Lepisosteus oculatus (spotted gar): 102692066 Help Entry 102692066         CDS       T07349                                  Symbol dchs1 Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism loc  Lepisosteus oculatus (spotted gar) Brite KEGG Orthology (KO) [BR:loc00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:loc04515]     102692066 (dchs1) Cell adhesion molecules [BR:loc04515]  Cadherins   Cadherin related    102692066 (dchs1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th Fibulin_C RET_CLD1 Cadherin_4 TMEM154 CADH_Y-type_LIR LapA_dom PepSY TCL1_MTCP1 EphA2_TM RIFIN Motif Other DBs NCBI-GeneID:  102692066 NCBI-ProteinID:  XP_015197422 Ensembl:  ENSLOCG00000008672 UniProt:  W5MQ96 LinkDB All DBs Position LG3:complement(15059452..15221587) Genome browser AA seq 3282 aa AA seqDB search MDPLHKQGTWSKKMLLLFYVALELITVHSSTVLGTLDLQLDEEQPAGTIVGDISAGLPPG TMATLFFISDHEGTGVGSDLDIDETTGIIKTAKVLDREVRDHYNFIAVTMHGLTVEVTIV VNDINDHAPEFPKKRVTFKIPEHTAVGTRFSLDPAADADKGQFTTQGYLIKDGNMGQAFR LETKRGSNEVLNLDLVVNAILDREKRSSYTLHLEAFDGGSPKKTGQMILDVSVQDINDHA PVFNQSRYHALISENMQPGNTILQVFATDADEGDNGLVLYEINRRQSDPEHYFVIDPRTG VITLNKPLDYEMRKVHELVVQARDNASHPEVTNAFVTIHVRDYNDNQPTMTIIFLSEDGS PRISEGAQPGQYVARISVSDPDYGEYPNVNVTLEGGDGKFGLTTKDNIIYLICVDKILDR EERDSYELRVFATDSGTPPLRAESSFTIQVTDVNDNPPLFDQQAYKQTIPEVVYPGSFVL QVTARDKDQGPNGEINYSILQDHGTHSDWFTIDPVTGIITTAMELDYETDPKPRITVVAT DGGRPPLSSTAVVNVVLQDINDNEPVFGSNFYNVSIKENTAAGTCFLQVTATDADGGSFG TISYSIGSGLGSVTPTQFTIGKETGQICTKVALDRDLGTTSYDFTVTAVDGGGLNSMAYV KVFLVDINDNRPTFYPVHYAVSLSTQSAPGTSVVRVTAYDHDEGENGRVTYRTVPGGSSQ YFTLNKDTGVISLSRSLHGKANSVIQMVITAQDGGGLMAPVNARVNISVVAGSVAPPVFE QAHYFFTVSEDVLRGTQVGVVRAMSRNGESKDVFYTISSGDPDGYFTVDSETGALRTSLP LDHEARPSLELEVQARSGMPPAFGQTRVRITIADVNDNAPSFLPSSSESLLLPEATKMGT VVYRVRAEDRDSGPNGQLSFDLASTGGQRTFGIERSSGEIRLIGSLSYETTPRYDLQVTA KDSGVPQLSATFTLVVHVQAENNQGPVFDTLTYRVELKEGTPLNTRFLQVRALNQEAASS PTGSTASSSPLAYHLRPDGDAAGFGIASDSGWLFVKSALDREAKDLYLLTVLATSGSGQL KKTGSATVRVSVTDENDNSPRLAQERAFLAVRENLPEGTGFGRVSATDRDAGLNSRLTFR LLHPDRNFQINSQTGEISTRTALNREHQSSYQLVVVVQDGGTPPRSATGTAHITVLDEND NAPSFTHAKPGRDLLMQVQEGKPSGTLIGTVQAKDPDEGENGTIYYSLSGPRAERFSLNP NTGELRSSSPLSRTERAEYSFTVTATDRGQPAQSTSTTLIIQVLSSSKMVPKPNTHAVTL KSIEGAKPGSVVGSVRSHDQQVMHEEGQVTYTVVGGTDQEGTFMVDRLTGDVYLARELDY EQGTRYTLQIEVDDFSKAYPTSRIITLDIDVQDSNDHAPQFPEDPVTIVIPENMEPGSSI YAFQAIDKDGSGPNSEIRYTILHQWPDNSDLLSLDPSTGVLSLGQILDCETTSSLFLVVK ATDCALNASQRHWGSVTARIFVTDENDNAPVFSSPTAVSVMEDQPVGFVVLYVMAQDADQ GENGRVSYRIQAGNAGGRFSLNPNTGSLSILKALDREEQALYNLTIVAEDHGTPQHSTTQ LLSVQVIDVNDEAPWFSKTEFEAQISENQRAGTSILTVSAVDRDQGTNGLVTYGGIAEEA FTVDPITGVISSTKALDRETQERYTVTVYAKDGGMPPNFAKATIRISILDENDNTPAFGK DMYNLEVPENLQPVELFTLKATDLDTGDNGEVEYKIIDGDPTSDFHLDSSSGVLSTSKPL DRERRASYSLTIVAQDHGKHKLSSTAKVEVMVLDVNDNSPRFGQSVYNIDISENASVGRL VLEVTATDEDEGSNGKVLYFLSSEARGMFDVDQNTGRITTTGPLDREKRAAYKFLVCAVD SSPSAPRNTTAEVTVTIQDVNDNAPFFIQDPLIINISSNSVSNHQVVATMRAEDKDFGAN GSIFYRFATPARGFTINSLTGDIQVTEKLLTLSQKQRTLLIEAMDQGTPARSSIGVVVIY VKEEDYKGIRFSRNTRDVSLPENAALGTAVVQIQAQHPDGSNRGITYSIFSGNRLESFRI SASTGEIWVQSSTGLDFEETPRLRLVVKAETPSSSSFMAVNLILQDVNDNLPRFQLQNYI AYLREAQGYDFPIIQVLADDPDQGQNGQVTYSIQSSSMSGLFKIDPLTGSITTAAIMDRE IWTQTKLVVAATDRGSPRLAGTATLTVVIVDLNDNSPTIPLPREVRVPENTLIGTEITQV TGNDVDSGPALSYMLQLDSKSLGKFGIHRYGGGISLTAPLDYEERTWYTLTVRSSDSKHE SEANLTVLVEDVNDNAPVFTQDLYQVTLPEHSPPGSPVVTVTATDRDSGKNGKVTYRVMS SSRDGFYIDPSNGTLFISQEAKFDPDRLAVSVVIEARDGGTPTLSSITTVQVQVSDVNDN APTFHQSEYRATVSEDGMPGSTILTLEAVDGDLSRENCGFDFAIASGNAGNAFQIESSVR FIEGRGFQTVGTLILVERLDFEFVSQYNLTIVASDRGVPQMSSSVPAVITITDTNDNPPA FGRAEYSVAVNEGVGPGTEILRLSASDPDSAPNAEIQYAISSGDEMELFTVDRWTGALRL QQSLDREMKSSHVVIVQASDGQGHYALAPVTVEVKDVNDNKPYFPLETLIASIQENQPPN SLVTILHAVDFDTGVYGQLRYYMVDKTGEGKDSFLVEQNSGEIRARSTLDFEKVKSFRFV ALALDSGNYSTTVTVQVYVTGEDEYDPVFTSSEFAFEVPEGAKKGQSIGQVQASDEDEGV DGIVLYSFASDTPYFGINATTGVVYLKMDSQSRHSSAGRSKREARQMTLDIEAHSPLESS RVTTAQITIDVTHTSFGLASDVNILLVIVIAASLGAVVILIVIAVALLMVRSRRKRKQEE SSSRTAPPGTALQKLDEAKLSGGERIYHQTLPGYTGEQGGTGGGSYTRGGSLDPSHSSGR GSAEAEAAEDDEIRMINEYPRVSSISSSMQDHLSTRGPDSGIQQDADQLSDISCEPGMEA GHWFKGKKIGSLSGTLLSGQHPVYRDEGGGYLGVGRGLNISHPKDYAFPEDGKPSIDGSL TAIVASDEELRGSYNWDYLLNWCPQFQPLASVFTEIARLKDESAPPNPRRPFQPKAKADP KPRIDPPPLITSVAHPGAKTVPPKPAIGRTFPHLASLRRSPISHEGSISSAAMSPSFSPS LSPLAARSPAVSPFGVTQGPSASMISTAEHSLDHPEEAEMSI NT seq 9849 nt NT seq  +upstreamnt  +downstreamnt atggatccattgcataagcagggtacttggagcaaaaaaatgctgctactattctatgtg gccttggaactcataactgtccactcctccactgtcttgggtacattagacttgcagttg gatgaagaacagcctgctggaactattgtaggtgacatcagtgctgggctgccccctggt accatggctacactgttcttcatatctgatcacgagggcactggggttggtagtgatttg gacattgacgaaacaactgggatcatcaaaacagccaaggttttggacagggaggtgaga gaccattacaactttattgcagtcaccatgcacggactgacggtagaggtaacaatagta gtaaatgacatcaatgaccacgcaccagaatttcctaagaaaagggtcacgttcaagatt ccagaacacacagcagtgggcacaagattttctcttgatcctgcagcagatgctgataaa ggtcagttcaccactcagggttatctgataaaagatggcaacatgggacaggctttccgc ttagagactaagaggggctccaatgaagttttaaatttggatctagtagtcaatgccatc ttagacagagagaaaaggtcttcgtacaccttgcacctggaagcttttgatggcggttct cctaagaagactggacagatgatcttggatgtttctgtccaagacatcaatgaccatgca cctgtcttcaaccagagtcgctatcatgccctcatttcagaaaacatgcagcctggcaac accatattgcaggtgtttgctacagatgcagatgaaggggataatggactggtgctatat gagatcaacaggaggcaaagcgaccctgagcactattttgttatagatccacgcacaggc gtaatcactctcaataaaccactagactacgaaatgaggaaagtccatgagttggtggta caagcccgggacaatgcaagccatccagaagtcaccaatgcttttgtcaccatccacgtc cgtgattacaatgacaaccagcccacaatgaccatcatcttcctcagtgaagatggctcc ccacgcatttctgagggagcacaaccaggccagtacgtagcgcgtatctcagtgtcagac ccagattacggcgaataccccaatgtaaatgtgacattagaaggtggagatggtaaattt ggtctgacaacaaaggataacatcatctacctcatatgtgtggacaaaatcctagatcga gaagagagggattcttatgagctgcgggtatttgccactgactctgggactccccctctc agagctgaatcatcgttcactattcaggtgactgacgtcaatgacaaccctccacttttt gaccagcaggcttacaagcaaaccattccagaagtggtgtaccctggaagctttgtcctt caggtcactgcgagagacaaagaccagggtcccaatggtgaaatcaattacagcattctt caagaccatgggacccattcagattggtttactattgacccggtcaccggaataatcacc acggccatggagctggattatgagacagatcccaagccgaggatcacagtggtggccact gatggggggcggccacctctgtcctccaccgctgtggttaacgtggtcttgcaggatatt aacgacaatgagcctgtttttggaagcaatttctacaatgtctccatcaaagagaacaca gctgctggaacgtgtttccttcaggtaaccgcaacggatgcagacggtggctcttttggc accatctcctattccattggctctggcctgggcagcgtcacacccacacagtttaccatc gggaaagagactggccagatctgcaccaaagtggcactggacagagacctgggcaccacc agctacgatttcactgtcaccgcagtcgatgggggtggtcttaactcaatggcctacgtg aaggtattcctggttgacattaatgacaacagaccaaccttctacccagtccactatgca gtcagcttgagcacgcagagtgcccctggtacttctgttgtcagggtaacggcctacgac catgacgaaggggagaatggccgagtgacgtaccgtacagttccagggggcagctcacaa tacttcacgctcaacaaagacacaggtgtgatctcgctgtctcgctctcttcatgggaag gccaactctgtgatccagatggtcatcactgcacaggatggtggggggcttatggctcct gttaatgccagggtcaatatcagtgtggttgctggctcagtggcgccccctgtgtttgaa caggcacactacttctttactgtctctgaggatgtgctgcgggggactcaggtgggagtg gtgcgagctatgagcagaaatggggagtccaaagacgtcttctacacaatctcctctggc gatccagatggctacttcacagtggactccgaaacgggggccctgcgcaccagccttcct ctcgaccatgaggcccgtccttcgctggagctggaggtgcaggctcgcagtggcatgccc ccggcctttgggcagacacgggttcgcatcaccatcgcggatgtcaacgacaacgctccc tctttcctgccttcgtcctcggagtccctgctcctgcctgaggccaccaaaatgggcaca gtggtctacagggtgcgcgctgaagaccgcgactcgggtcccaatgggcagctgagcttt gacctggcttccaccggggggcagcgtacctttggcatcgagcgcagtagtggggagatc cggctgatcggaagcctgtcctacgaaacgactccgcgctacgacctacaagtgacggcc aaggacagtggggttccccaactcagtgcgaccttcaccctggtggtgcacgtgcaagct gagaacaaccagggcccagttttcgacaccctcacctaccgcgttgagctgaaggaggga accccgctcaacacacgcttcctccaggtgcgagcgctgaaccaggaagccgccagcagc cccactgggagcacagcaagctccagtcctctggcttaccaccttcgcccggatggggac gcggcaggtttcggcattgcttccgactccggctggctgtttgtgaagagtgccctggat agagaagccaaggatctatacctgctgactgtcctagccacctcgggaagtggtcagctg aagaaaacgggcagcgccactgtccgagtgtcggtaacagacgagaatgacaactccccc agacttgcacaggagcgggctttcctggcagtacgagagaatttgccagaaggtactggt tttggaagagtgtcggcaactgatcgggatgcagggcttaacagccgccttactttccga ctcctacaccctgaccggaacttccagataaactcccaaactggagagatcagcacacgg accgctctgaaccgggagcaccagtcaagttaccagctggtggtggtggtacaggatggt ggcacgcctcctcggagcgccacgggcactgcacacatcacggtgctggacgagaatgac aatgccccctcctttacacatgcaaagcccgggagggaccttctcatgcaggtgcaggaa ggcaagccgtctggcactttgataggaacggtgcaggctaaggatcctgatgaaggagaa aatgggaccatctactactctctgtcaggccctagggcggaacgattttctttgaaccca aatacaggagagttgaggtcatcttctcccttgagtcgtactgagagagcagagtattct ttcactgtgacagccacagaccgtggccagccagctcagagcacctccaccactctaatc atacaggtccttagctccagtaagatggttcctaaacccaacacccatgctgtgacccta aaatctatagaaggtgccaaaccaggctcagtggttggctcggtcaggtcacatgaccag caggtcatgcacgaagaaggtcaggtgacctacacggtagtggggggcactgatcaagag ggcaccttcatggtggacagattgaccggcgacgtctacttagcaagagagctggactat gaacagggaacacgctatacccttcagatcgaggtagatgacttctccaaagcttatccc accagccgcatcatcacattggacatagatgttcaggacagcaatgaccatgcaccccag tttccagaggatccagttaccattgtcattcctgaaaatatggaacccggttcttccatc tacgcttttcaagctatcgacaaagatggcagtggaccaaatagtgagatccgttacacc atcctccaccagtggcctgacaacagtgacctcttgtctcttgacccatcaactggggtc ctgtccctggggcagattctggattgtgaaacaacctcttccctgtttctggtcgtaaaa gccacagactgcgccctcaatgcaagtcagcgccattggggttcggtgacagccaggatc tttgtgacagatgagaacgacaacgcccctgtcttcagctcccccacagcagtcagtgtc atggaggaccagcccgtaggctttgtcgtgctgtacgtcatggcgcaggatgctgatcaa ggagagaatggccgggtatcatatcggatccaggcaggcaacgctggaggaagattcagt ctcaaccctaacacaggctccctctctattctcaaggctcttgaccgtgaggagcaagca ctctacaatttgacgattgtcgcagaggatcatgggaccccccagcactcaactacacag ttactgtcagtgcaggtgatcgatgtgaacgacgaggcaccgtggttctcaaaaactgaa tttgaggcccagatttccgagaatcaacgagctggaacttccatactaactgtgtcagct gtcgatcgtgaccaagggacaaatggcttggtgacttatgggggtattgcagaggaggcg ttcactgttgacccgataactggggtcatttcatccacaaaagccctggatcgcgagaca caggaacgctacactgtcacagtctacgcaaaagatggtggcatgcctccaaattttgcc aaggcgaccatcaggatcagcatcctggatgagaatgacaacactccagcctttgggaag gatatgtacaacctggaggtgcctgagaacctgcagcccgtggagctcttcacattaaag gccacagaccttgatactggggacaatggagaagtggagtacaagatcattgatggagat cccaccagtgattttcatctggacagcagctctggagtgctctccacttcaaagcccctt gacagggaaaggagagcaagctattctttgaccattgtagctcaggatcacggaaaacat aagctcagcagtacagccaaagtggaagtgatggttctggatgtcaatgacaacagcccc agatttggacagtccgtttacaatatagatatttctgaaaatgcatctgttggcaggcta gtgcttgaagtgactgctaccgatgaggatgaaggatccaatgggaaagtactctacttc ttgagtagtgaggcccgtggcatgtttgacgtggaccaaaacacaggtagaattactaca acaggtcccctggacagagaaaagcgagctgcttacaaatttttggtgtgtgctgtggac tcttctccatctgctcccaggaataccacagcagaagttaccgtcaccatacaagacgtt aacgataatgccccctttttcattcaggacccacttatcatcaacatctccagcaacagt gtctccaatcaccaggtagtggctaccatgagagcagaggataaagattttggggccaat gggtccattttttatcggtttgccaccccagctcgtgggtttaccattaattctctaacg ggggatatccaggtaactgagaagttgctcactctgagtcaaaaacagagaacactgctt atagaggcgatggaccaggggacccctgcacggtcctccattggtgtggtggtgatttac gtcaaagaggaggactacaagggcattcgtttctcacgcaacacgcgagatgtgagcctc ccggaaaacgcagccttaggtacagctgtcgtacagatccaggcacagcatcccgatggc tctaaccgtggcatcacctacagcatcttcagcggaaacagactggagtcgttccgcatc agtgccagcacaggtgagatctgggtacagagttccactggtctagactttgaggagact cccaggcttcgcttagtggtgaaggccgagactccatcttccagttccttcatggccgtc aatttgatactccaagatgtgaacgataacctgccgcgattccagttgcagaactacatt gcttacttacgtgaggcgcaaggctatgactttcccattattcaggtattggctgatgat ccagaccagggtcagaatggccaagtgacctactccatccagtcatcctctatgagtggc ctttttaaaattgaccccttaaccggcagcatcaccacagcagccatcatggaccgggag atctggactcaaacaaagcttgttgtcgcggcaacagacagaggaagccccaggctcgcg gggactgcaactcttactgtggtcattgtggatctgaatgacaacagtcccacaatcccc ctgcctcgcgaagtccgagtgcctgagaacacactgataggaacagaaatcacccaggtg acaggaaatgatgtagactcaggccccgccctctcctatatgctccaactggacagcaag tccctgggaaagtttgggatccaccgatatgggggtgggatctccctcactgcccctctg gactacgaggagaggacctggtacacactcacagttcgctcctcggattccaagcacgag agtgaggccaacctgactgtgctggtagaggatgttaatgacaatgccccagtgttcacc caggacctgtaccaggtaactctgccagagcattcaccaccaggcagtcctgttgtcaca gtaaccgcaacagacagggattctggaaagaatgggaaggtcacctatagggtgatgtca tcaagtagagatggcttttacatagacccaagcaatggtaccctgtttatcagccaggag gctaaatttgatccagaccgacttgctgtcagcgtcgtcattgaggcacgtgatggaggc actccaacactgtcatccattaccactgttcaagtacaggtgtccgatgtcaatgacaat gcacctaccttccaccagtctgagtatagagccacggtttccgaggatggtatgccagga tcgaccatcctgactctggaggctgtcgatggagacctctctcgagaaaactgtggcttt gactttgccatcgccagtggtaatgcgggcaatgccttccagattgagagcagtgtccgc ttcattgagggaaggggattccagactgtgggcaccctcatcctggtagagcgcctggat ttcgagtttgtgtcgcagtacaatctgaccattgtggcatcagatcgaggtgtgccccag atgagctccagtgtaccggctgtgatcaccattactgacaccaatgataaccccccagcc ttcggccgtgctgaatacagtgtggcagtcaatgaaggtgtggggccaggcactgagatc cttcgattgtctgcctcagaccctgattctgctccaaatgctgagatccagtatgcaatc agctcaggtgatgagatggagctttttactgtggacagatggacaggagcgctcaggctg cagcaatccttagatcgggaaatgaaatcatcccatgtggttattgtccaggcttcagat ggccagggccactatgctttagctcctgtcactgtcgaggtgaaagacgttaatgacaac aagccctactttccactggaaacactgattgccagcattcaggagaaccagcccccaaat tctctggtcaccattcttcatgctgtagattttgacactggggtttatggacaattgcgc tactacatggtggacaaaactggcgagggcaaggactcatttttagtggaacaaaactct ggggaaatcagagcccgatcaacattagactttgaaaaggtgaaatcctttcgatttgtg gctctggcattggactctggcaactactcaacaacagtcacagtccaagtgtatgttaca ggagaagatgaatatgatccagtttttacctcttcagagtttgcttttgaggtgcctgag ggagctaaaaaaggtcagagtattggccaggttcaggccagcgatgaagatgaaggtgtg gatggaatcgtactctattcatttgctagtgacactccttattttggcatcaatgcaacc acaggggtggtctatctgaagatggacagtcagagcaggcacagttcagcaggccgttca aagagggaagcgaggcaaatgactttagacatagaagctcatagtccactagagtcttca cgggttaccactgctcagataactattgatgttactcacacttcctttggacttgcatca gatgtcaacatcttgctggtcattgtcatcgctgcatcacttggggctgttgtaatcttg attgtgattgctgtggccttgttgatggtgagatccaggaggaagaggaagcaggaggag tccagtagcaggactgcacccccaggaactgccttgcagaagcttgatgaggctaaactg tcaggaggggagaggatttaccatcagacgttgcctggatacactggtgaacaaggtgga acaggtggaggttcttataccagaggaggttcgcttgacccctcccattccagcggacga ggttctgcagaagcagaagcagccgaggatgatgagattcgcatgatcaatgaataccct cgggtgtcaagtatctcctcctccatgcaagaccacctatccacacggggtcctgattca gggatccagcaggatgcagaccagctctctgacatatcgtgtgaaccagggatggaggct ggacactggttcaaagggaagaaaattgggagtctcagtggaacattgctgtctggccag catccggtttacagagatgaaggtggaggatatctgggggtgggaagggggctgaacatc tcccatccaaaggattatgcattccccgaagatggtaagccctccatagatggctctctc acagccattgtggccagtgatgaggagctacggggtagctataactgggattacctcctc aactggtgtccccaatttcagccccttgccagtgttttcactgagatagcacgactgaaa gatgaaagtgctccccctaatcctcggcggcccttccagcctaaagcgaaagcagatccc aagcctagaatcgatccaccaccactcataacttctgtggcacatccgggggccaagact gttcccccaaagccagccattggacggacttttcctcatctagcttctctccggcgttct cctatcagccacgagggttctatctcctcagcagccatgtcccctagcttctccccttct ctatcccctttggcagccaggtccccagctgtttccccatttggtgtcacccaggggccc tcggcttccatgatcagcactgcagagcactcattggaccatccagaggaagctgaaatg agcatttag

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