Lepisosteus oculatus (spotted gar): 102692540
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Entry
102692540 CDS
T07349
Symbol
cnga1
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
102692540 (cnga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
loc04040
]
102692540 (cnga1)
Ion channels [BR:
loc04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
102692540 (cnga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
CDC45
DUF3043
Sec62
PFF1_TM
Tim54
Ion_trans_2
DUF2207_C
Piezo_TM1-24
TetR
Mat89Bb
NPR3
SLC52_ribofla_tr
ADI
MDM10
CLN3
Serinc
Motif
Other DBs
NCBI-GeneID:
102692540
NCBI-ProteinID:
XP_006629908
Ensembl:
ENSLOCG00000011990
LinkDB
All DBs
Position
LG4:50614821..50630313
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AA seq
655 aa
AA seq
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MASVIDTHRTHIVPPRIVLQDMDEDVERMESGESKDESPSGPQALFNVNNSNNNEEEDKK
KKKKEKKEKKAKKEKKEKKEKKKDKEKAKEEKEKAEKEKEKEKDKEKEKKEQPKKELYII
DPAGNMYYNWLFVITMPVMYNWTMIIARACFEELQHDYLITWFIVDYVSDLIYLADMLFR
TRTGYLEQGLLVRDEKKLRERYMDTTQFKIDLLSMIPTDVMYFKMGLNYPEIRLNKLFRV
GRMFEFFQRTETRTNYPNIFRISNLVMYIVIIIHWNACLYFSFSKAIGFGADTWVYPNVS
DPEFGRLVRKYAYSLYWSTLTLTTIGETPPPVQDSEYFFVVIDFLVGVLIFATIVGNVGS
MISNMNAARADFQARIDAIKQYMHFRKVSKDLEKRVIKWFDYLWTNKKAVDEREVLKYLP
DKLRAEIAINVHLDTLKKVRIFADCEAGLLIELVLKLRPQVYSPGDYICRKGDIGREMYI
IKEGKLAVVADDGITQFVVLSDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSK
DDLMEALTEYPDAKAMLEEKGRQILMKDGLLDLDIAKLGPDPKDMEEKVNKMYGNLETLQ
TKFARLLAEYEAAQQKLKQRVTKIENKLMSSGQVVMSELVDPEAGAEPAEAKEKD
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgtaattgacactcatcgcacccatatagtgcccccacggatagttctgcag
gatatggatgaagatgtggagaggatggagagtggagagtcaaaggacgaatctccatct
ggtccacaggcactctttaatgtcaacaacagcaacaacaatgaagaggaggacaagaag
aaaaagaaaaaagagaaaaaggagaaaaaagccaaaaaagaaaagaaggaaaagaaagaa
aagaagaaggacaaagaaaaggcgaaagaagagaaagaaaaagcagaaaaggaaaaagag
aaggagaaagacaaggaaaaggagaaaaaggaacaaccaaagaaggaactttatatcatt
gacccagcgggaaacatgtactacaactggctgtttgtcatcacgatgcctgttatgtat
aactggaccatgatcattgcaagagcctgttttgaagagctccaacatgactacctgatc
acgtggttcattgtagactatgtgtcagacttgatatacctagccgacatgttattcagg
acacggacaggctacctggagcaaggattgctagtgagggatgaaaagaaactgagggaa
cgatacatggacactactcagtttaaaatagacctgctgtctatgataccaaccgatgtc
atgtacttcaaaatgggactcaactaccctgagatccgactcaataagttgttcagagtg
ggccgaatgtttgaattctttcagagaacagaaacaaggaccaactatcccaacattttt
cgaatctccaaccttgtcatgtacatcgtaatcatcattcactggaatgcttgcctttac
ttctccttctctaaagcgattggttttggggcagacacatgggtctaccctaatgtttcc
gatccagagtttggacgacttgtcaggaaatatgcgtacagcctttactggtctacacta
acactgaccaccattggtgagacccctcctccagtccaagactctgaatacttctttgtt
gtcatcgatttcctggttggcgtgttgattttcgctaccattgtcggtaacgtcggctca
atgatctccaatatgaatgctgccagggcagatttccaggcaaggattgatgctattaaa
cagtatatgcactttcgcaaagtcagcaaggatctggaaaagagagttataaagtggttt
gactacttgtggaccaacaagaaagctgtggatgaaagagaagtcctgaagtatctccca
gacaaactgcgagctgagatcgctatcaacgtccacctggacactctgaaaaaggtacgg
atctttgctgactgtgaggcaggacttttgattgaactggtcttgaagctgcgacctcaa
gtctacagcccaggcgactatatatgccgaaagggggatattggccgggaaatgtacatc
atcaaggaaggcaagctggctgtcgttgctgatgatgggatcacgcagtttgtggttttg
agcgatggcagctactttggggaaataagtatcctgaacattaaaggcagtaaagctggg
aaccgtagaactgccaatattcgcagtattggatattcggatctgttctgcctttccaag
gatgacctgatggaagccctcactgagtacccagatgcaaaggccatgcttgaagagaaa
ggaagacaaatcctcatgaaggatgggctgctcgatctggacatagccaagctaggacct
gacccaaaggacatggaggagaaagttaacaaaatgtatggaaatttggagaccctgcag
actaagtttgccagactattagccgagtatgaggcagctcagcagaagctgaagcagcgg
gtgactaagatcgaaaacaagctgatgtcttctgggcaggttgtgatgtctgaactggtg
gatccagaggctggagctgaacctgctgaagcaaaggagaaagattag
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