Lepisosteus oculatus (spotted gar): 102692360
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Entry
102692360 CDS
T07349
Symbol
cacna1h
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04010
MAPK signaling pathway
loc04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102692360 (cacna1h)
04020 Calcium signaling pathway
102692360 (cacna1h)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
loc04040
]
102692360 (cacna1h)
Ion channels [BR:
loc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102692360 (cacna1h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
102692360
NCBI-ProteinID:
XP_015215834
Ensembl:
ENSLOCG00000005952
UniProt:
W5MFP3
LinkDB
All DBs
Position
LG13:11128661..11329632
Genome browser
AA seq
2416 aa
AA seq
DB search
MTDGEENEHFRQLGSEEVRVPISASEQCPARGGDPVYEEDGGSSGNPVMESLGSRGSSGR
DQVPDLVSEDEPQMPYPALAPVVFFCLKQTTRPRSWCLRLVCNPWFEHVSMLVILLNCVT
LGMYQPCEDLKCQSDWCTILQAFDDFIFAFFAVEMVIKMLALGIFGQKCYLGDTWNRLDF
FIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLL
CFFVFFIFGIVGVQLWAGLLRNRCFLEDSFKTVYNLSFLSSYYKHEEGEDSPFICSSNRD
NGMLRCHDVPRLKENGVECFLSMDNYSHSPYSLDTANKNGCVNWNQYYNVCKTGELNPHK
GAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLV
VIATQFSETKQRENQLMQEQRARYLSNDSTLASFSEPGSCYEELLKYISHLYRKVKRRAA
RLYASWQNKRRKKVNPNSCGAGGGPPSRRRRNRRRIRSIHHLVHHHHHHHHHHYHISNGS
PRGTRAPSEICDVLEMKTVGPGAQLMLPPASPALQSPSAGTESVHSIYHADCHFHGPQAR
RKSSSVAGNVRPVGGLNGGKNYPTIVPSTACSRASATPKPKGKRNGSNPAGLNRGSGNLS
IPDPYGRLHQLVGEHGVCRGSSRLSGLSIPFPVSGTVPGQLSCELAKCPYCARVLENPEL
EPSDSESGESDSNMVYEFTQDLRHGADHLGCRAHRQRRPKEKNRVRRCWDAFCDRLRWIV
ESKYFNRGIMIAILINTLSMGIEYHEQPEELTDVLEISNIVFTSMFALEMLLKLLAFGLF
GYIKNPYNIFDGIIVIISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMK
TMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLTTENGDTIPDRKNFDSLLWAIVTVFQI
LTQEDWNVVLYNGMASTSPWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTE
EDKLSTNFEDDEKMRELYATEMKMYSLMMTPNGHMDSRASIAPPIILRTAATPMPTPKSS
PYMDSVHTFSDSRRGSGVSIDPNAYDQRSLSSLRSSPCPPWGSGSNWGSRRSSWNSLGRA
PSLKKKHQSGERESLLSGEGRGSTEDEDSDGGRSSVSGASLQPRAESLEQPELLQVPAPR
PYHEHQDCNGKTLHLPPDFYLRADPHRDDPADYDDDMDDSYCFRIKKMLEPYKPQWCKDH
EDWALYLFSPENHFRSVCQKVITHKMFDHVVLVFIFLNCITIALERPDIHPYSTERTFLS
VSNYIFTAIFVAEMTVKVVALGFCSGKNSYLQSSWNILDGVLVFVSIVDIIVSLASAGGA
KILGILRVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIIFGILGV
QLFKGKFYYCDGFDTKNITNKSDCLQANYRWIRRKYNFDNLGQALMSLFVLSSKDGWVNI
MYDGLDAVAVDQQPVRNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEE
AKRREEKRLKRLEKKRRKAQRRPYYASYSPARLYIHTLCTSHYLDLFITFIIGINVVTMS
MEHYNQPRSLEEALKYCNYVFTIIFVFEAMLKLVAFGFRRFFKDRWNQLDLAIVLLSIMG
ITLEEIEINASLPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLL
FMLLFFIYAALGVELFGKLECNDDNPCEGLSRHATFDNFGMAFLTLFRVSTGDNWNGIMK
DTLRECRSEDKHCLSYLPLISPIYFVTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDAE
MDAEIEMEMTRRLSTTSGGRTLGPESRATYVGPRPDSPGQNEALSGSQENFLSVRKVSVS
RMHSLPNDSYMFRPVRPANAPYPLPEIEPCEGDLQLGSVGSVNSQGAEGDSLLRVPGTSP
GAGPSSAIPRNSSMPRIPPLLPSPSSPCSSRLLRRQEAIKHESFDVQSSDSKDNLTAQSS
DSLHLKVPGQSNLALPVPRIAAPSSPQPSPTPPRARTSSVHTHRQVYSQHSIPSRAASQT
SSPINSASPESSMFGSIDPADEEVRHINSSAKDWGGHSEVRSHSLSPYASPGSQVPGLLK
NCTSATSLAGSHVKDKDLKKFYSVDTEGFLAKPSWADDPRRHSIEICPSIDGDDDDSVFE
QPADGPRRSSLVSPHGLAVQRKKKMSPPCISVDPPLENELSAPAASLAKISESSMLLRRR
TPSCEAALPRDSLDLMEPQPPPEPPAKTEKRPPCRNEHLSVPQFSFDQSDVSSLSSMSDI
LSDSDQSSQSSMCYDPKPESETGSELKTLDHLRVRQGEDPEDKSQALISVTRSPLRKRGL
VRMPSTRDKDTDDSTA
NT seq
7251 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggagaacgagcactttcgtcagctggggagcgaggaggtgagagta
ccgatctcggcttcggagcaatgcccggctcggggcggagaccccgtgtacgaggaagat
gggggcagctctgggaaccccgttatggagagtttgggctccaggggatcgagcggacgc
gatcaggttcccgacctggtctcggaggatgaaccgcagatgccctatccagccctcgct
cccgtggtcttcttttgtctcaagcagacgacgcgacctcgcagctggtgtctgaggctg
gtttgtaacccctggttcgaacatgtcagcatgctggtcatcctcctgaactgcgtgacc
ctggggatgtaccagccctgtgaggacctcaagtgtcagtctgactggtgtaccatcctg
caggcgtttgatgactttatttttgccttcttcgccgtggagatggtcatcaagatgttg
gctctagggatatttgggcagaagtgttacctgggcgatacgtggaatcgtctcgatttc
ttcatcgttatggcagggatgatggagtactctttggatggccacaatgtcagcctgtct
gccatccgcactgtgcgtgtgctcaggccactcagagccattaacagagttcccagtatg
agaatactggtgactctgcttttagatactctgcctatgttaggcaatgtccttttgctt
tgttttttcgtcttctttatatttggaattgttggcgtacagctgtgggccggcctgctg
agaaacaggtgtttcttagaagacagtttcaaaacggtttacaacctgtctttcctgagc
tcctattacaaacatgaggaaggagaggacagccccttcatctgctcctccaacagagac
aacggcatgctgaggtgtcacgatgtcccgcgcctgaaggagaatggagtggaatgcttc
ctcagcatggacaactacagccattctccctacagccttgacacggccaacaagaatggc
tgtgtgaactggaaccaatattataacgtatgcaagacgggagagctgaacccgcacaaa
ggggctattaattttgataatattggatatgcctggattgccatttttcaggtgataaca
ttggaaggatgggtggacatcatgtattatgttatggatgcacattccttttacaatttt
atatattttatactgcttatcatagtgggctccttcttcatgattaacttgtgcctggtt
gtgatcgcaacccagttctcggagacgaagcagcgggagaaccagctgatgcaggagcag
cgcgcccgctacctgtccaacgacagcaccctggccagcttctccgagccgggcagctgc
tacgaggagctgctcaagtacatcagccacctgtaccgcaaggtgaagcgccgggcagcc
cggctctacgccagctggcagaacaagaggcggaagaaagtcaaccccaacagctgcggg
gcgggtggcggcccccccagccggcggcggcggaaccggcgccggatccgctccatccac
cacctggtccaccaccaccaccaccaccaccaccaccactaccacatcagcaacggcagc
ccccgcgggacccgggctccctccgagatctgcgacgtcctggagatgaagaccgtgggg
ccgggggcccagctcatgcttcctccggcctcgcccgccctgcagagcccctcggcgggc
acggagtcggtccacagcatctaccacgcagactgccactttcacgggccgcaggccagg
cggaagtcttccagcgtggcgggcaacgtccggccggtgggcgggctgaacgggggcaag
aactaccccaccatcgtcccttccacggcctgcagccgggccagcgccacgccaaaaccc
aagggcaagagaaacggcagcaaccctgcgggcctgaacaggggctcaggcaacctcagc
atcccagacccttacggcaggctgcaccagcttgtcggggagcacggggtgtgtcgggga
tcgagccggctctcgggcctcagcattcccttccctgtgtccggtaccgtgcccggccag
ctgtcctgtgagctggcgaagtgcccgtactgcgccagggtcctggagaaccccgagctg
gagcccagcgactccgagagcggagagtcggactccaacatggtttacgagttcacgcag
gacctgcggcacggcgcggaccacctgggctgccgcgcgcaccggcagcgcagaccgaag
gagaaaaaccgcgtcaggcggtgctgggatgcgttctgcgatcgactcaggtggatagtg
gagagcaaatattttaaccgggggattatgatcgccatcctgatcaacacgttgagcatg
ggcattgagtaccatgagcagccagaggagcttacagatgttctggagatcagtaacatt
gtcttcaccagcatgttcgccctggagatgctcctgaagctcttggcatttggcctcttc
ggatacatcaagaacccctacaacatctttgatgggatcatcgtaataatcagtgtgtgg
gagatcatcggccagtccgacgggggcctctcggtgctgaggaccttccggctgctgcgc
gtgctcaaactggtgcgcttcctgcccgctctgagacggcagctggtggtgctgatgaag
accatggacaacgtggccaccttctgcatgctgctgatgctcttcatcttcatcttcagt
attcttgggatgcacctttttggatgtaagttcagcctgaccacagaaaacggagacacg
attccagaccggaagaactttgattctttgctgtgggccatcgtcactgttttccagatc
ctgacacaggaggactggaatgtcgttctctacaatgggatggcatcaacatcaccttgg
gccgcactgtactttgtggctctgatgacgttcggcaattacgttctctttaatttgcta
gtcgctattctggttgaaggttttcaagcggagggagatgcaaacaggtctgacacagaa
gaagataaactgtccacgaattttgaggatgatgagaagatgagagagctatatgctaca
gagatgaagatgtactccctgatgatgacccccaatgggcacatggactccagggccagc
atagctccgcccatcatcttgcgcacagcggcgacgcccatgcctacccccaagagctcc
ccgtacatggactcggtgcacaccttcagtgactcgcgcaggggcagcggcgtgtccatc
gaccccaacgcctacgaccagagatccctgtccagcctgcgcagctctccctgccccccc
tggggctccggcagtaactggggcagccgccgctccagctggaacagcctcggccgcgcg
cccagcctgaagaagaagcaccagtccggggagagggagtccctgctctcgggggagggc
cggggcagcacggaggacgaggactcggacgggggcaggtccagcgtgagcggggcctcg
ctgcagccccgagccgagtccctggagcagcccgagctgctgcaggtccccgccccccgc
ccataccacgagcaccaggactgcaacggcaagaccctgcacctgccccccgacttctac
ctgcgcgccgacccccacagggacgaccccgccgactacgatgacgacatggacgatagc
tactgtttccgaatcaagaagatgcttgagccgtacaaaccgcagtggtgcaaagaccac
gaagactgggctctgtacctgttctcccctgagaaccacttcagatcagtgtgtcagaaa
gtcatcacccacaagatgttcgaccatgtggtgctggtgttcatcttcctgaactgcatc
accatcgcgctggagagaccagacatccatccctacagcacagagcgtacgtttctgagt
gtctccaattacattttcaccgcgatatttgttgctgaaatgaccgttaaggtggtggct
ctagggttctgttcagggaagaacagttacctgcagagtagctggaacatcttggatggc
gtgctggtcttcgtttccatcgtcgacatcatcgtctccctggcctccgcgggcggggcc
aagatcctgggcatcctgagggtccttcgtctgctgaggaccctgcgacctctgagggtc
attagccgtgccccagggctgaagctggtggtggagacattaattacatcactccggcct
atcggtaacatcgtgctcatctgctgcgcatttttcatcatatttggaatccttggtgtc
cagctgttcaagggcaaattctactattgtgatggatttgacacaaaaaacatcaccaac
aagtcagactgcttgcaagcaaactatcgctggatacgaaggaaatataactttgacaat
cttggacaggcactgatgtcactgtttgtcctgtcctctaaggatggctgggttaatatc
atgtacgatggtctcgatgccgtggcagtggaccagcagcccgtgagaaaccacaacccc
tggatgctgctttactttatttccttcctgctcattgtcagcttctttgtgctcaacatg
tttgtgggcgtggtggtggagaacttccacaagtgccggcagcaccaggaagccgaggag
gccaagaggcgcgaggagaagcgcctgaagaggctggagaaaaagcgcaggaaggcccaa
cgccgtccgtactacgccagctactccccggctcgcctctacatccacacgttgtgcacc
agccactacctggacctcttcatcaccttcatcatcgggatcaatgtggtcaccatgtct
atggaacactacaaccagcctcggtccctcgaagaggccctgaaatactgcaactacgtg
ttcacaattatctttgtttttgaggcgatgttaaaactggtggcatttggctttcggaga
ttctttaaggacagatggaaccagctggatctggccattgttttactctctataatggga
attactttggaagagattgagattaatgcctcacttcccataaaccccaccataatccgc
atcatgagagtgctaaggattgcaagagtgctgaagctgttaaagatggccactgggatg
cgtgctctgctggatacagtagtgcaggctttaccacaggtggggaaccttggtctgctg
ttcatgcttctcttctttatctatgctgctctgggagtggagctctttgggaagcttgag
tgtaacgatgacaacccctgtgagggtctgagcagacacgccacgtttgacaactttgga
atggcctttctcacgctgttcagggtttctacaggagacaactggaatggcatcatgaag
gacaccttgcgggagtgccgcagtgaggacaagcactgcctgagctacctgccactcatc
tcccccatctacttcgtcaccttcgtcctgatcgcccagttcgtgctggtcaacgtggtg
gtggccgtgctcatgaagcacctggaggagagcaacaaggaggccaaggaggacgccgag
atggacgccgagatcgagatggagatgacccgcaggctcagcaccacctctgggggcagg
accctggggcctgagagcagggccacgtacgtggggcccagaccagactcacctgggcag
aatgaagcgctgtctggctcccaggagaatttcctgtctgtgaggaaggtttctgtctcc
aggatgcattccttaccaaacgacagctacatgttccgcccagtgaggcctgctaacgcc
ccctaccctctgccagagattgagccctgtgagggagacctgcaattaggctcggttggc
tcggtgaactcgcagggagctgagggggactccctgctgcgggttccggggacctcgccc
ggcgccggccccagctcggccatccccagaaacagcagcatgcccaggatcccacctctg
ctgcccagcccctcctccccctgcagcagcaggctgctgcgacgacaggaggccatcaaa
cacgaatcctttgatgtgcagagcagtgactcaaaagacaacctcacggcacagtccagt
gacagcctgcatctcaaagtgccaggccagagcaatctagccctgccagtgcccaggata
gcagcgcccagtagcccccagccctctcccaccccgcctcgtgcccgcacctccagcgtg
cacacccaccggcaggtgtacagccagcacagcatccccagcagggccgccagccagacc
agcagccccattaacagtgccagtcccgagagctccatgttcggctccatagacccagcc
gacgaggaggtgcggcacatcaacagctctgccaaagactggggcggccactccgaagtg
cggagccactccctctccccctacgcgtctcccggctcccaggttcccggcctgctgaag
aactgcaccagtgccaccagcctggccggctctcacgtcaaggacaaggacctgaagaag
ttctacagcgtggacacggaggggttcctggccaagccctcgtgggccgacgatccccgc
aggcattccatcgagatctgtccctccatcgacggcgacgacgacgactccgtcttcgag
cagccggcggacgggccgcggcggtcttccttggtgtcgccccacgggctggccgtgcag
cggaagaagaagatgagccccccttgcatctcggtcgaccctccccttgaaaacgagctc
tcggcccccgctgcctcgctggcgaagatatccgagagcagcatgctgctgcgcaggagg
acgccctcgtgcgaagccgcgctgccgcgcgactccctggatttgatggagccccagccc
cccccggagccccccgccaaaactgagaaacgccccccgtgccggaatgagcacctctcc
gtcccccagttctcctttgaccagtcggacgtcagctctctgagcagcatgtcggacatc
ttatccgacagcgaccagtcctcccagtcctccatgtgctacgaccccaagcccgagagc
gaaacgggctccgagcttaagactctggaccacctaagagttcgccaaggcgaagacccg
gaggacaagagtcaggccttgattagcgtcacgaggagccctctgagaaagagaggactg
gtccgcatgccaagcacaagggacaaggacactgatgattccactgcatag
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integrated database retrieval system
