KEGG   Lepisosteus oculatus (spotted gar): 102692618
Entry
102692618         CDS       T07349                                 
Symbol
lamb1
Name
(RefSeq) laminin subunit beta-1
  KO
K05636  laminin, beta 1
Organism
loc  Lepisosteus oculatus (spotted gar)
Pathway
loc04510  Focal adhesion
loc04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:loc00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102692618 (lamb1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102692618 (lamb1)
SSDB
Motif
Pfam: EGF_laminin LAMININ_IV_B Laminin_N EGF_LMN_ATRN LAMB1 F5_F8_type_C Alanine_zipper
Other DBs
NCBI-GeneID: 102692618
NCBI-ProteinID: XP_015207975
Ensembl: ENSLOCG00000015900
UniProt: W5NG27
LinkDB
Position
LG8:complement(18476199..18507259)
AA seq 1781 aa
MMLAVGAILAVWVPALAQVPEFSDVCREGSCYPATGDLLIGRAHQLSATSTCGLLKPEPF
CIVSHLQEEKKCFVCDSKKLYDESTNHTTSHRIENVVTTFAPNRLKTWWQSENGIENVTI
QLNLEAEFHFTHLIMTFKTFRPAAMVIERSSDFGNTWQVYRYFAYDCESSFPSVSRGPMK
KVDDVICDSRYSDIEPSTEGEVIFRVLDPAFRIEDPYSPRIQNMLKITNLRIKFTKVHTL
GDNLLDSRMEIKEKYYYAIYDMVVRGNCFCYGHASECAPVDGIGEDVEGMVHGHCMCNHN
TKGLNCEQCKDFYHDLPWRPAEGRNTNACKKCNCNQHSNICHFDMAVYMSTGNVSGGVCD
NCQHNTMGRNCEQCKPFYFQHPERDIRDPNICEQCNCDPVGSLNGGICDRHTDVSSGLIA
GQCRCKPNVEGERCDQCKQGYYGISDDPLGCQPCTCNPLGTVPGGSPCNVETGNCFCKRL
VTGRNCDQCLAQHWGLSNDMDGCRPCDCDQGGAINNDCSAETGQCQCRDHMFGRQCSEVE
SGFYFIALDHYTYEAEDATLGPGVTIVQRPYPQDRTPTWTGIGFVSVPEGAYLEFYIDNI
PHSMEYDILIRYEPQLPDKWEEVVVRVDRPSIISTGSRCVNTVPDDDNQVVSLPPGSRYV
VLPRPVCFERGLNYTVRLSLPFYSNLSEIQSPYTLIDSIVLMPHCKSLEIFTGASGEDVI
TNSAWETFQRYRCLENSQSVVKTPMTDICRNFIFSISALLHQGALSCQCDPQGSLSTVCD
PNGGQCQCRPNVVGRNCDQCAPATYLFGPSGCRPCECNPHGSVNSFCHVATGQCECIHGT
YGRQCDKCLPGYWGFPTCRSCNCNGHTDHCDPQTGECLGCKDHTTGLNCERCLDGYYGDP
VLGSGDHCRPCLCPDGPGSGRQFASACYQSRDSLQVFCVCNQGYKGARCDECSPGYYGNP
NEVGGICRPCQCNNNIDMLDPGSCDAHTGICLKCLYHTEGENCRRCKLGYFGDALTQSCR
KCVCNHLGTANETCPSAADCHCDLASGQCQCLPNVIGQNCDQCAPDTWNLASGTGCEPCD
CDETNSLGSSCNEWTGQCSCNPGFGGRTCRDCKELYWGDPNVECKACDCDARGIQTFQCD
SATGHCICKQGVSGPRCNECARGYSGVFPDCVQCHQCFDVWDTVIRDLTNKTHKLIQRAN
SVKASGITGPYQETINAVEQSAYNIKDILAQNPAAQPLSDLQDLLENAKKVIIEVTEKIN
STEGTLSETSANKNSTNSKLDALKEDAQNLEKSVKDLLGQVELIKNSDVRGASDSVSKYF
QQSMDAEARVNASTTDPGNTVEQSSAIRQQVEDKMNETRLQFDENQAEYSKRLDDLAGQL
ESLDLTELSEKTCGPSEGTTCSESHCGGLSCQGEDGTRKCGGKNCDGLVTLANDAWQKAK
DFDSEILNALEEVDRLSKMVSEAKLKADEAKLSAQEVLQKTNQTKQKVDQSNEDLRKLIK
QIREFLMQDGADLESIEAVANEVLEMQMPTTPAQLQNLTDEIRERVGSLSDVEAILTQSS
ADIHRAETLLDEAKKAGKEATDIKNTADRVKKALEEAEKAQTAVAEAIEQAGKDIQGTND
FLTSVESETANSEFKLNNATQRLLQLEKDIDDLKQKALTNIATADEIEKSTDKIQEDANE
AKKELDSELKNKYNDVEDLIVKKTEGVADARKRAEELQNEAKELLSHASRKLQLLKDLEK
SYEDNQRTLEEKANQLVDLEKAVRDLLQEISQKVTVYSTCL
NT seq 5346 nt   +upstreamnt  +downstreamnt
atgatgcttgcagtcggagcaattttagctgtgtgggtccctgctctcgcccaggttcca
gagttcagcgatgtctgcagggaaggaagctgttacccggccaccggtgacttgctgata
gggagagctcatcagctttcagctacttcgacctgcggactcttgaagcctgagcccttt
tgcattgttagccacttgcaggaagaaaagaagtgctttgtctgtgattctaaaaaactg
tatgatgaatctacaaaccacaccaccagccatcgtatcgagaatgtggtcacaactttt
gctcctaatcgtttgaaaacctggtggcagtctgaaaatggcatagaaaatgtaaccatc
cagctgaatctggaggcggaatttcatttcactcatctcattatgacgttcaagacattt
cgtcctgctgcaatggtgattgaacggtcctctgattttgggaatacctggcaagtgtat
cgttattttgcttatgactgcgagtcatctttcccatctgtctcacgaggacctatgaag
aaagttgatgatgtaatatgtgactctcgatattcagacattgagccttctacagaagga
gaggttatcttccgggttttagatcctgcatttagaatcgaagatccttacagccccaga
atccaaaacatgttgaaaatcacaaacctaaggatcaagtttacaaaagtacatacgtta
ggagacaacttgctggactccagaatggaaattaaagagaagtactactatgctatctat
gacatggttgtgcgtgggaactgcttctgctatggtcatgccagtgaatgtgcccctgta
gatggtattggagaagatgtagaaggaatggtacatgggcattgtatgtgtaatcacaac
accaaaggtctgaattgtgaacaatgcaaagacttctatcatgatttaccctggagacca
gctgaaggacgcaataccaatgcctgcaaaaagtgtaactgcaaccagcattccaacatc
tgccattttgatatggcagtttacatgtccactgggaatgtcagtgggggagtgtgtgac
aattgccaacacaataccatgggacgcaactgtgaacaatgcaagcctttttatttccag
catccagagagagacattcgtgatcctaacatttgtgaacaatgtaattgtgaccccgtt
ggttctctcaatggtggaatatgcgatcgacacactgacgtctcctctggtctcattgct
ggacagtgtcgttgcaagcccaacgtagagggggaacgttgtgatcagtgtaaacaagga
tactatggaataagtgatgacccactggggtgccagccttgcacgtgcaatcctctggga
actgtcccaggaggaagtccatgcaatgtagagacaggaaactgcttctgcaaacgcttg
gtaactgggaggaactgtgaccagtgtctggcacagcactggggattgagcaatgatatg
gatggatgtcgcccatgtgactgtgaccaagggggagctatcaataacgattgttctgca
gaaactggacagtgtcagtgtcgtgatcacatgtttggacgccagtgcagtgaagtggaa
tctggattttactttattgctctggaccattacacgtatgaagcagaggatgccacccta
gggccaggagtgacaattgtacagagaccctaccctcaggatcggacacctacatggaca
ggtattgggtttgtgagtgtaccagagggagcctacctggagttctacattgacaacatc
ccgcattctatggagtatgatattctgattcgctacgaacctcagttaccagacaagtgg
gaagaggttgttgtaagagtggatcgtcctagcataatttccactgggagcagatgtgtg
aatacagtgcctgatgatgacaaccaagtggtgtcactacctccaggttccagatatgtg
gttcttccaaggcctgtgtgttttgaaaggggactgaactatacagtccgtctcagcttg
cctttttactccaatctgagcgagatccagagtccatacactctgattgattctattgtt
ctcatgcctcactgtaaaagccttgaaattttcactggagcttccggggaagatgttatc
acaaacagtgcatgggaaacgttccagaggtaccgctgtctggagaacagccagagtgta
gtgaaaacccccatgacagacatctgcaggaacttcattttcagtatttctgcactgctt
caccaaggagccttgagctgtcagtgtgacccccaaggttccttaagcactgtgtgtgat
cctaatggaggtcagtgccagtgcaggcccaatgtggtgggaagaaactgtgaccagtgt
gctcctgctacctatttatttggaccaagtggctgtagaccctgtgagtgtaaccctcat
ggctctgttaacagtttctgccatgtggcaactggtcagtgtgagtgtattcatggcaca
tatggacgtcagtgtgacaagtgtctgccgggttactggggatttcctacttgccgctcc
tgtaactgcaatgggcacacagaccactgtgaccctcagacaggggagtgcttgggctgc
aaggatcatactactggactcaactgcgaaagatgtttagatgggtactatggagatcca
gtcctgggctcaggggatcactgtcgcccttgtctatgcccagatggtccaggcagcgga
cgccagtttgccagtgcctgctatcaaagcagagattccctccaagtgttttgtgtctgt
aaccagggatacaaaggtgccaggtgtgatgagtgttctccaggttactatggcaatcct
aatgaagttggaggaatatgccggccatgtcagtgcaataacaatattgacatgctggat
ccgggttcctgtgatgcgcatacaggaatttgtctgaaatgcctgtaccacactgagggt
gaaaactgtcgtcgctgcaagcttggatactttggagatgctctaactcaaagttgtaga
aaatgtgtttgtaaccacctgggcacagcaaatgaaacttgtccttcagctgccgactgt
cactgtgatttggccagtgggcaatgtcagtgtcttcctaatgtgattgggcagaattgt
gaccaatgtgctcccgacacctggaatttggctagtgggacaggttgtgaaccctgtgat
tgtgatgaaaccaattccctgggatcttcttgcaatgaatggacaggtcagtgttcctgc
aatcctggatttggaggaagaacatgccgagactgcaaggagctctactggggtgatccc
aatgttgagtgcaaagcttgcgactgtgatgccagaggtatccagacttttcagtgcgac
tcagccacaggacattgtatctgcaagcaaggcgtgtcaggtcccagatgcaacgagtgt
gcccgagggtactctggtgttttccctgactgtgtgcagtgccatcagtgctttgatgtg
tgggacactgttattagagacttaaccaataaaacacacaaactgatacagagagctaac
tcagttaaagcaagtggaataactggaccataccaggagacaattaatgcagtggagcaa
agtgcttataacatcaaagatatacttgctcagaatccagcagcccagccactaagtgat
cttcaggatctcctggaaaatgcaaaaaaagtaatcattgaagtgactgagaaaataaac
agcacagaagggacactttcagaaacatcagctaataagaacagcactaactccaagtta
gatgctcttaaagaagatgctcagaatttggagaaatctgtgaaggacctgttaggtcaa
gtggaattgataaaaaattccgatgttcgaggggcatcagacagtgtcagcaagtatttc
cagcagtctatggatgctgaagcgagggtaaatgcatccaccactgaccctggcaacact
gtagaacaatcatctgcaatccgccaacaagtggaagataagatgaatgaaaccagactt
caatttgatgaaaaccaagcagaatattccaaaagactggatgatcttgctggtcaacta
gaatccctagacctcactgagctcagtgaaaagacttgtggaccctctgaaggcactact
tgctctgagtcacactgcggtggattaagctgccagggtgaagatggcaccaggaagtgt
ggaggcaagaactgcgacggcctggtgactctggcaaatgatgcctggcaaaaagctaaa
gactttgacagcgaaattcttaatgccctggaagaagttgacaggctatctaagatggta
tctgaggctaaactcaaggctgatgaagccaagctcagtgctcaggaggttcttcagaaa
accaaccaaaccaagcagaaagtggatcaaagcaacgaagatcttcgtaaacttatcaag
cagatacgagagttcttaatgcaagatggtgctgatcttgaaagcattgaggctgttgct
aatgaagtgttagaaatgcagatgcccaccacaccagcacagctccagaatttgacagat
gaaattcgtgagcgagtggggagcttgtctgatgtagaggccattctaacccaaagttca
gcagacattcatcgagcagaaacactacttgatgaagctaagaaggcaggtaaggaggca
acagacatcaagaacactgcagacagggtgaaaaaagccctggaggaggcagaaaaagcc
caaactgctgtagcagaagccatcgaacaagctggcaaagacattcaggggaccaatgac
ttcttgacctctgtggagtctgaaactgcaaactcagaattcaaattgaacaatgcaacc
cagagattacttcagctggaaaaagacattgatgaccttaaacaaaaagcactcacaaac
attgctactgcagatgaaattgagaaatcaactgataaaatacaagaggatgccaatgaa
gccaaaaaggaactagatagtgaactgaagaataaatacaacgatgtagaagatttgatt
gttaaaaagactgaaggtgtggcagatgcaaggaagagggcagaagagcttcagaatgaa
gccaaggaactgttatcacacgcaagcaggaaacttcagcttctaaaagatttagagaaa
tcttatgaagacaatcagagaaccttagaagagaaagcaaatcagcttgtagacctggag
aaggcagtgcgggatcttttgcaagaaatcagccagaaggttacagtttacagtacatgc
ttgtaa

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