Lepisosteus oculatus (spotted gar): 102692980
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Entry
102692980 CDS
T07349
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03030
DNA replication
loc03410
Base excision repair
loc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102692980 (pole)
03410 Base excision repair
102692980 (pole)
03420 Nucleotide excision repair
102692980 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
loc03032
]
102692980 (pole)
03400 DNA repair and recombination proteins [BR:
loc03400
]
102692980 (pole)
Enzymes [BR:
loc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
102692980 (pole)
DNA replication proteins [BR:
loc03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
102692980 (pole)
DNA repair and recombination proteins [BR:
loc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
102692980 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
zf-RRPl_C4
GARP
APP_N
Motif
Other DBs
NCBI-GeneID:
102692980
NCBI-ProteinID:
XP_015221455
Ensembl:
ENSLOCG00000003978
UniProt:
W5M8S6
LinkDB
All DBs
Position
LG20:complement(5627997..5655880)
Genome browser
AA seq
2298 aa
AA seq
DB search
MVLQNSGRFKADRGQGGDQENQQDETTSLSALKRLERSQFTDEMDARFGFERMKEPGEKT
GWLINMHPAEVLDEDKRMISCVDYYFIQEDGSKFKVALPYKPYFYIATKKNCEREVISFL
SKKFQGKIAKLEIVLKEDLDLPNHLVGLKRSYIRLSFNTVDDLIKVKREISPAVRKNRER
EKSNDAYTAMLSSALSGGNVVAPDEDGASKKITDQLDNIVDMREYDVPYHVRLSIDLKIH
VAHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAESDQIMMISYM
IDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEPDEASLIQRWFEHIHETKPNIF
VTYNGDFFDWPFVETRAAHHGLNMHREIGFQKDGQGEYKASQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKLTDDGHVLDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEHTLRHAIEEEEKIPLEQVLNFSEV
CEDIKKKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEVTCAACDFNKP
GANCQRKMTWQWRGEFMPASRSEFHRIQQQLESEKFPPLFPNGRPQAFHELNREEQARHE
KKRLADYCRKAYKKVHLTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SAAQECGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVIRSSNEKKPKVTISYPGAMLNI
MVKEGFTNHQYQELTDPATLTYETRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYSSVAKVADYWLDVLYS
KAANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPALHDLDIRTILDWNYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVVSNQ
LAVGSSQCSEVGEIGDLEDFGVKRGPLQPAIPISTKRKRVSLGTDSQAESQELELTQSWR
EILGPPPPMGKTKEERLVWLRYHKKKWELQARQRKERRKKRRLDDGGAQPAGGGVIRGGP
TTGLGSFLRRTARSILDMPWQIVQIAETSHPGLHKLWAVIGSDLHCMKLNIPRVFYVNQR
VPKQEEGPMYKKVNRMLPRSNMVYHLYQYSVPEDMYQEHINEINADLSAPDIEGVYETQV
PLLFRALVQLGCVCMVNKQLARDLANREADTFDLDHLEMRSLAQFSYLEPGSVRHIYMYH
HSQGHKALFGLFIPSQRKASVFVLDTVRSNQMPNLGTLYSVERSALLEKMGEELLPPEKH
NFEVRAENDPKAIYRALQRTLLNYKDERRGPTLIAVQSNWELRRLAAGLSVLEDFPVVPV
HVIDEINYNVLDWQRHGARRMIRHYLNLDSCLSQAFDMARYYHLPVGNLPEDVSIFGSDL
FFARHLRRHNHLLWLSPSARPDLGGKEADDSRLVMENEERSSVEINAPGCYSTVCVELDL
QSLAVNTILQSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASSLASYDETALCSNT
FRILKSMVVSWVKEITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQ
LVAEFKRLGSSVAYGNFNRIILCTKKRRIDDAIAYVEYITNSIHSREIFHSLSMTFSRCW
EFLLWMDLANYGGVKGKLPASVLYGQEGAAKVAEKADGEEDSEDEAGPSEEEEEEEGDVD
NVEELIESNWNIMQYLPQNASCQKYFLMIVSAYIAAVYHSMREELRRNAPGATPIKRRGS
SQVSQEAAGDANALPGMITFSQEYVSSELTQSFFTITQKIQKKVTGTRNVTQPSDMFPVL
PGSHLPLNNPALEFIKYVCQVLSLDSNITNQVNKLKRDLLRLVDVGEFAEDAQFRDPCQS
YILPEVICRQCNFCRDLDLCKDSSVAQDGSVLPQWFCSNCQAQYETEGIEMALVEALQKK
LMTYTLQDLVCNKCKGVKEANMPVYCSCAGDFTLTLSTKSFSEQIGVFRNIAAHYSMAFL
QETVDWVLRMSPQLGKAS
NT seq
6897 nt
NT seq
+upstream
nt +downstream
nt
atggttctacaaaacagcgggaggtttaaagcagaccggggacaaggaggtgaccaggaa
aatcagcaggatgaaaccacctccttgtcagccctcaagcgcctggagcgcagccagttt
accgacgagatggatgctcgcttcggcttcgagaggatgaaggagcccggggagaagacg
ggctggcttatcaacatgcacccggctgaagtgctggatgaagacaagaggatgatcagt
tgtgtagactattatttcatccaggaggatggcagcaaattcaaggtggcgctcccatat
aaaccctatttctacatagcgactaaaaagaactgcgagagagaggtaatttccttcctg
tcgaagaagttccaggggaagattgcgaagttggagattgttctcaaggaggacttggat
ctgcccaatcacctggtggggctgaagaggagctatatcaggctgtccttcaacactgtt
gatgacctcatcaaagtgaaaagggagatctcgcccgccgtgcgcaagaatcgggaacga
gagaagtccaatgacgcctacactgccatgctgtcgagtgccctatcggggggcaatgtg
gtggccccagatgaagatggggcttcgaagaagatcacagaccagctggacaatattgtg
gacatgcgggagtatgatgtgccctatcatgtccgtctgtccatcgacctcaagatccat
gtggctcactggtacaacgtgcgctaccgtggcagtgcctatccccccgagatcgtgcgc
agggatgacctggtcgagcggccggaccctgttgtgctggcctttgacatcgagaccacc
aagctgcctcttaaattccccgatgctgagagtgaccagatcatgatgatctcgtacatg
attgatggacagggatacctgataacaaacagggaaattgtctccgaggatattgaggac
tttgagttcacccccaaaccagagtatgagggacccttcaccgtgtttaatgagcctgat
gaggccagtttgatccagaggtggtttgagcacatccacgagaccaagcccaacatcttt
gtcacctacaacggagacttctttgactggccctttgtggagacccgggcggcccatcac
gggctcaacatgcaccgcgagatcggctttcagaaggacggccaaggggagtacaaggcc
agccaggccatccacatggactgcctcaggtgggtgaagcgcgacagctacctgcccgtg
gggagccacaacctaaaggcggcggcgaaggccaagctggggtacgaccccgtggagctg
gatccagaggagatgtgccgcatggccaccgaggagcctcagactctggccacatactcg
gtgtcggatgctgtcgccacttactacctctacatgaagtatgtccaccccttcatcttc
gctctgtgcaccatcatccccatggaaccagacgaggtgctccggaagggctctgggacg
ctctgcgaggctctgctcatggtccaggccttccacgccaacatcatcttccccaacaag
caggagcaggtcttcaacaaactgacagacgacgggcacgtgctggactccgagacgtac
gtggggggccacgtggaggccctggagtcgggcgtctttcgcagcgacatcccctgtcgc
ttcaaaatgaacccagcggcctttgacttcctgctgcagagagtggagcacaccctgcgc
catgccattgaagaggaggagaagatccccctggagcaggtccttaatttcagtgaggtg
tgtgaggatatcaagaagaagctgatctccctgaaggaggtgccaaacaggattgagtgt
cctctcatttaccatctggatgtgggtgccatgtaccccaacatcatcctcaccaaccgg
ttgcagccctcggctatggtggatgaggtcacttgtgctgcctgcgacttcaacaaaccg
ggagccaactgccagaggaagatgacttggcagtggagaggggagttcatgccggccagc
cgcagcgagttccaccgcatccagcagcagctggagtcggagaagttccccccgctcttc
cccaacgggcggccacaggccttccacgagctgaaccgcgaggagcaggcgcgccacgag
aagaaacgcctggctgactactgccgaaaggcttacaagaaggtccacttgacccgactg
gaggagcgggtcaccaccatctgccagcgagagaattctttctatgtggacacagttcgc
gcctttcgagatcgccgatacgagttcaaagggctgcacaaggtctggaagaagaagctg
tcggcggcgcaggagtgcggggacgcggccgaggtgaagcgctgcaagaacatggagatc
ctgtacgagtccctgcagctcgcccacaagtgcatcctcaactccttctacggctacgtc
atgcgcaagggggcgcgctggtactccatggagatggctgggatcgtgtgctatactggc
gccaatatcatcacgcaggccagggagctgatcgaacagatcggccggcccttggagctg
gacaccgatgggatctggtgcgtgcttcccaacaccttccccgagaacttcgtcatcaga
tccagcaatgagaagaagcccaaggtcaccatctcgtaccccggggcaatgctcaacatc
atggtgaaggagggctttaccaatcaccagtaccaggagcttacagatcccgccacactc
acctacgagacccgatctgagaacagcatcttttttgaagtggatggcccttaccttgcc
atgatcctgcctgcctccaaagaggagggcaagaagctgaagaagaggtatgcggtgttt
aatgaggacggctccctggcggagctgaagggcttcgaagtgaagcgccggggggagctg
cagctcatcaagatcttccagtcctctgtgtttgaggccttcctcaagggcaccacactg
gaggaggtctactcctctgtggccaaggtggccgactactggctggacgtgctttacagc
aaggcggctaacatgccggacgcagagctgttcgagctgatctcggagaaccgctccatg
tccaggaagctggaggattacggcgagcagaagtccacctccatcagcacggccaagcgg
ctggccgagttcctgggggaccagatggtgaaggacgctgggctgagctgccgctacgtc
atctcgcgcaaaccggagggatccccggtcaccgagagggctatccccttggccatcttc
caggcagagccgagcgtgaagaagcacttcctgcgcaagtggctgaagatgccagccctg
catgacctggacatccgcacaattctggactggaattactacattgagagacttggcagc
gccatccagaaaatcatcaccatcccagctgccctgcagcaggtgaaaaatcctgtaccc
agggtgcggcatccggactggctgcacaagaagctgctggagaaaaatgatatctacaaa
cagaagaagatcagcgagcttttcaccagcgagggcaagagacaggtggtttctaaccag
ctggcagttggaagcagccagtgctcagaagttggggagataggcgacctggaggacttt
ggggtgaagcggggacccctgcagccggccattcccatcagtaccaagcgcaagcgggtg
tccctggggacggatagccaggccgagtcccaggagctggagctcacccagtcctggagg
gagatcctcgggccacctccacccatgggcaaaacgaaggaggagaggctggtgtggctg
cggtaccacaagaagaagtgggagctgcaggcgcggcagaggaaggagcgcaggaagaaa
cggcggctggatgacggcggggcccagccagcgggagggggcgtgatcaggggcgggccg
accaccggcctgggcagcttcctccgcaggaccgcgcggagcatcctggacatgccctgg
cagatcgtacagattgcggagaccagtcacccaggcttacacaagctgtgggcggtgatc
ggcagcgacctgcactgcatgaagctcaacatcccccgcgtcttttacgtcaaccagcgg
gtgcccaagcaggaggaggggcccatgtataagaaggtcaaccgcatgctgccacgctcc
aatatggtgtaccacctgtaccagtattcggtccctgaggacatgtaccaagagcacatc
aacgagatcaacgcagatctctctgcccccgacattgaaggcgtctatgagactcaggtt
cccctcctcttccgggcactggtgcagctgggctgtgtgtgtatggtcaataagcagctg
gcgagggacctggccaaccgcgaagccgacacctttgacctggaccacctggagatgagg
tcgctggcccagttcagctacctggagcctgggagtgtgcgccacatctacatgtaccac
cacagccagggccacaaggctctcttcggtcttttcatcccctcccagcggaaggccagc
gtcttcgtcctggacacggtccgcagtaaccagatgccgaatctcggcacgctgtattcc
gtcgagcgttctgctctgctggagaagatgggcgaggagctcctccccccggagaagcac
aacttcgaggtgcgagccgaaaatgaccccaaggccatctaccgcgcccttcagagaact
ctgctcaactacaaggacgagcggcgcggacccacgctgatcgcggtccagtccaactgg
gagctgcggaggctggcagctgggctgtctgtcctggaggacttccccgtggtgccagtc
cacgtcattgacgagatcaactacaacgtgctggactggcagcgccacggggcccgcagg
atgatccggcactacctcaacctggacagctgcctctcgcaggccttcgacatggccagg
tactatcacttgccggtgggaaacctccctgaagacgtgtccattttcggctcagacctc
ttcttcgctcgacacctccgtcgacacaaccacctgctgtggctctccccttctgcccgg
ccggacctggggggcaaggaggccgacgacagcaggctggtgatggagaacgaggagcgg
agctccgtggagatcaacgcccctggctgctattccacagtgtgcgtggagctggacctg
cagagcctggctgtgaacaccatcctgcagtcccagcacgtcaacgacatggagggcggc
gccagcctgggcgtcagcttcgatgtcatccagcaggcctccctggaggatatgatgtct
gggaaccagggtgccagctccctggccagctacgacgagacagcactctgctccaacaca
ttcaggattctgaagagcatggtagtgagctgggtgaaggagatcacgcagtatcacaac
gtctacgctgacaaccaagtgatgcatttctaccgctggctgcgctcccccagttccttg
ctgtatgacccagcactccaccgcacgctgcacaacatgatgaagaaggtcttcctgcag
ctcgtagccgagtttaagcgtctgggctcctctgtcgcttatggcaacttcaaccgtatc
atcctctgtaccaagaagcgcaggatcgacgatgccattgcgtatgtggagtacatcact
aacagcatccattcgcgggagattttccactccttgtccatgactttctcgcgctgctgg
gagttcctgctgtggatggacttggctaactatgggggagtgaagggcaaactgccggcc
agcgttctttacggacaggagggcgccgcgaaggtggcggagaaagcggacggagaggag
gacagtgaggatgaggcaggaccgtcggaagaggaggaggaagaagagggtgatgtggac
aacgtagaggaactcattgagagcaattggaacatcatgcaatacctcccccagaatgcc
tcttgccagaaatatttcctaatgatcgtctcagcctacatcgccgctgtctatcacagc
atgagggaggagcttcgccgcaatgctccaggagccacgcccatcaagaggaggggcagc
agccaggtttcccaggaggccgcaggagatgcaaatgccctgccaggaatgatcaccttc
tcccaggagtatgtctccagtgagctgacccaaagcttctttaccatcacccagaagatc
cagaagaaagtgacgggcaccagaaacgtcacccagccctccgacatgttccctgtgctg
ccaggttcccacctgcccctgaacaaccctgcattagagttcatcaaatacgtctgccag
gtgctttctctggactccaacatcaccaaccaggtgaataaacttaagagggacctcctg
cgcctggtggacgtgggcgagtttgcggaagatgcccagttcagagatccctgccagtct
tacatcctccctgaggtcatctgccgacaatgtaacttctgccgagacctggacctctgc
aaggactcgtctgtggcgcaggatggctctgtgctgccacagtggttctgctccaactgc
caggctcagtacgagacagaggggattgaaatggctctggtggaggcactgcagaaaaaa
ctgatgacctacaccctgcaggacctggtttgtaacaagtgtaaaggagtaaaggaagcc
aacatgcctgtctactgtagctgtgctggagacttcactctcactctgtccacaaagagt
ttttccgagcagatcggcgtgttccggaacatcgctgctcactacagcatggccttcctg
caggagacggtcgactgggtgctgaggatgagcccccagctgggaaaagcatcttaa
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integrated database retrieval system
