Lepisosteus oculatus (spotted gar): 102692969
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Entry
102692969 CDS
T07349
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102692969 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
loc03041
]
102692969 (u2surp)
Spliceosome [BR:
loc03041
]
Complex A
U2 snRNP components
U2 related factors
102692969 (u2surp)
Complex B
102692969 (u2surp)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
RRM_7
SET_assoc
Motif
Other DBs
NCBI-GeneID:
102692969
NCBI-ProteinID:
XP_015216761
Ensembl:
ENSLOCG00000007828
UniProt:
W5MMB0
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All DBs
Position
LG14:complement(15333405..15349317)
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AA seq
970 aa
AA seq
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MADKTPGGAQKASAKTLLESKLKSFSIGKMSAAKRTLSKKEQEEIKKKEDERAAAEIYEE
FLAAFEGGDGSKVKAFVRGGIANASKEESEADEKKGKLYKPTSRFVEPKSSLPVEKPPQF
FVHDKRPSLKKGEKEKKKSNLELFKEELKQIQEERDERHKMKGRISRFEPLSSMDARRSS
DGSSRRNRPSSVLDDSAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKI
MWPRTDEERARERNCGFVAFMSRRDAERALKHLNGKMIMNFEMKLGWGKAVPIPPHPIYI
PPSMMEHTLPPPPSGLPFNAQPRERLKNPNAALLPPPKNKEEFDKTLSQAIVKVVIPTER
NLLSLIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQSPAHVYYRWKLYSILQGDS
PTKWKTEDFRMFKNGSMWRPPPLNPYLHGSLDDEDKESEEETTKKGSLKEEQRDKLEEML
RGLTPRKNDIADAMLFCLNHAEAAEEIVECIAESLSILKTPLPKKIARLYLVSDVLYNSS
AKVANASYYRKYFESKLCQIFSDLNATYKTIQGHLQSENFKQRVMSCFRAWEDWTVYPEP
FLIKLQNIFLGLVNLSGEKDVAPSVVVEPEVAEDLDGAPIEEELDGAPLDDVDGVPIDTA
PIDGAPLDDLDGVPIKTVDDDLDGIPLEAPSQSKEPAFKMAPSKWEAVDESELEAQAVTT
SKWEIFDQPEESEGEQKKEEEETDDDDDTRSSRSEEQSLFSNPIKEESSDSKFSGKYSEM
SEEKRAKLREIELKVMKFQDELESGKRPKKSGQSIQEQVEHYRDKLLQREKEKEVEREKE
RDKKDKDKSEVRCKEKKEKDDSTPTRKERKRKHSGSPSPSRSSRRGKSPSPRSERSDRSY
VKESSRSRSSHKDSPRDTSKKSSKRSPSAPRTPKRSRRSRSRTPKKSGKKSRSSSRSPHR
SHKKSKKSKH
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaaacgcctggcggtgcgcagaaagctagcgcaaagactctattggagagc
aagttaaagtccttcagtattggcaagatgtctgctgctaagagaactctcagtaagaag
gaacaagaagaaattaaaaagaaggaggatgagcgagcagcagcagagatatatgaagaa
tttcttgctgcgtttgaaggaggagatggaagtaaagtgaaagctttcgttagaggaggc
attgcaaatgcatcaaaagaagaatctgaagcagatgagaagaaaggcaaactgtacaaa
ccaacatctcgttttgtggagcccaaaagttctttgcctgttgaaaaacctccgcaattt
tttgtacacgataaaaggccttcattaaagaagggagaaaaggaaaaaaagaagagcaat
ttggaactcttcaaagaagaattaaaacaaattcaggaagagcgtgatgagcgacataag
atgaagggccgaatcagcagatttgaacctctgtctagtatggatgcgagacgatcttcg
gatggttcttcaagaagaaaccgtccgtccagtgttctcgatgactccgcgcccggttcg
catgatgttggggatccttctaccactaatttatatcttggaaatataaaccctcagatg
aatgaagagatgctgtgtcaggagtttggccgctttggtcctttagccagtgtgaagatc
atgtggccaagaaccgatgaagagcgtgctagggaacggaactgcggctttgtggcgttt
atgagtagaagagatgcggaaagagcattaaaacatttaaacggaaagatgattatgaat
tttgaaatgaagctgggatgggggaaagctgtaccaatcccccctcaccccatatacatt
ccaccttctatgatggagcacacccttccaccacctccatcagggcttcctttcaatgca
cagccaagagagaggttgaagaaccccaatgccgcattgctcccccctcccaaaaacaaa
gaggagttcgataagactctgtcgcaagccatagtcaaagtggttatcccaacagaaagg
aatttgctctctctgatacatcgaatgatcgagtttgtggtgcgtgaaggacctatgttt
gaagctatgatcatgaaccgagagattaacaacccaatgtttaggtttctttttgagaat
caaagcccggctcatgtttactacaggtggaagttatactccatcttgcagggagactct
ccaactaaatggaagacggaagacttcagaatgtttaagaatgggtcaatgtggcgtccg
cctcccctgaacccatatctgcatgggtcgcttgatgatgaggataaggagtctgaggaa
gagacaaccaaaaaaggctctctaaaagaagaacaaagagacaaattggaggagatgttg
cgtggcctgacaccgcggaagaatgatatagctgatgcgatgctattctgtctgaaccat
gcagaagctgctgaagaaatagtggagtgtattgctgaatcattgtctatactgaagact
ccactgccaaaaaagattgcacggttatatttggtatcggacgtgttgtacaattcatct
gcaaaagttgccaatgcttcttattatagaaaatactttgaatctaagctctgccagata
ttttcagacctcaatgccacatacaagacgatacagggccatttgcaatctgaaaacttc
aagcaaagagttatgtcctgcttcagagcatgggaggactggactgtttatcctgagccg
tttctaatcaaactccagaacatcttccttggtctggtcaacctcagtggggagaaagat
gtcgctccatctgttgtcgtagagcctgaagttgcggaagatcttgacggggctcctatt
gaagaagagctcgatggggctccactggatgatgtggatggtgtacctattgacactgcg
cccatagacggtgctcctttagatgacctagatggagttccaataaagacagtagatgat
gaccttgatggtattcctttggaagctcctagccagtcaaaggaacctgcttttaaaatg
gcgccatctaaatgggaagcagtagatgagtccgaactcgaagcacaagcggttacaaca
tcaaagtgggaaatatttgatcagcccgaagaatctgaaggagaacagaaaaaggaagaa
gaagaaactgacgatgatgatgataccaggagttctcgatcagaagagcagtcgctcttt
tccaacccaataaaagaggaatcctccgactccaaattttctggaaagtactctgaaatg
agtgaagagaagcgtgccaaactaagagaaattgagctaaaagttatgaagtttcaagat
gaattggagtctgggaaacgacccaagaaatctggacagagtattcaggagcaagtggaa
cattatcgtgataaactattgcaaagggaaaaagaaaaagaagtggaaagagaaaaggag
cgggacaaaaaagataaagacaaatcagaagttcgttgtaaagaaaagaaggaaaaagat
gattcaacgccaaccagaaaggagaggaaacgaaagcacagtgggtctcccagtccttcc
cggagcagcagaagggggaagtccccgtcccctcggtctgagcgatcggacaggtcatat
gtaaaggagagctctcggtctaggtcctcacataaagattctccaagagacactagtaaa
aagtcttcaaaaaggtcaccttcagcacccaggacacccaagaggtctcggcggtctcgt
tctaggacacccaaaaaatcaggcaagaaatccaggtcatcatccagatctccacatcgg
tctcataagaaatcaaagaaaagcaagcactga
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