Lepisosteus oculatus (spotted gar): 102691954
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Entry
102691954 CDS
T07349
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loc03036
]
102691954 (chd1l)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102691954 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
AAA_22
SWI2_SNF2
SLFN-g3_helicase
ERCC3_RAD25_C
L27
Motif
Other DBs
NCBI-GeneID:
102691954
NCBI-ProteinID:
XP_015217258
Ensembl:
ENSLOCG00000010574
LinkDB
All DBs
Position
LG14:complement(25270453..25297853)
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AA seq
1053 aa
AA seq
DB search
MSNFLHTIKQNIPQKDPEWAVQEKDLRQWGLTGIKLRSYQLAGVGWLTQCLKNQQGCILG
DEMGLGKTCQTISLLLYVSGAKKDQGPFLVLSPLSVMTNWTEELQRFAPSLSVVCYSGNK
DTRAELQKDLRNKQFHVLLTTYEICLKDASFMKRWQWRVLVVDEAHRLKNQNSLLHRTLS
EFSVGFRLLLTGTPIQNSLQEVYSLLSFIQPSIFPQEEGDSFINTYSPVQSQPELASELH
SVLQPFLLRRVKAEVAAELPKKTEVVVYHGMSALQKKYYKAILTRDLDAFENKQGSKTRL
LNILMQLRKCVNHPYLFDGVEPEPFEMGDHLIEASGKLHLLDSMLAFLHQRSHRVLLFSQ
MTRMLDILQDYMEYRGYSYERLDGSVRGEERNLAIKSFSHQDVFVFLLSTKAGGVGMNLT
AADTVIFVDSDFNPQNDLQAAARAHRIGQTRPVKIIRLLGRDTVEEIVYRRAASKLQLTS
TVIEGGQFSLLEQAEAASAGLQPECSAASQTGVACVSDLCALSSCVLRADLSPSAERDPQ
VWSGQAALVGGELHAGRGPGDDPGTNPAGPALCSTEISNPSKEATQHRARNRADAIRSAI
CGTQHRQSNKNEAHMYLYEGKDYSKDPSAEDQRSFEQLLDLQRALTEKAGTEGRALRNKS
SVLLSGPLGAPLRRKRVLSEEELEQRRQRRKEAAAKRAKLREERQQQREEQQHKKKMAWW
ESRGYRSLCVPSEDSEEEEGGEEDNVSLASTDSEHTGLRYVLGDVTHPEAAREDAIIVHC
VDDYGHWGRGGLFTALEVRSDEPRRKYELAGKMKDLDLGSVLLFPIDDKESRMDGQDLLA
LIVAQHRDRSNSLSGIKLTALEEGLKKIYRVAKRKKASVHLPRIGHSTKGFNWYGTERLI
RKHLASRSIPTYIYYYSRKSSSVMSSASARASRGSGPPGSTEAAGSSAQSDPQSSTSMAE
FMSGVQVYFYNIAASDRKRLGQFLVTYSGSEDEVMSAEVTHIVAEVESPLHTQELQALRT
QYPQALPVQKSWLEACFSQQRKVSPAQHQIDLN
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaactttctccacactatcaaacaaaatatcccacagaaggatcccgagtgggcc
gtacaggagaaggacctgaggcaatggggcctgacagggatcaagctgaggtcctaccag
ctggctggcgtgggctggctgactcagtgcctgaagaatcagcaaggctgtatccttggg
gacgagatgggcctgggaaaaacctgccaaactatctccctgctgctgtatgtatccggg
gcaaagaaagatcaaggtccctttctggttctgagcccgctgtccgtgatgaccaactgg
acggaggagctgcaaagatttgccccaagcctgtccgtggtttgttactctggaaataag
gacacaagagctgagctgcagaaggatctgaggaacaagcagttccacgtactgctcact
acctacgagatttgtctcaaagatgcctcattcatgaaaaggtggcagtggagggtgctt
gttgtggacgaggcccacaggctgaagaaccagaactctttactgcacagaaccctgtcc
gagttttcggtagggtttcgactgctcctgaccgggacgcccatccagaacagcctgcag
gaggtctactcattgctcagcttcatccagcccagtatcttcccccaggaggagggggac
tccttcatcaacacctactcaccagtgcagtcccagcccgagctcgctagtgaactgcac
agtgtcctgcagcctttcctgctgcgcagagtcaaagctgaggtggcagcagagttgccc
aagaagactgaggttgtagtctatcatggcatgtcagctctccagaagaagtactacaag
gccatcctcaccagagacctggatgcatttgagaacaaacagggaagcaagacgaggcta
ttgaacatactcatgcagctgaggaagtgtgtcaaccacccatacttattcgatggggtg
gagccggagccttttgagatgggagaccacctcatcgaggccagcgggaagctgcatctc
ctggacagcatgctggccttcctgcaccaaaggagccatcgagtgttgctgttctctcag
atgacacggatgctggacatcctgcaggactacatggagtacagaggctacagttacgag
cggctggacgggtccgtgcgcggagaggagcgtaacctcgccatcaagagcttcagccac
caggacgtgtttgtgttcctcctgagcaccaaggctgggggagtggggatgaacctgaca
gccgcggacacggtgatctttgtggacagcgacttcaacccccagaatgacctgcaggct
gcggcccgtgcccacaggattggacagacaaggccggtgaaaataatccgcctgcttggg
agggacacagtggaggagattgtgtaccggcgcgccgcctctaagctgcagctcaccagc
acggtgatcgagggagggcagttctctctgctggagcaggcagaagccgcctcagcaggt
ctccagcctgagtgctcagcagcaagtcagactggagtagcatgtgtcagtgacctgtgt
gctctttcttcctgcgtcctgcgggcggatctgtccccgtcagctgagcgagatcctcaa
gtttggagtggacaagctgctctcgtcggaggagagctccatgcaggacgtggacctggg
gatgatcctgggacaaacccagcagggccggcgctgtgctctactgaaataagcaaccct
agcaaggaagcaacacaacacagagcccgaaacagagcagatgcaatcagaagtgccatc
tgcggcacccaacacagacagtccaacaagaatgaagcacacatgtatctatatgaaggc
aaggactactccaaggaccccagcgcagaggaccagaggagctttgagcagctgctggac
ctgcagagggctctgacggagaaggcagggacagaaggacgagctctccggaacaaatcc
agtgtcctcctgtccggccccctgggggctccgctccgcaggaagagggtgctgagcgag
gaagagctggagcagaggcggcagaggaggaaggaggccgcggccaagagggccaagctg
cgggaggagaggcaacagcagagggaggagcagcagcacaagaagaagatggcatggtgg
gagtccagagggtaccgttctctgtgcgtgccctcggaggacagcgaggaagaggagggc
ggggaggaagacaatgtgagcctggcctccacagactcggagcacacggggcttcgctac
gtgctgggggacgtgactcaccctgaggccgcccgggaggacgccatcatcgtgcactgc
gtggatgactatgggcactggggcagaggcggactcttcacggcgctggaggtccggtca
gatgagccccgcaggaagtatgagctggctggcaagatgaaagacttggatctcggtagt
gtgctgttgttccccattgatgacaaagagtccaggatggacgggcaggacctactggca
ctgatagtggcacaacaccgcgatcgctccaacagcttgtccgggatcaagctcacggct
ctggaagagggcctgaaaaagatctacagggtggccaagaggaagaaagcaagtgtccac
ctgccacgaatcggacactccaccaaagggtttaactggtacggcacagagaggctgatc
cgcaagcacctggcctcccggagtattcccacctacatatattattattccaggaagagc
tcctccgtgatgtcctcagcctctgcccgcgcatctcgtgggagtggtccgcccgggagc
actgaggcagcgggcagctcagctcagagtgacccgcagagctctaccagcatggctgaa
ttcatgagtggagtccaggtgtatttctacaacatcgccgcttcagatcggaagagactg
ggccaattcctcgttacatacagcggcagcgaagacgaggtgatgagcgctgaagtcaca
cacattgtagctgaggtggagagtccattgcacacgcaggagctgcaggcactccggacg
cagtacccacaggccctccctgtacagaagagctggctggaggcctgcttctcccagcag
aggaaggtcagcccagctcagcaccagatcgacctgaactga
DBGET
integrated database retrieval system
