KEGG   Lepisosteus oculatus (spotted gar): 102693045
Entry
102693045         CDS       T07349                                 
Symbol
rbbp7
Name
(RefSeq) histone-binding protein RBBP7 isoform X4
  KO
K10752  histone-binding protein RBBP4
Organism
loc  Lepisosteus oculatus (spotted gar)
Pathway
loc03082  ATP-dependent chromatin remodeling
loc03083  Polycomb repressive complex
loc04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:loc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102693045 (rbbp7)
   03083 Polycomb repressive complex
    102693045 (rbbp7)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    102693045 (rbbp7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:loc03036]
    102693045 (rbbp7)
Chromosome and associated proteins [BR:loc03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     102693045 (rbbp7)
  Histone modification proteins
   HAT complexes
    HATB complex
     102693045 (rbbp7)
   HDAC complexes
    Sin3A-HDAC complex
     102693045 (rbbp7)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     102693045 (rbbp7)
    PRC2.2
     102693045 (rbbp7)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     102693045 (rbbp7)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    102693045 (rbbp7)
  Chromatin remodeling factors
   NuRD complex
    102693045 (rbbp7)
   NuRF complex
    102693045 (rbbp7)
   NuRF complex (fruit fly)
    102693045 (rbbp7)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 CAF1C_H4-bd Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 DSE1_N WD40_WDHD1_1st WD40_Gbeta Beta-prop_Aladin Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_EML EIF3I Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_DCAF12 WD40_RFWD3 ANAPC4_WD40 Beta-prop_RIG_1st Beta-prop_NOL10_N eIF2A WD40_MABP1-WDR62_1st ASA1 Beta-prop_WDR41 CFAP251_N PAC11 Beta-prop_SPT8 Beta-prop_IFT140_1st MIOS_WD40 NBCH_WD40 Beta-prop_VPS8 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 102693045
NCBI-ProteinID: XP_006639115
Ensembl: ENSLOCG00000007412
LinkDB
Position
LG17:complement(18971754..18983528)
AA seq 425 aa
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
AIHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDTSHYDSEKGEFGGFGSVSGKIEIEIKI
NHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGY
GLSWNPNLSGNLLSASDDHTICLWDISGGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHES
LFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALW
DLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAED
GPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEESDTPASEL
EGQGS
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggcggacaaagaagtgtatgacgatgcagtggaagagagggtcattaatgaggagtac
aagatctggaagaagaacacacctttcctgtatgaccttgtaatgacacatgccctggag
tggccaagcctgactgtgcagtggctgccagacgtcaataggcctgaagggaaggactat
gccattcatcggctggtgttgggaacccacacttcagatgaacagaaccacctggtcatc
gccagcgtgcagatccccaatgacgacgcccagtttgacacctcccactatgacagcgaa
aaaggagaatttggaggatttggatcagtgagtggaaagatagaaattgaaatcaagatc
aatcacgagggagaagtgaaccgggcaaggtacatgccacagaatccctgcatcatcgcg
acaaagacgccaacttcagatgtcctggttttcgactacaccaaacacccctccaaacca
gaccccagcggcgagtgtaaccccgacctgcggctgcggggtcaccagaaggagggctac
gggctgtcctggaaccccaacctgagcggcaacctgctgagcgcgtcggacgaccacaca
atatgcctttgggacatcagcggaggaccgaaggagggaaagatcgtcgatgccaagacg
atcttcaccggccacaccgcggtggtggaggacgtgtcctggcacctgctccacgagtcc
ttgtttggctccgtggccgacgaccagaagctgatgatctgggacacgcggtctaacaac
acgtccaagcccagtcactccgtggacgcccacaccgcggaagtcaactgcctgtccttc
aacccctacagcgagttcatcctggccaccggctccgctgacaagacggtggccctctgg
gatctccggaacctcaaactgaagcttcactcctttgagtcgcacaaggatgagatattc
caggtgcaatggtcccctcacaacgaaaccattctggcttccagcggcacagacagaagg
cttaacgtctgggatctgagcaaaattggagaggagcagtcagcagaggatgcagaagat
ggacctcctgagcttctgtttatccatggaggacatacagccaagatctctgacttctcc
tggaaccccaatgagccgtgggttatctgctccgtttcggaggacaacatcatgcaagtg
tggcagatggccgagaatatttacaacgacgaggagtccgacacccccgcctccgaactg
gaggggcaggggtcgtaa

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