Lepisosteus oculatus (spotted gar): 102692305
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Entry
102692305 CDS
T07349
Symbol
lmo7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102692305 (lmo7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102692305 (lmo7)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
102692305 (lmo7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ_6
PDZ
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
102692305
NCBI-ProteinID:
XP_015220002
Ensembl:
ENSLOCG00000011412
LinkDB
All DBs
Position
LG17:32518618..32590798
Genome browser
AA seq
1938 aa
AA seq
DB search
MEWRENSNVSCDLAFAEAQRWMEEVTNKKFGSNNFRSALENGVLLCDLINKIKPGIIKKV
NRLSTPIAGLDNVNVFLKACGRLGLKEAQLFHPGDLQDLSTRVTVKPEETDRRLKNVLIT
IYWLGRKAQTDPFYNGPHLNLKAFEGLLGTALSKVLEESGSLKRIGRDSGYGESWYAEKG
ELLLLPASHQRDDSLDSLDSVGSRSLSNSSDATLKGSCEGCGSDVELESAFKMSENKDGL
QYRRVAVVEPKNNAQFNQFLPTKDKQAGYVPAPLRKKRAERHEDNRRSWASPMYTEEDGS
FSSEEETGRSNPIPPNGHPLQGHPPATHLRLAYDYESDSDSEGERRQPNVQLDDLASRRF
QTHTPAFPANYAVPVHSADFCCHLSGSLPLGALSPAPGLAVGSTQQRGGVKVDSDPSAPE
QVLISDLCQTSEEEEGTADPQKDDLYARKVGLVLQPSAIVAYDTFLPKYWTPEEDLHVHK
IKLGSQRRPWYRKIQGFSQKSSSSSEESDCEGNLYFVPSSARDEQPPQSVSHKHLSHLDK
PRAAESMSDCCCSRVQQSLSMQPQTLKGATEHSQFTKPCASVPRLDPTTGPRVVKCERNS
FLSPLQQQDSGDISEKFLPDLENDDMFARRTGSFQSLVNLQCTSPEAREDRIPDSEPESS
IVTQTRREESATPDVKKDDLVFRKVRLGSLKMGLSLSGAPDVYHAIPVPEPWALPPSLRS
RLLCQPRTPIPEEEGEEGEEVEGKLCASHPKVDDMLVRKLGGVQPHTSVPVTIPVPTTCS
EEDLQKWKAIQEASRQRHKKKLMVKRLLEKHSGGNGSKSMNDVTQDTEITRQIRFEGLQK
LRTQIKESDNKWQDDLAKWKSRRKSFNNDLVKKMAEREEIELLTSTDTERKTKTFREMQE
ERENRGMRTLSTTTAESMSLHSSNEDVFTEQKPTSRALSERSYTVEVDNPYTAQTRVAPP
STPSRRAQKEHTESSTPRVAPMPTCTPVSTAASSSFRTATSPTSKTEATTTSTASRATES
RLLFEKSSEEKSSVPLYTHNSMDTKPGVARVSASLPRSYQRSDSLRLSSVVAPRPFGTQS
NKIASLSRAFTMDDAHNRYNGERERSQKTSTPSRYSQFMTEDDAQSQSSSVLSSNEEEEQ
EEEMDPSPPAPNTSSTLGDLRTDAPFSSEAVPPATKRTAAKPPEARVAPQEQYSDMRIIL
NQKPNSNRDFGFTTTWDSTAAIVKSIEHGSPAELCQLQVNDEILTVNGLKVSEMDYTQWK
ESMDKAHQNGNLVMDIRRYGKNNWGRDLPSLPFKSHKTINLTSMDATLIGSPEKYSNTSR
DLTSRESPGETRKPDFMSEPVNDAATKEVNGGFRGEAVTMRHKESEPISLKNLKRRSEFF
EQGGSESAISDLQVPSISTSSSRWSWDPEEERRRQEKWQKEQERQLQEKYKREQERLEEE
WRRAQQEAEKEGSKYYEEERRIIEVNTKPCLTHQSPDSPPSPQTWSWKDRSTLGEESSRI
TEEKDVARLQDEEAQRLKQQQQQEEEEERRRMRQSQEEEARLEEERRRQAEQEARQRQEE
QREKERKQREEEERQRQEEQRRRQQDEERRRQEAAEEQHREQERLRLRQQQQQQQRSGDT
YGFSKIQPEIEVSDRNKSKSTSDLDDDYTADGKGIYSRHGGMAQWLLEEELRRKKNREVQ
KMVAASELEAERKQILNLMKYADPERGTSKSMDSTWSRADSQKKDQALSQAELERQRIIE
EMKKKNQLVTDSSWIRQRSASVNKEPVSFSGPMRRGESLDNLDSPRSNSLKHPPWISSSS
SISSSLVQDFSRYPQPVSTSNRSYMRTPSTLPTSLSMGSLKQGLWNQPSPDLLLQQQQRS
RSVSGKKICAYCDAPLGKGAAMVIESLGLCYHLQCFKCIDCGSDLGGSETGAEVRIRNRQ
LYCNSCYLRFKTGQPTAM
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atggagtggagagagaattccaatgtcagctgtgatttggcttttgcagaagctcagcga
tggatggaggaggtgacaaataagaagtttggaagtaacaattttcgatcagcacttgaa
aacggagtcctgctgtgcgacctgataaataagattaaacccgggattataaagaaagtc
aacaggttgtccactccaatagctggcttggacaacgttaatgtgttcctgaaggcttgt
ggacggcttggattgaaagaagcacagttgtttcatccaggagatttacaagatttgtca
actcgagtcactgtcaagcctgaagaaacagacaggagattaaaaaatgttttaatcaca
atatattggctgggtaggaaagcacagactgatcctttctataatggacctcacctaaac
ttgaaagcttttgaaggattattaggaacagctctatcaaaggtgcttgaagaatcgggc
agtctgaagcgaattggcagggacagcggatacggcgaaagctggtacgcggagaaaggg
gagctgctcttacttccagcttctcaccagagagacgactccctagacagcttggactcg
gtcggctcgagatcactgagtaactcttcggacgcaactttgaaaggcagttgcgagggt
tgtgggagtgacgtggagttggaatcggcattcaagatgtcggagaacaaggatggtctt
cagtaccgccgggttgcagtggtagaaccgaagaacaacgcacagtttaaccagtttctt
cccactaaagacaagcaggctggatatgtcccagccccactgaggaagaagcgagctgaa
cgtcatgaagacaacaggagaagctgggcaagtcccatgtatactgaagaggatggctcc
ttttccagtgaagaagagaccggtaggagtaatcccattcctccgaatgggcatcccctg
caaggccaccctcccgcaacacacctacgattggcttacgactatgagagcgattccgac
tcagagggcgaaaggaggcagcccaatgtgcagttggatgacctggctagccgcaggttt
cagacgcacacacctgctttcccggccaactatgctgtgcctgtgcacagcgccgatttc
tgctgccacctgagtggttctcttcccctgggtgctttgtcaccagcacctgggctggca
gtgggtagcacgcagcagcgtgggggtgtcaaggtggacagtgacccttcagctccagag
caggtcctcataagtgacctttgccaaacttcggaagaggaagaaggcacagcggaccca
cagaaggatgacctctatgcacgcaaggttggcttggtgctgcaaccctcggcaattgtg
gcttatgacacatttctgccaaagtactggactccggaagaagacctgcatgtgcacaag
atcaagctcggatctcagcgcagaccatggtataggaagatccagggtttcagccagaag
tctagttcatcttcagaggagtctgactgtgaaggcaatctctactttgttccctcatct
gctagggatgaacagccaccccagtctgtgtctcataaacacctcagtcacctggacaag
ccaagggctgctgaaagcatgtctgattgctgttgttccagagtgcagcaaagtctttcc
atgcagccacaaactctaaaaggtgcaactgaacattcacaattcacgaagccttgtgcc
agcgtgcccagacttgaccccacgactggtcctagagtcgtaaagtgtgagaggaactca
tttcttagccctttgcagcaacaagactcaggcgacatatcggaaaagtttcttcctgat
ctggaaaacgatgacatgtttgcccgtcggactgggtctttccagagccttgtgaacctc
cagtgcacgagtccagaagcccgggaggaccgtatcccagactcagagcctgaaagcagt
attgtcactcagacgcggcgagaagagtcggcgaccccagatgtaaagaaagatgatctg
gttttccgtaaagtgaggctcggctctctgaaaatgggactctccctttctggagctcct
gatgtctaccatgctattcctgtaccggagccctgggctctgccaccgagcctccggtcc
cgacttctatgccagcccaggacacccattcccgaagaggagggggaagagggcgaagag
gtggagggtaaactctgtgcttcacacccaaaagtagatgacatgttggtgcgaaagctg
gggggagttcagcctcacacttctgtgcctgtgactatcccagttcccactacctgcagt
gaagaagacctgcagaaatggaaggcaattcaggaagccagcaggcagagacacaagaag
aagctgatggtgaagagactgctggagaaacactcgggtggaaatgggagcaagtccatg
aacgatgtaacccaggacacagaaataacccgccagattcgctttgaagggttacagaag
ttaagaactcagataaaagaaagcgacaataagtggcaggatgatcttgctaagtggaaa
agccgtcgcaagagctttaataatgaccttgtgaagaagatggcagaaagagaagaaatt
gaactgctgaccagcactgatacagagaggaaaaccaagacctttcgagaaatgcaagag
gaaagggagaacagagggatgagaaccctcagcacaacaacagctgagagcatgtccctt
cactcatccaatgaagacgtgttcactgagcaaaagcccacttccagagccctgtccgag
agaagctatactgtggaagtggacaatccttacacagcccagaccagagtggctccccct
tccaccccttctcggagagcacagaaggagcacacagaatcgtccactcccagagtagct
ccaatgcccacttgcacacctgtgtccacagctgcctcttcctccttcagaacagccaca
agccccacaagtaagacagaggcaaccaccactagcacagccagcagagcaacagaatcc
aggctcctgtttgagaaatcatcggaagaaaagagctctgttcctttgtatacacacaat
tctatggacacaaagccaggggtggctcgggtttcagcttctcttcctagaagctaccag
agatctgatagtttacggctgtcctccgtagtcgcaccacgaccttttggaactcagtca
aacaaaattgcatccctttccagagcttttacgatggatgatgcacacaatcgctacaac
ggagagagagagcgctcccaaaagaccagcacccctagccgatacagccagttcatgacg
gaggatgatgctcaatcccagtccagctctgtcctgagcagcaatgaagaggaggaacag
gaagaggagatggacccttctcctccagcaccgaacacaagcagcactcttggtgacttg
aggactgacgctcccttcagctctgaagcggtgccaccagccacaaagagaacggcagca
aagccaccagaggcaagggtggctccacaggagcagtatagcgacatgagaatcatcctg
aaccagaaaccaaacagcaatcgagactttgggttcacaactacctgggactccactgct
gccattgtgaagtccatagaacacggtagcccagctgaactatgccagctgcaggtgaat
gatgagatcctcacagttaatggcctgaaggtctccgagatggactacacgcagtggaag
gaaagtatggataaagctcatcagaatggaaaccttgtgatggacatacgcagatatggc
aagaataactggggcagagacctaccttccctaccatttaaaagccataaaaccatcaat
ctgaccagtatggatgcaacacttataggttcccctgaaaagtacagcaacaccagcaga
gatcttacttcacgcgagtccccgggggagaccaggaaaccagattttatgagtgagcct
gttaatgatgcagcaactaaggaagtgaatggaggtttccgtggggaggcggtcacaatg
agacataaagaatctgagccaatttctttgaaaaacttaaaaaggagatcagagtttttt
gaacaaggtggatctgagtctgcaatatcagatctgcaggtcccctccatcagcacctcc
tccagccgctggtcctgggaccccgaggaggagaggaggcgccaggagaagtggcagaag
gagcaggagcgccagctgcaggagaaatacaagcgtgaacaggagagattggaagaggag
tggcgccgtgcgcagcaggaggccgagaaggaagggtccaagtactatgaggaggagcgc
aggataattgaagtcaacactaaaccctgtttgacccatcagtcccctgactctccccca
agcccgcagacatggtcttggaaagatcgaagcactctgggggaggagtcatccaggatc
actgaagagaaggatgtcgccaggctgcaggacgaggaggcccagcggctcaagcagcag
cagcagcaggaggaggaagaggagcggagaaggatgaggcaaagccaggaggaggaggca
cgtctggaagaggagaggaggaggcaagcggagcaggaggcacgccagcgccaagaagaa
cagagggagaaagagaggaagcagagagaagaggaagagcgccaacgtcaagaggaacag
aggcgcaggcagcaggatgaggagaggagacgtcaagaagctgctgaagaacagcacagg
gagcaggagaggctgaggctgaggcagcagcagcagcagcagcagcggtctggcgatacc
tatggtttttctaaaatccagcctgaaattgaagtctcagacaggaacaagtcaaagtct
acttcagatcttgatgatgattacacagcagacggcaaaggtatttactccagacatggg
ggcatggctcaatggctgctggaggaggaattgaggaggaagaaaaacagggaagtccag
aaaatggtggcagcatctgagctggaggcagaaagaaagcaaatccttaatttgatgaaa
tatgctgacccagagagaggcaccagcaaatccatggacagcacctggagcagagcagat
tctcaaaagaaggaccaggctctctctcaggcagagctggaaagacagcggatcattgaa
gagatgaagaagaagaatcagcttgtgactgacagcagctggatcagacagcgcagtgcc
agtgtcaacaaggagccagtcagcttctctgggccaatgaggagaggcgagtcgcttgac
aacctggattcccctcgatccaactccctgaagcaccctccatggatatccagctcgtcc
tccatctcctcttctttggtccaggacttcagccggtatccccagccagtgtccacgtcc
aatcgcagctacatgcgcacaccttccactctgcccacatccctctccatgggttccctg
aagcagggtctctggaaccagccctctcccgatctgctcttgcaacagcagcagcgcagc
aggtcagtcagtgggaagaaaatctgtgcatactgtgatgcacctttgggcaaaggagct
gccatggtcatcgaatctctgggtctttgttatcatttgcagtgttttaagtgtattgac
tgtggctcagatctcggtggatcagaaacaggagctgaagtcagaatacgaaaccgccag
ctttactgtaactcctgctatctcagatttaaaactggacagcccactgccatgtga
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integrated database retrieval system
