KEGG   Lepisosteus oculatus (spotted gar): 102692813
Entry
102692813         CDS       T07349                                 
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X2
  KO
K08493  vesicle transport through interaction with t-SNAREs 1
Organism
loc  Lepisosteus oculatus (spotted gar)
Pathway
loc04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:loc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    102692813 (vti1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:loc04131]
    102692813 (vti1a)
Membrane trafficking [BR:loc04131]
 SNARE
  SNAP-25[N] (Qb)
   Vti1
    102692813 (vti1a)
SSDB
Motif
Pfam: V-SNARE V-SNARE_C Laminin_I Mer2 MgtS-like Sec20 SDG2_C CAP59_mtransfer Exonuc_VII_L
Other DBs
NCBI-GeneID: 102692813
NCBI-ProteinID: XP_006630835
LinkDB
Position
LG5:complement(34158741..34339531)
AA seq 217 aa
MSSDFETYEQDFSTLTAEITNKIGKVPKLGGEEKKQMVLNVEKQLEEARELLEQMDLEVR
EIPVQSRGMYNSRLKSYKQELDKLEKDFKRSRIAYSDEVRNELLGDDGNSSESQRAHLLD
NTERLERSSRRLEAGYQIAVETEQVGQEILENLHLDREKIQRSRDRLRETDANLGKSSRI
LTGMLRRIIQNRVLMFVLGAIILFTIVLAIYFSVRGH
NT seq 654 nt   +upstreamnt  +downstreamnt
atgtcttcggatttcgaaacttacgagcaggactttagcacgttgacggcagaaattact
aataagatcgggaaagtccccaaactgggaggagaagaaaagaaacaaatggttctaaat
gtcgagaaacagcttgaagaagcaagggagttgctggagcagatggaccttgaggtgcga
gagatccctgtccagagccgaggcatgtacaacagcaggctgaagagctacaagcaggag
ctcgacaaactggagaaggatttcaaaaggtcacgcatcgcctacagtgacgaggtgcgg
aatgagctcctgggggatgatgggaattcctccgagagtcagagagcacatctgctggat
aacacagagaggttggaaaggtcatcgcgaagactagaagctgggtaccagatagctgtg
gaaaccgagcaagttggccaggaaattttagaaaatctccaccttgacagagaaaaaata
cagagatccagagaccggcttcgtgaaacagatgcaaatctggggaagagctctcgaatc
ctgacaggaatgttgcgcagaatcatccaaaatcgtgtcctgatgtttgttctgggggct
atcatccttttcaccatcgtgctggctatttatttttctgtcagaggacactga

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