Lepisosteus oculatus (spotted gar): 102692618
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Entry
102692618 CDS
T07349
Symbol
lamb1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04510
Focal adhesion
loc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102692618 (lamb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102692618 (lamb1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
102692618
NCBI-ProteinID:
XP_015207975
Ensembl:
ENSLOCG00000015900
UniProt:
W5NG27
LinkDB
All DBs
Position
LG8:complement(18476199..18507259)
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AA seq
1781 aa
AA seq
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MMLAVGAILAVWVPALAQVPEFSDVCREGSCYPATGDLLIGRAHQLSATSTCGLLKPEPF
CIVSHLQEEKKCFVCDSKKLYDESTNHTTSHRIENVVTTFAPNRLKTWWQSENGIENVTI
QLNLEAEFHFTHLIMTFKTFRPAAMVIERSSDFGNTWQVYRYFAYDCESSFPSVSRGPMK
KVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIEDPYSPRIQNMLKITNLRIKFTKVHTL
GDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPVDGIGEDVEGMVHGHCMCNHN
TKGLNCEQCKDFYHDLPWRPAEGRNTNACKKCNCNQHSNICHFDMAVYMSTGNVSGGVCD
NCQHNTMGRNCEQCKPFYFQHPERDIRDPNICEQCNCDPVGSLNGGICDRHTDVSSGLIA
GQCRCKPNVEGERCDQCKQGYYGISDDPLGCQPCTCNPLGTVPGGSPCNVETGNCFCKRL
VTGRNCDQCLAQHWGLSNDMDGCRPCDCDQGGAINNDCSAETGQCQCRDHMFGRQCSEVE
SGFYFIALDHYTYEAEDATLGPGVTIVQRPYPQDRTPTWTGIGFVSVPEGAYLEFYIDNI
PHSMEYDILIRYEPQLPDKWEEVVVRVDRPSIISTGSRCVNTVPDDDNQVVSLPPGSRYV
VLPRPVCFERGLNYTVRLSLPFYSNLSEIQSPYTLIDSIVLMPHCKSLEIFTGASGEDVI
TNSAWETFQRYRCLENSQSVVKTPMTDICRNFIFSISALLHQGALSCQCDPQGSLSTVCD
PNGGQCQCRPNVVGRNCDQCAPATYLFGPSGCRPCECNPHGSVNSFCHVATGQCECIHGT
YGRQCDKCLPGYWGFPTCRSCNCNGHTDHCDPQTGECLGCKDHTTGLNCERCLDGYYGDP
VLGSGDHCRPCLCPDGPGSGRQFASACYQSRDSLQVFCVCNQGYKGARCDECSPGYYGNP
NEVGGICRPCQCNNNIDMLDPGSCDAHTGICLKCLYHTEGENCRRCKLGYFGDALTQSCR
KCVCNHLGTANETCPSAADCHCDLASGQCQCLPNVIGQNCDQCAPDTWNLASGTGCEPCD
CDETNSLGSSCNEWTGQCSCNPGFGGRTCRDCKELYWGDPNVECKACDCDARGIQTFQCD
SATGHCICKQGVSGPRCNECARGYSGVFPDCVQCHQCFDVWDTVIRDLTNKTHKLIQRAN
SVKASGITGPYQETINAVEQSAYNIKDILAQNPAAQPLSDLQDLLENAKKVIIEVTEKIN
STEGTLSETSANKNSTNSKLDALKEDAQNLEKSVKDLLGQVELIKNSDVRGASDSVSKYF
QQSMDAEARVNASTTDPGNTVEQSSAIRQQVEDKMNETRLQFDENQAEYSKRLDDLAGQL
ESLDLTELSEKTCGPSEGTTCSESHCGGLSCQGEDGTRKCGGKNCDGLVTLANDAWQKAK
DFDSEILNALEEVDRLSKMVSEAKLKADEAKLSAQEVLQKTNQTKQKVDQSNEDLRKLIK
QIREFLMQDGADLESIEAVANEVLEMQMPTTPAQLQNLTDEIRERVGSLSDVEAILTQSS
ADIHRAETLLDEAKKAGKEATDIKNTADRVKKALEEAEKAQTAVAEAIEQAGKDIQGTND
FLTSVESETANSEFKLNNATQRLLQLEKDIDDLKQKALTNIATADEIEKSTDKIQEDANE
AKKELDSELKNKYNDVEDLIVKKTEGVADARKRAEELQNEAKELLSHASRKLQLLKDLEK
SYEDNQRTLEEKANQLVDLEKAVRDLLQEISQKVTVYSTCL
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttgcagtcggagcaattttagctgtgtgggtccctgctctcgcccaggttcca
gagttcagcgatgtctgcagggaaggaagctgttacccggccaccggtgacttgctgata
gggagagctcatcagctttcagctacttcgacctgcggactcttgaagcctgagcccttt
tgcattgttagccacttgcaggaagaaaagaagtgctttgtctgtgattctaaaaaactg
tatgatgaatctacaaaccacaccaccagccatcgtatcgagaatgtggtcacaactttt
gctcctaatcgtttgaaaacctggtggcagtctgaaaatggcatagaaaatgtaaccatc
cagctgaatctggaggcggaatttcatttcactcatctcattatgacgttcaagacattt
cgtcctgctgcaatggtgattgaacggtcctctgattttgggaatacctggcaagtgtat
cgttattttgcttatgactgcgagtcatctttcccatctgtctcacgaggacctatgaag
aaagttgatgatgtaatatgtgactctcgatattcagacattgagccttctacagaagga
gaggttatcttccgggttttagatcctgcatttagaatcgaagatccttacagccccaga
atccaaaacatgttgaaaatcacaaacctaaggatcaagtttacaaaagtacatacgtta
ggagacaacttgctggactccagaatggaaattaaagagaagtactactatgctatctat
gacatggttgtgcgtgggaactgcttctgctatggtcatgccagtgaatgtgcccctgta
gatggtattggagaagatgtagaaggaatggtacatgggcattgtatgtgtaatcacaac
accaaaggtctgaattgtgaacaatgcaaagacttctatcatgatttaccctggagacca
gctgaaggacgcaataccaatgcctgcaaaaagtgtaactgcaaccagcattccaacatc
tgccattttgatatggcagtttacatgtccactgggaatgtcagtgggggagtgtgtgac
aattgccaacacaataccatgggacgcaactgtgaacaatgcaagcctttttatttccag
catccagagagagacattcgtgatcctaacatttgtgaacaatgtaattgtgaccccgtt
ggttctctcaatggtggaatatgcgatcgacacactgacgtctcctctggtctcattgct
ggacagtgtcgttgcaagcccaacgtagagggggaacgttgtgatcagtgtaaacaagga
tactatggaataagtgatgacccactggggtgccagccttgcacgtgcaatcctctggga
actgtcccaggaggaagtccatgcaatgtagagacaggaaactgcttctgcaaacgcttg
gtaactgggaggaactgtgaccagtgtctggcacagcactggggattgagcaatgatatg
gatggatgtcgcccatgtgactgtgaccaagggggagctatcaataacgattgttctgca
gaaactggacagtgtcagtgtcgtgatcacatgtttggacgccagtgcagtgaagtggaa
tctggattttactttattgctctggaccattacacgtatgaagcagaggatgccacccta
gggccaggagtgacaattgtacagagaccctaccctcaggatcggacacctacatggaca
ggtattgggtttgtgagtgtaccagagggagcctacctggagttctacattgacaacatc
ccgcattctatggagtatgatattctgattcgctacgaacctcagttaccagacaagtgg
gaagaggttgttgtaagagtggatcgtcctagcataatttccactgggagcagatgtgtg
aatacagtgcctgatgatgacaaccaagtggtgtcactacctccaggttccagatatgtg
gttcttccaaggcctgtgtgttttgaaaggggactgaactatacagtccgtctcagcttg
cctttttactccaatctgagcgagatccagagtccatacactctgattgattctattgtt
ctcatgcctcactgtaaaagccttgaaattttcactggagcttccggggaagatgttatc
acaaacagtgcatgggaaacgttccagaggtaccgctgtctggagaacagccagagtgta
gtgaaaacccccatgacagacatctgcaggaacttcattttcagtatttctgcactgctt
caccaaggagccttgagctgtcagtgtgacccccaaggttccttaagcactgtgtgtgat
cctaatggaggtcagtgccagtgcaggcccaatgtggtgggaagaaactgtgaccagtgt
gctcctgctacctatttatttggaccaagtggctgtagaccctgtgagtgtaaccctcat
ggctctgttaacagtttctgccatgtggcaactggtcagtgtgagtgtattcatggcaca
tatggacgtcagtgtgacaagtgtctgccgggttactggggatttcctacttgccgctcc
tgtaactgcaatgggcacacagaccactgtgaccctcagacaggggagtgcttgggctgc
aaggatcatactactggactcaactgcgaaagatgtttagatgggtactatggagatcca
gtcctgggctcaggggatcactgtcgcccttgtctatgcccagatggtccaggcagcgga
cgccagtttgccagtgcctgctatcaaagcagagattccctccaagtgttttgtgtctgt
aaccagggatacaaaggtgccaggtgtgatgagtgttctccaggttactatggcaatcct
aatgaagttggaggaatatgccggccatgtcagtgcaataacaatattgacatgctggat
ccgggttcctgtgatgcgcatacaggaatttgtctgaaatgcctgtaccacactgagggt
gaaaactgtcgtcgctgcaagcttggatactttggagatgctctaactcaaagttgtaga
aaatgtgtttgtaaccacctgggcacagcaaatgaaacttgtccttcagctgccgactgt
cactgtgatttggccagtgggcaatgtcagtgtcttcctaatgtgattgggcagaattgt
gaccaatgtgctcccgacacctggaatttggctagtgggacaggttgtgaaccctgtgat
tgtgatgaaaccaattccctgggatcttcttgcaatgaatggacaggtcagtgttcctgc
aatcctggatttggaggaagaacatgccgagactgcaaggagctctactggggtgatccc
aatgttgagtgcaaagcttgcgactgtgatgccagaggtatccagacttttcagtgcgac
tcagccacaggacattgtatctgcaagcaaggcgtgtcaggtcccagatgcaacgagtgt
gcccgagggtactctggtgttttccctgactgtgtgcagtgccatcagtgctttgatgtg
tgggacactgttattagagacttaaccaataaaacacacaaactgatacagagagctaac
tcagttaaagcaagtggaataactggaccataccaggagacaattaatgcagtggagcaa
agtgcttataacatcaaagatatacttgctcagaatccagcagcccagccactaagtgat
cttcaggatctcctggaaaatgcaaaaaaagtaatcattgaagtgactgagaaaataaac
agcacagaagggacactttcagaaacatcagctaataagaacagcactaactccaagtta
gatgctcttaaagaagatgctcagaatttggagaaatctgtgaaggacctgttaggtcaa
gtggaattgataaaaaattccgatgttcgaggggcatcagacagtgtcagcaagtatttc
cagcagtctatggatgctgaagcgagggtaaatgcatccaccactgaccctggcaacact
gtagaacaatcatctgcaatccgccaacaagtggaagataagatgaatgaaaccagactt
caatttgatgaaaaccaagcagaatattccaaaagactggatgatcttgctggtcaacta
gaatccctagacctcactgagctcagtgaaaagacttgtggaccctctgaaggcactact
tgctctgagtcacactgcggtggattaagctgccagggtgaagatggcaccaggaagtgt
ggaggcaagaactgcgacggcctggtgactctggcaaatgatgcctggcaaaaagctaaa
gactttgacagcgaaattcttaatgccctggaagaagttgacaggctatctaagatggta
tctgaggctaaactcaaggctgatgaagccaagctcagtgctcaggaggttcttcagaaa
accaaccaaaccaagcagaaagtggatcaaagcaacgaagatcttcgtaaacttatcaag
cagatacgagagttcttaatgcaagatggtgctgatcttgaaagcattgaggctgttgct
aatgaagtgttagaaatgcagatgcccaccacaccagcacagctccagaatttgacagat
gaaattcgtgagcgagtggggagcttgtctgatgtagaggccattctaacccaaagttca
gcagacattcatcgagcagaaacactacttgatgaagctaagaaggcaggtaaggaggca
acagacatcaagaacactgcagacagggtgaaaaaagccctggaggaggcagaaaaagcc
caaactgctgtagcagaagccatcgaacaagctggcaaagacattcaggggaccaatgac
ttcttgacctctgtggagtctgaaactgcaaactcagaattcaaattgaacaatgcaacc
cagagattacttcagctggaaaaagacattgatgaccttaaacaaaaagcactcacaaac
attgctactgcagatgaaattgagaaatcaactgataaaatacaagaggatgccaatgaa
gccaaaaaggaactagatagtgaactgaagaataaatacaacgatgtagaagatttgatt
gttaaaaagactgaaggtgtggcagatgcaaggaagagggcagaagagcttcagaatgaa
gccaaggaactgttatcacacgcaagcaggaaacttcagcttctaaaagatttagagaaa
tcttatgaagacaatcagagaaccttagaagagaaagcaaatcagcttgtagacctggag
aaggcagtgcgggatcttttgcaagaaatcagccagaaggttacagtttacagtacatgc
ttgtaa
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integrated database retrieval system