Lepisosteus oculatus (spotted gar): 102692791
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Entry
102692791 CDS
T07349
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04136
Autophagy - other
loc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102692791 (atg13)
04136 Autophagy - other
102692791 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102692791 (atg13)
03029 Mitochondrial biogenesis [BR:
loc03029
]
102692791 (atg13)
Membrane trafficking [BR:
loc04131
]
Autophagy
Autophagosome formation proteins
ULK complex
102692791 (atg13)
Atg1 complex
102692791 (atg13)
Mitochondrial biogenesis [BR:
loc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
102692791 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
102692791
NCBI-ProteinID:
XP_006642731
Ensembl:
ENSLOCG00000005677
LinkDB
All DBs
Position
LG27:12283201..12297009
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AA seq
546 aa
AA seq
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MDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKRALGGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLAGLGEGFQTVRVGIVGTPV
GTVTLSCAYRTNLAFMSTRQFERTAPIMGIIIDHFVDRPFPNMGPMHPCNYRTTGEDDGV
MYPGVEDSQEVCTTSFSTSPPSQCVSTLSKTHSQALKPTVMDTLKVPMLGLAFSHQLYSS
RLSYQPPALGTADLCYPAVFNAAHPHQMAIPGKEGGVPQALVQPCHGAQAEHGRASTCPP
ADTAQQVPATPSSSGEETDPLSRSSEAKGTSPPDFVETTFTRKVGAFVNKPATQVTTATL
DLPFAAFAPRTFDPEENDLMVNPPESPLPASPLQTSLHSHDSSGSSGPTQDDFVMVDFKP
AFSKDDILPMDLGTFYREFQNPPQLSSLSIDISAQSMAEDLDSLPEKLAMYEKNIDEFDA
FVETLQ
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgatttgagcccacaggataaaaaggacttggacaaattcatcaaatttttt
gccttaaagacggtgcaggtgattgttcaagcccgacttggggagaagatctgcacccgc
tcctcatcctcgcctactggctctgactggttcaatctagcaataaaagacatcccagaa
gttacccatgaggctaaaagagctctgggtggtcagcttccaggaattgggaggtccatg
tgtgtggaaatctcccttaaaacctcagagggagattcaatggaactggaaacatggtgt
ttggaaatgaatgagaagtgtgataaagatattaaagtgtcatacactgtttacaacaga
ctgtctctactgcttaaatcattgctggctataacgagggtgacacccgcctacaagcta
tcaaggaaacaaggccatgactatgtcattctgtacaggatatattttggtgaagtgcaa
cttgcagggcttggagaagggtttcagactgtacgtgtagggatagtcgggactccagtc
ggtaccgtcactctgtcctgtgcttatagaactaatctggcttttatgtcaaccaggcag
tttgagaggactgctcctataatggggatcatcatagatcattttgttgaccgccccttc
cccaatatgggacctatgcacccttgcaactacaggacgacaggtgaagatgatggggtg
atgtatcccggagttgaggattcccaggaggtctgcacaacatccttctccacctctccc
ccctcccagtgtgtgtccaccctaagtaagacacactctcaggcactcaaacccacagtg
atggacactctgaaggtccccatgctggggttggctttctcacaccaactgtacagctct
cgtctttcctatcagcctcccgcgctcggaacagctgatctttgctatcctgctgtcttt
aacgctgcccatccccaccagatggcgataccagggaaggagggaggggtgccccaggcc
ctggtgcagccttgtcacggggcacaggcggagcatggcagagcgtccacctgcccccca
gcagacactgctcagcaagtcccggccaccccctccagcagtggggaggagacggatccc
ttatccagaagcagcgaggcgaagggcacctccccaccggattttgtggagaccaccttt
acaaggaaagtgggggcctttgtgaacaaacctgccacccaggtgactacagctactttg
gatctgccttttgctgcgtttgctccaaggacttttgacccggaagaaaatgaccttatg
gtgaacccccctgaatctccgctgccagcatcgcctctgcagaccagcctgcactcccac
gactccagtgggagcagcggaccgacgcaggatgacttcgtcatggtagattttaagcct
gccttttccaaggatgatatccttcctatggacctgggtacgttttacagagagttccag
aatccccctcagctcagcagcctctccattgacatcagtgcacagtctatggcagaagac
ttggactctctgcccgagaagctggccatgtacgagaagaacattgacgaatttgatgct
tttgtagagaccctgcagtaa
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