNLTLAQMEKTISQVLEMD
ISKQLHAYEVEYHVLQDEMLEASSPTEDGDRLEKLEKANSQLKKQNMDLLEKLQAARLKI
QSLELTMENFLTRESKMKHLIRSLEQEKAAYQKTIERMRSSLPQDMLSDVELTEIKCGSN
SKAKPGNKKP
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggaagctacggacagtcaggatgacaaaacgaataacccgtcgaagtccgagaagagg
tttgcgctctggtacatgggctggtcgcctctggacaggcggaccacgctgcccatgctg
ccctggctggtggcggagatccgcaggagacgtgagaggagcgaagcaggttcggcccag
gccagggaggtgcagattattctgatcccaccgctcatacgctgcgttcctgcgagcaac
agcagctcgtccgtcttcatcttcgagcacaaagcacagcatatatccagattcattcac
aacagccatgacatcacctattttgcctaccttatcaggactcagcctgacaaccctgaa
tccgagatggcgtgccatgttttcaaggcatcagacccaaaccaggtgcctgatgtcatc
agcagtatccggcaggtgtcgaaggcagccctcaaagaggatgccaagaccaagcaggag
ggagaggaggccttttacaactcccagaggtttgaggttctctactgcgggaaggtgacg
gtccttcacaaaaaggccccttccaccctgattgacgactgcgttgagaagttcaagcag
catgagttggagagcaaacgcatcaagctgctgaatgaccagagagggtcgacagactcg
gtatcttttatagttggagaaggagaccccctgacgccgctcctgagcagcccacccgat
cgcggggagggcggtggggcggcggacagcgtgaatgggaacagtgtcctttcggccagc
gcaagccaagccagcctccatgggtcccgcagtgcctttccggagtgcatcttggaggac
tcagggtttgatgatcagcaggagttcaggacccggtgcaacagcctggctgcagggttg
caaaaaaaggtgtcagatagcaacttgacgggtccactgcgccggagacacgccagtgcg
ccaagccatgtgcagccctcagatgcagaaaagaacaggaccatgctcttccaggtggga
cgttttgaagtaaaccttattagtcctgacagtaaatcagtggtgcttgaaaagaatttt
aaagatatttcttcatgttctcagggcattaaacaaactgatcactttggtttcatctgc
cgtgaagctattgagtcaggtccaagtcagtatgtgtgctatgttttccagtgtgcaagt
gagtctctggtggatgaggtgatgctgactctgaaacaagcatttagtactgctgctgct
cttcagaatgcaaaaacccaaatcaagttgtgtgaagcctgcccaatgcatgacttacac
aaactctgtgaaaggatagaaggtctttacccaccaagagcaaagcttatcatacagaga
catctttccttgttgaatgacaatgaacaggctgacatttttgaacgtgttcagaaaatg
aagccaagcagcgatcaagaggaaaacgagctggtgattctgcacctaaggcagttgtgt
gaagctaaacaaaaaactcatcttcacattggagagactccccagccaaactcatcaaac
agcgggttgtcggagagcgtttctacaagcggcaggtttaaactcgacgttttgaagaac
aaggctcggaagtctctgaccaactctctggaaaatatattttcaaggggagcaagcaga
atgagaggtcgtcttggtagcatggacagttatgagcggtccagcagcctagcctccgat
aaggactgctcccccggggactctccccctacaaccccaccagcctccccagtgtcctcg
ctgggacaggccttccccgaggaagaccccgactctccgcagttcaggagacgagctcac
accttcagccacccaccctccagcaagaagaggatctccttcccagactcccgatctcag
agcagcagatcgcccatccagaggcagcagtctgtggcgcctgagctgctgcagagcagc
cccattgcgatctcgagacgcactcgcagtgtttctgaaagcgattcctcctcctccagc
atccccgcttcgttctcagctcctactttcctgaaaaacctttaccaggcctccagccgg
cccctccctctggccgacagtgggaacttcaagagcaatggtgaaggcaggaagaggacc
ttctcggggtgcagcagcgactccctgagcgctggggttcctcccgtcaccccccgtcga
atctcctggcgccagaagatcttcctcagggtcgcctcgcccatgagcaagtcccccgcc
gcgatgcagcggaaagaccgactggatgggacggagcttctgcctttgtccccgctggcg
cccgctctggagaaggaccccctggccgctctgctccagcctgaggaggccttcgtggag
aagaggcccaggcacacagcagaggatctgagggccctgtggaagaaggccatccaccag
cagatcctgctgctgcgcatggagaaggagaaccagcggctggaagaagccagcagagat
gaactccatacccgaaagataaagcttgattatcaggaagtgggccagtgtccaaaggat
gtttcagcagcatgggacaagagactgagtgttcctggtcgggcgaaggcgcggtgtgat
atggaggagatccacagtgcgttgagtcaaggtgtaccaaagaatcgacgtggggagatc
tggcagtttctggctcaccagtatcgcctgcgacaccggcttccctgtaaacagcaacct
ccagacacttcttataaagagctcctgaagcagctcactgcacagcagcatgccatcctt
gtagatcttggacggacatttcccactcaccagtacttctccacgcagctgggtgccggc
cagctgtcactcttcaatcttctgaaggcttactctttgctggacgtggaggttggctac
tgccagggaatcagctttttggctggggtgctgctgttacacatgagtgaggagcaggct
tttgagatgctcaagttcataatgtacgatttgagcttccgcaagcagtacaagcctgac
atggtctccctgcagatccagatgtaccagctttcccgactgctccatgactaccacagg
gatctgtacgatcacctagaagagaatgagatcagcccaagcctttatgctgctccctgg
tttctcactctctttgcttctcagtttcctctgggctttgtggccagcatttatgatcta
atatttcttcaggggaccgaagtgatatttaaagtggctctgtatttgctgagtagccat
gaatcgcgtattatggaatgtgacagctttgagaccattgtggactttctgaagagtacc
atcccaaatctgaccttagctcagatggaaaagacaatctcccaggtgttagagatggac
atttccaagcagctccacgcatatgaggtcgaatatcatgtgctacaggatgaaatgctg
gaagcatcttcacctactgaagatggggacagattggagaaattagagaaggccaacagt
cagctcaagaagcagaacatggacctgcttgaaaaactacaggctgcccgtcttaaaata
cagagcctggaacttaccatggaaaactttctaactcgggagagtaaaatgaagcacttg
attcgttcactggagcaggagaaggcagcctaccaaaagactatagagcgcatgcggagc
agcctgccacaagacatgctgtctgatgtcgaactgacagagattaagtgtggctcaaat
agcaaagcaaaaccaggaaacaaaaagccatga
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integrated database retrieval system
