Lepisosteus oculatus (spotted gar): 102693168
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Entry
102693168 CDS
T07349
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
loc04040
]
102693168 (trpc1)
Ion channels [BR:
loc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
102693168 (trpc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
NapE
Motif
Other DBs
NCBI-GeneID:
102693168
NCBI-ProteinID:
XP_006637772
Ensembl:
ENSLOCG00000007889
UniProt:
W5MMH9
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Position
LG14:complement(15363556..15381238)
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AA seq
797 aa
AA seq
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MHINVLPYSFSVIMAALYQSTDSSSPDKYLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEEKRHGDFNINCVDVLGRNAVTISIENENLDILQLLLDHGCQTTDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKLIHRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNVKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELSA
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSSDEHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGQTASYRRKHTCLKILTVLTVAVLWP
ILSVCYLLVPRSRVGQVIHTPFMKFIIHMASYFTFLLLLNLYSLVYNEGKKNTMGPALEM
IDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLSTFALKVVAHHKFKN
IQNTEDRKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGK
FLGLFLLVLFSFTIGLTQLYGKDQKDPSKSGGKDCEGIFCEQQSNDTFYSFIGTCYALFW
YIFSLAHVALFVTRISYTEELRSFVGALIVGTYNIVVVIVLTKLLVAMLHKSFQQIANHE
DKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTVCYLVTSLSKWICSHTTAGKVKRQNS
LKEWRTLKQKRDENYQKIMCCLVHRYLTSTRQKLQSTDQATVENLNDLRQDLSKFRNEMR
DLLGFRTSKYAMFYPRS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcaatgtattgccgtactcgttttctgtcataatggctgctctgtaccagagc
acggattcttcctctccggataaatatctcgcactcaaggatgtgagagaggtaaaagag
gagacgaccctggacgaaaagctgttcctccttgcttgtgaaaaaggtgactattacatg
gtgaaaaagctcctagaggagaagagacatggcgattttaacataaactgcgtggatgtg
ctggggagaaacgcggtgacgatatccatagagaatgagaacctggacatactgcagctg
cttctggatcatggctgtcagacaacagatgcactgctcgtcgctattgactcagaagtg
gtgggagccgtcgatatcctgctcaatcatagaccacggaggtcctccaaaccgtcgata
gcaaaactgatccaccgtattcagaacccagaatactccacgacaatggatgtcgcccct
gtcattctagcagctcaccgaaacaactatgagatcctcaccatgctgctcaaacaggac
atctcccttccaaggcctcatgcagtcggctgtgagtgcacgctgtgcaatgtcaaaaac
aagaaggacagtctccgccactccaggtttcgtctggatatctatcgttgcctggcaagc
ccttctttgataatgctcactgaggaagacccaatactgagagccttcgagctaagtgct
gacctgaaagagctcagtcttgtggaagtggagttcaggaatgactatgaggagctggcg
aagcagtgtaagatgttcgccaaagacctgctggctcaggcccgcaactctcgagaactg
gaggtgatcctgaaccacacgtccagcgacgagcacgtggacaagcggggcctcctggag
gagcgaatgaacctcagtcgtctcaaactggccatcaagtacaaccagaaagagtttgtg
gcccagtcaaactgtcagcagttcctcaacacagtgtggttcgggcagacggccagctat
cgccgcaaacacacgtgcctgaagatcctgacagtgctgactgtggctgtgctctggccc
atcctgtctgtctgttacctgctggtgcccaggtcccgtgtggggcaggtcatccacacg
cccttcatgaagttcattatccatatggcgtcttacttcaccttcctgctccttctcaac
ctctactccctggtgtacaacgagggcaaaaagaacaccatgggcccagccctggagatg
atcgactacctgctgattttgtggattatcggaatggtgtggtcggatgtgaaaagactg
tggtatgaaggcctggaagattttttggaagagtctcgcaatcagctcagctttgtcatg
aactccctctatttgtcaactttcgccctcaaagtggtagcacaccacaagttcaaaaac
atacaaaacacagaagacaggaagaactgggatgccttccaccctattctggtggcagaa
ggactgtttgcctttgccaatgtcctgagttaccttcgcctcttcttcatgtatacaacc
agctcaatcctagggcccttacagatttcaatgggacagatgctgcaagagtttggcaag
ttcctgggtctgtttcttcttgtgctcttctcctttaccattggtttgacgcagctatat
ggcaaagaccagaaggaccccagcaaaagtggagggaaagactgtgagggcattttctgt
gagcaacagagcaacgacacattttactcgttcatagggacctgctatgccttgttctgg
tatatcttttcactggcgcatgttgcactgtttgtaacgaggatcagctatactgaggag
ttacggtcatttgttggtgccttgattgttggcacatacaacatagtggttgtgattgtc
ctgaccaagcttctcgtggctatgctccacaaaagttttcaacagattgcgaaccacgaa
gacaaggagtggaaatttgccagggccaagttgtggctgagctactttgatgacaagtgt
acactgcctcctcccttcaacatcataccttcccccaagaccgtctgctatcttgtcacc
agtctcagcaaatggatctgctctcacaccacagcgggcaaggtcaaaagacaaaacagc
ctgaaagagtggaggaccctgaaacagaaacgagatgaaaattatcagaagatcatgtgc
tgccttgtgcaccgatacctgacttccaccaggcagaagctgcagagtacagatcaggcc
acagtggagaatctcaatgacctcaggcaggacctttccaaatttcgaaatgaaatgaga
gacctccttggcttccgaacctccaagtatgctatgttttaccccagaagctaa
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