Lepisosteus oculatus (spotted gar): 102692022
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Entry
102692022 CDS
T07349
Symbol
cacna1e
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04010
MAPK signaling pathway
loc04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102692022 (cacna1e)
04020 Calcium signaling pathway
102692022 (cacna1e)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
loc04040
]
102692022 (cacna1e)
Ion channels [BR:
loc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102692022 (cacna1e)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
102692022
NCBI-ProteinID:
XP_015211892
Ensembl:
ENSLOCG00000009682
LinkDB
All DBs
Position
LG10:23358415..23694942
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AA seq
2408 aa
AA seq
DB search
MLELGTCSVSAHTLSDHNALGVPQLGSTPHRYMLPPPEAESWHKHRLGLTQGSRSCSLLE
PESLSDSLLSRTASFDALYELRAREADTSFPFDGGVSFEVPTLGLDPAMPVSPHLIKRRR
GGLIEQKDIIKAHEAHKMQSTPQAKRKEWEMARFGDDVAGRLGSGDGGSERSRNRQGVAV
SSGGVSAAFKQSKAQRARTMALYNPIPVRQNCFTVNRSLFIFGEDNIVRKYAKKIIEWPP
FEYMILATIIANCIVLALEQHLPGDDKTPMSKRLEKTEPYFIGIFCFEAGIKIVALGFVF
HKGSYLRNGWNVMDFIVVLSGILATAEAQINTHVDLRTLRAVRVLRPLKLVSGIPSLQIV
LKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSGKLHHTCTQAPNILDNETVDGSELEF
PCGFRECPKKYNCTPDWIGPNDGITQFDNILFAVLTVFQCITMEGWTTVLYNTNDALGPT
WNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERERVENRRAFMKLRRQQQIERELNGYRA
WIDRAEEVMLAEENKNSGTSALDVLRRATIKKSRMEVIRREPSEDQYADISSVGIPLARA
SIKSAKFGGASYCRRKERMLRISIRRMVKSHTFYWTVLSLVALNTLCVAIVHHRQPEWLS
TFLYYAEFLFLGLFLTEMFLKMYGLGPRLYFHSSFNCFDCGVIVGSIFEVVWGFFRPGMS
FGISVLRALRLLRIFKITKYWASLRNLVVSLMNSMKSIISLLFLLFLFIVVFALLGMQLF
GGRFIFEDYTPTNFDTFPAAIMTVFQILTGEDWNEVMYNGIRSQGGVRSGMWSSIYFIVL
TLFGNYTLLNVFLAIAVDNLANAQELTKDEEEEEEAFNQKHALQKAKEVSPMSAPYLMAA
ERKRPFLYRKRAIHRSRHTFKIEAVGNLEALPDAQPLNAPNYFMSRRERRRRMTMSVWEQ
RTSQLRRRRQMSSREILFSNPGEDLERSASCPRHRKPIATDSLRRIPEPPIPEPEPLPGP
EEKLGITNHCQPPKEGRQSPRANGERSHRSTRRNRMALGEGAATEEGARARRSSRHRHRE
RMEGKGKDSPHSEGSRSVSRERRLEEPERDLGEAKNGGNGKIECEGEQSRLNETTPEPTE
TKPVTNSPKMEEQDVNEVLKSDNPPLQPSKDTTMKPETGGEVPPDTVGMSESENNPALLN
QDKPSLNASIVIEVTGVQSPLELTPIAANSKDVEAAKTEKEEDGCSGPKPANPDSMFIFK
ASNPIRKACHYVVNLRYFEMCILLVIAASSIALAAEDPVSTNSEWNKVLRYFDYVFTGVF
TFEMIIKMIDQGLILHDGSYFRDLWNILDFIVVVGALIAFALTNVMGNNKGRDIKTIKSL
RVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFY
CTDGSKDTEKECQGFYIDYEKDKKEVKKREWKRHDFHYDNIIWALLTLFTVSTGEGWPQV
LQHSVDVTEEDRGPSRGNRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEEC
SLEKNERACIDFAISAKPLTRYMPQNRQTFQYKVWHFVVSPSFEYTVLAMIALNTVVLMM
KYYSAPTTYDQVLKHLNTAFTVLFSLECILKIVAFGFLNYFRDTWNIFDFITVLGSITEI
VLTDFQLPNTFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFF
IYAIIGMQVFGNIKLNDESHINQHNNFKTFFSALMLLFRSATGESWQEIMLSCLSGKGCE
TDPSSNSSTPIIKSDCGTDFAYFYFVSFIFFSSFLMLNLFVAVIMDNFEYLTRDSSILGP
HHLDEFVRIWAEYDRAACGRIHYTDMYEMLTHMSPPLGLGKKCPAKVAYKRLVLMNMPVD
EDMSVHFTSTLMALIRTALEIKIARGGEDRQQLDAELQKEINVIWPHLSQKSLDLLVPIH
KASDMTIGKIYAAMMIMDYYKQSKAKKQRQQLEEQKNAPMFQRMDASSLPQEILSSAKAL
PFLQQSTGSGLTRGGFVALSPISPQEMFIHPRSPDMEMKEDFHAHHSLVPERKEFNGLLC
PTNRQCVPLDVPGRAVSIRASSLPRLAVEAQVMTDSSTMKRSFSTIGDQRVNGLWLDEYS
LERVSPDRLYRPRQRSYRGSGLKSDHRQPGDRERGRSKERRHLLSPDVSRCNSEERSQHH
SRERKHSRSPSEGRSHTPHRQGTSSDSPVPSTSESSTPRGRRQLPQTPSRPRPHISYSPL
VRRAHPSPPGDGSSPRTQEAECGDQAWGEGATSGQGGSHRSTPHRYISEPYLPLHEDYNS
PDSAGLEETLTFEAAVATSFGRSNTISSAPPLRHSWQVPNGHFRNRLSQSSSVAGCELFS
DTDEDDRC
NT seq
7227 nt
NT seq
+upstream
nt +downstream
nt
atgctggagttgggcacttgttcagtcagcgctcacacgctttcagaccacaatgccctg
ggagttccacagctgggcagcaccccccaccgctacatgctgccaccaccagaggcagag
agctggcacaagcatcggctgggcttgacccaaggctcccggtcctgctccctgctggag
cctgagagcctctcagacagcctcctgtcccgcaccgccagcttcgacgccctgtacgag
ctgcgcgcccgcgaggccgacaccagcttcccctttgatggaggagtttcctttgaggtg
cccacgctgggcctggaccctgcgatgcccgtcagcccccacctcatcaagcgccgccgt
gggggtctcattgagcagaaggacatcatcaaagcccatgaggctcacaagatgcagagt
acccctcaggccaagcgcaaggagtgggaaatggctcgttttggagacgacgtggccggc
aggctgggatccggggatgggggctccgagcgcagcagaaacaggcaaggagtggcggtg
tcttcgggtggagtttcggcagcctttaaacagtcaaaagcccaaagagcccgcaccatg
gctctctacaaccctatccctgtcaggcaaaactgtttcactgtcaacagatctctgttc
atttttggagaagacaacattgttagaaaatacgcaaagaagatcattgagtggcctcct
tttgaatacatgatcctggctaccatcatagcaaactgcattgttctggctctggagcag
caccttcccggagatgacaagacacccatgtcaaagagactggaaaaaactgagccctac
tttattggaatcttttgctttgaagctggaattaaaatcgtggccttagggtttgtgttc
cacaaaggctcctatctgcggaatggctggaatgtgatggacttcatcgtggttctcagt
ggcatcctggctacagcagaagcacaaattaacacgcatgtggacctgcggacactgagg
gctgttcgggtactgagaccactcaagctagtctccgggatccccagtctccagattgtc
ctgaagtccatcatgaaagccatggtgccactacttcagatcgggcttctgctgttcttt
gccatcctcatgtttgcgataattgggctggaattctacagtggaaaactgcaccatacc
tgcactcaggcgcccaacatcctagacaatgaaaccgtggatggatctgagttagaattt
ccctgtggatttagggaatgtcccaaaaaatataactgcactccagactggatcggtcca
aatgatgggatcactcaatttgacaacatcttatttgctgtgctgaccgtcttccagtgc
atcacaatggagggatggacaacagttctttataataccaatgatgccttaggcccaaca
tggaactggttgtattttatccctctaatcatcattgggtccttttttgtacttaacctc
gtgctgggagttctttcaggggagtttgccaaagaaagggagcgggtggagaaccggaga
gccttcatgaagctgcgcagacagcagcagattgagagagagctgaatggataccgagcc
tggatagacagagcagaggaagtgatgctcgcagaagaaaataaaaattcagggacatca
gcattggatgtgctcagaagagcgactatcaagaaaagccgcatggaagtgattcgcagg
gagccaagtgaagaccagtatgctgacatctcatctgtaggcatccctcttgcaagggcc
agcattaagagtgctaaattcggcggagcctcgtactgccggaggaaagaacgcatgctc
cgcatttccatccgccgcatggtcaaatcacacactttctactggacggtgctcagtttg
gtggccttgaacacactgtgtgtcgccattgtgcaccacagacagcctgagtggctttcc
acttttctatactatgcagaattccttttcctaggactctttctcaccgaaatgtttcta
aaaatgtatggcctgggaccacggctctacttccattcatccttcaactgctttgactgt
ggagtgatcgtcggcagcatctttgaagtggtctggggattctttcgccctgggatgtct
ttcggaatcagcgtccttcgagctctgaggctgctgaggatcttcaagatcacaaagtac
tgggcttctctaaggaaccttgttgtatccttgatgaactccatgaaatcaatcatcagc
ctgctcttcttgctcttcctcttcattgtggtctttgccctgctgggaatgcagcttttt
ggtggcaggttcatctttgaggattatactccaaccaactttgacacatttccagcagcg
attatgacagtgttccagatcctgactggagaggactggaatgaagtgatgtacaatggg
atccgctcacaggggggagtgaggtcgggcatgtggtcctctatatacttcattgtgctc
actctgtttggaaactacacattgctgaatgtgttcttggccatcgctgtggacaatttg
gccaatgcccaggaactgaccaaggatgaagaagaggaagaggaggccttcaatcaaaag
catgccctgcagaaagcaaaggaagtcagccccatgtccgccccgtacctcatggcagca
gagagaaaaaggccctttctgtataggaaaagagcaatccacagaagtagacacaccttt
aagatcgaggccgttgggaatctagaagctctgcccgacgcccagccgctgaatgcccct
aactattttatgtccaggagagaaaggagaaggagaatgaccatgtcagtatgggagcag
agaaccagtcagctgaggaggcgaaggcagatgtctagccgggagattcttttcagcaat
cccggtgaagatctggagaggtcagccagctgcccaagacatagaaaacccatagccaca
gacagcttgagacggatccctgaaccccctatccctgagccggaaccccttccaggcccc
gaggagaagcttggaatcactaaccactgccagccccccaaggaaggccgacagagcccc
agagccaatggagagaggagccatcgttcgacccgccggaaccgcatggcgctaggagag
ggggcagccacggaagagggggcgagggctcgcaggagcagcaggcaccggcaccgagag
cgaatggaagggaagggcaaggactcgccccacagcgagggcagccgttccgtcagtcgg
gagaggaggctggaggagccggaacgagatttgggagaggcaaagaatggggggaatggc
aaaatagagtgtgagggcgagcaaagtaggttaaatgaaaccacccctgagccgaccgaa
acaaagcctgtgacaaactcgcccaaaatggaggaacaagatgttaatgaggtcttgaag
agtgacaacccccctctccagccctctaaagacaccacaatgaaacctgagactggtggg
gaagtcccccccgacaccgtgggaatgagcgaatctgaaaataatcctgccttgttgaac
caagacaagccttcactaaatgccagcattgtcattgaagtgaccggcgtccagtcccca
ttggagctgactcctatagcagccaacagtaaagatgttgaagcagcaaagactgagaaa
gaagaggacggctgtagtggtccaaagccagcaaaccctgacagcatgttcatcttcaaa
gcttccaacccaataagaaaagcctgtcactatgttgtgaacctgcggtattttgagatg
tgcatcctgttagtaatcgcagcaagcagcattgctctggctgcagaagaccctgtctct
accaactccgaatggaacaaagttctacgttactttgactatgtcttcaccggagtcttc
acatttgagatgattataaagatgatcgatcaaggcttgatcctgcatgatgggtcatac
ttccgggatctctggaacatccttgatttcatcgttgtggtgggagctctgatcgccttc
gctttaacgaatgtgatggggaataacaaaggccgggatatcaaaactatcaagtccctg
cgtgttctaagagtcctgcgtccactcaagacaatcaagagactcccaaagctaaaggca
gtgtttgactgcgttgtgacctctctgaagaacgtctttaacatcctgattgtctacaag
ctcttcatgttcatctttgctgtgattgccgtgcagcttttcaagggcaagttcttctac
tgcactgatggctccaaagacacagagaaagaatgccagggattctatattgattatgaa
aaggacaagaaggaagtaaagaagagggaatggaagaggcatgactttcactatgacaac
atcatctgggctctgttgacccttttcaccgtttccacaggagaaggttggcctcaggtt
ctgcagcactcggtggatgtcacagaggaggaccgcgggcccagtcgaggaaaccgcatg
gaaatgtccatattctatgtggtctattttgtggttttcccattcttcttcgtcaacatc
ttcgtggctcttatcatcatcactttccaggagcagggtgacaagatgatggaggagtgc
agcctggaaaagaatgagagggcctgcattgattttgcaataagtgccaagcccctgact
aggtacatgccccagaacagacagacctttcaatacaaagtgtggcactttgttgtctct
ccttctttcgaatacacagtgctggccatgattgctctcaacaccgtcgtcctgatgatg
aagtattattctgctccaacaacatatgaccaggtcctgaagcacctgaacactgccttc
actgtgctcttttcactggagtgcatcctcaaaattgtggctttcggatttttgaactac
ttccgggatacctggaacatatttgatttcataacagtcttgggcagtattactgaaatc
gtgcttacagatttccagttaccgaacactttcaacatgagtttcctgaagctgttccgt
gctgcccgtctcatcaaactcttaagacagggatacacaattcgcattctgctctggact
tttgtgcagtccttcaaggcacttccttatgtctgcctactgatcgccatgcttttcttt
atatatgcaattatcgggatgcaggtatttggtaacatcaaattgaatgatgaatctcat
ataaaccagcacaataactttaagactttcttcagtgctctaatgcttctgttcaggagt
gcaacaggggagtcctggcaagagatcatgttatcctgtttgtcaggcaagggatgtgag
acagacccttcttccaattcctccacacctataattaaaagtgactgcggcacagatttt
gcctacttttacttcgtctccttcatcttcttcagttcctttttgatgttgaacctattc
gtagccgtaatcatggataactttgagtacttgacacgggactcatccattttggggccg
catcatctggatgaatttgttcgtatctgggccgaatatgaccgagcagcatgtggccgt
attcattacactgacatgtatgagatgctgacccacatgtctccaccgctaggcctcgga
aagaaatgtcctgccaaagtcgcttataagaggttggtgctaatgaacatgcctgtagac
gaagacatgtccgtgcactttacctccactttgatggcgctgatccggacagcactggag
atcaaaatagcaagaggaggagaggacagacagcagctggacgccgagttgcagaaggag
attaatgtcatctggccacatctctcccagaaatcattggacctcctagtacccattcac
aaagctagcgacatgaccattgggaaaatctatgctgcaatgatgataatggattattac
aagcaaagcaaagctaaaaagcagaggcaacagcttgaggagcagaaaaacgctccaatg
tttcagcgaatggatgcttcatcccttccacaggagatcctgtcaagcgccaaagctctg
ccctttctgcagcagagtacaggctcagggctgaccagaggtggatttgtggctctgagc
ccaatctcccctcaggagatgtttattcatcccagatctccggatatggagatgaaagaa
gacttccatgcacaccactctctggtgccggagcgaaaagagtttaatggcctgctttgc
cccactaacaggcagtgtgttccccttgatgtcccagggcgggcagtatcaatccgagcc
tcctctttgcctcggctggcagtagaagcacaggtcatgacggacagcagcacaatgaag
cgttctttttccactattggggaccagcgtgtgaacggactgtggttggatgagtattcc
ctggaaagagtcagtcctgaccgtctgtacagacctcgacagcggagctacaggggttct
ggtttaaaatcggaccaccggcagccaggggacagggaaaggggccgatccaaagagcgc
agacacctgctgtcccctgacgtgtcccgctgtaactctgaggagcgcagccaacaccat
tcccgggaacgcaagcattccaggtcccccagtgagggcaggtcacacacgccccacaga
cagggcaccagctcggacagtccagtcccctccacatcggaatccagcacgccacgcggc
cggcgtcaacttccccagacaccctctaggccacggccacacatctcctattcgcccctg
gtgcgccgtgcccacccttccccgccaggtgatgggagcagcccgcggacccaggaggca
gagtgcggggaccaggcctggggagagggggccacatctgggcagggtggtagccaccgc
tccaccccgcaccgctacatctccgagccttacctgcccctgcacgaggactacaacagc
cccgactctgccggcctggaggagacactcactttcgaagccgctgtggccacgagcttt
ggacgctccaataccatcagctcggcgccgccactgcggcacagctggcaggtccccaac
gggcacttccgcaaccgcctctctcagtccagctcggtcgctggctgcgagctgttcagc
gacacagacgaggacgaccgctgctag
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integrated database retrieval system
