Lepisosteus oculatus (spotted gar): 102693234
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Entry
102693234 CDS
T07349
Name
(RefSeq) FRAS1-related extracellular matrix protein 1-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04512
ECM-receptor interaction
loc04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102693234
04518 Integrin signaling
102693234
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
loc04091
]
102693234
Lectins [BR:
loc04091
]
C-Type lectins
Lecticans
102693234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Calx-beta
Motif
Other DBs
NCBI-GeneID:
102693234
NCBI-ProteinID:
XP_015211471
Ensembl:
ENSLOCG00000009896
UniProt:
W5MUP5
LinkDB
All DBs
Position
LG10:complement(24291454..24348193)
Genome browser
AA seq
2035 aa
AA seq
DB search
MKTVVFLGLAFIVWSVPLTAMAQGLIRRNSGVQVGRGQAVYVTDKELQFNIPKHLDTCKV
EVVLNEPITQRAGRLTPQVFDCHFLPNEVRYIHNGSPLLEEDSVMLRVYRFAESETTMDS
FLLKVRVVEPNSSLIQLGKFPLEVPEFYGVSNPLDSQVATFRHVPDTICTVRLITSETNV
PAQGQLVTEDSAKTSKEDVVSPSGPSQALRRGRQTGLLCPGNKACLPGIKEVRFLKANCE
DFLQMGLKYQHLNPPSPEVDYIPLRVELRDQATRALLETESFWIPVVIRGAMQNQPPRAA
FMSTFILEVDQFILTPMTTAALDAEDDETPQSSLVFNVTKPPAEGYITHLDDHTKPVTSF
SWPDLNEMKIAYQPPNSSHTDRRNYEVEFEAIDGFFTRSPSIMVHFSLRVAETNAPRVSW
NMGLDLLEGQSRPITWENLQIVDNDNINAVYLVAVDGPLHGRLSVRGGKGFMFKVQDIKD
GVVKYHHSDSDTTKDYIVFRISDGRHSLRHKFPINILPKDDTPPFLINNVAFEVEEGGTV
LVEEYMLLASDLDSSDDYILYQLTSLPMAGEVIKKLSPHQPGVPVKSFLQRDLFQGYIYY
RHLGEEVFEDSFEFTLSDSHQPPNLSHKHTVVIHISPVKDQLPVEVSGSVRAITVKETDI
AYITKSHLHFRDLESPDTDLMYLVTKPCFSPTTPGFHDAGRLFYTDSMNKMKKSVPVLKS
FTQHAVNHLKVGYMPPLRDIGTEPVFVQFVFSVSDEQGGSLTGLVFNITVTPVDNQAPEL
FTNRMKVEEGAGSFITEDSLLVTDVDSRDSELRVQLRAGPWHGRVDLQGRPLLEGDFFTL
QDLRSLRLQYLHDDSETLEDRIGFTVTDGFNSANGTLAVQILPVNDEPPALQAGLMSELE
CAEGGRVVITAEYLYATDADSDDSRLTYMLGRTPTHGVVKKGEVTVDKFSQLDVLQGLIS
YVHTGGEIGPNSRSDIITLIVSDGEAGTLDSCCQEDARPPPVPLHGSLPVYDLNITVLPV
NNQPPAIAVGGMFVVEEGSSACLSPEVLNASDLDTPSDDLIFHLEAPPRHGFLENTLPSP
GHEKSNAGLRVVSFSLWHLTSGYINYIQAQHQGVEPNSDHFMVTVSDGVHRSTSVPFYII
INPTNDEVPSLLLRNLTVTEGGMSELSPAVLDAVDLDSPPDTLTFSVLVRPAYGTILNGI
YGLQMSRYKQMGSGMLDQDLLIHSFTLQQLRQGMKIVYMHDDTETLKDSFAVQLTDGKHT
VQGTVHVHIIPVNDEKPRLLKNTGLEVNAAENKVISSMVLEAEDKDTPSDRLYYVLNSCP
KFGQLQLKIAGGWALLQPGMNFTQEDVEMNRLWYLHTTILGAKGHDSFRFYLTDLDNESP
AHSVFISLRDIDKGDIVLLTKPVTLTEGDRVTLTTDVLLATDGTGKVEELLYAVSVPPVR
GHIESINYPGLPIATFSQLDIAAQKVCYVHDNSHEDGQDSFSFVISNGRTSKNGSLAFII
EHKDRIPPTLLLKGGLRVLEGATVTISQDILELRDPDTAVQNLTFSMAQLPQHGRLLLKG
EPLSQASFTQADINHLDVTYQHSGGPAVIDKILLTASDGTNDGFLLYGQLRKEPIAFTIQ
VDLIDKAAPRVVSKETPSTVENLKDGRHGISISSRHLKASDPDSEDQELEFTILRPPFFG
YLENTLTGGYVQGRFTQKDLNQRAIRYIINPAIEVTRDSFEFKVSDPAGNSILPEVMSFQ
WSRVELAATCFRVCENVGTLSVQVVRTGTSGEPSYVGIQAEEGTAKMGRDFTHSSASLIQ
FDPGVNTKSWNIFLRDDGLEESHEKFQILLRAPENAVLGQRNRATVEIMDPRGGSCDPEE
LHPEEEEEEREIKGPPVLFLPGEDDESVSGREKRPTLEGEVPWKHVPPRGDVPDTHRFAD
YSEGEILGQLSTQREHLRITGSSGSTRIYPPEMKMKNRETIWTFHGIIPLRMEETMGPVP
EVPPTHSELQASPIWAWPPPLLPAESGGKEVLQGDSPPHPLKGRARKAEVRAQKR
NT seq
6108 nt
NT seq
+upstream
nt +downstream
nt
atgaagacagttgtcttcttagggctggcattcattgtgtggtctgtccctttgactgca
atggcccagggcctcattcgacggaattcaggggtccaggtgggcagagggcaggcagtg
tatgtgacagacaaggagctgcagttcaacatccccaaacatctggacacctgcaaggtg
gaggttgtgctgaatgagccaataacccagagagctgggaggctgactcctcaggtgttt
gactgccatttcttacccaatgaagtgcggtacatccacaatggctctccgctgctggag
gaggacagcgtcatgttacgagtctacaggtttgctgagtcagagaccaccatggactca
tttctgttgaaggtgagagtggttgaacccaatagcagtctcatccagcttggaaagttt
cctttggaagtacctgaattctacggcgtgtcgaaccccttggacagtcaggtggcaacc
ttccggcacgttccggataccatctgcaccgtgaggttaataacgtctgagaccaatgtt
ccagctcagggacagctcgtcactgaggattcagccaagacaagcaaagaggatgtggta
tcaccttctggtccgagccaggcactcaggagaggtagacagacaggactgctctgccct
ggcaacaaagcctgtctgcctggcatcaaggaagtgcgttttctgaaggccaactgtgaa
gacttcctgcaaatgggattgaagtaccagcacctaaatccaccatctccagaagttgac
tacatccctctccgtgtggagctccgagaccaagccaccagggccctgctggagacagag
agtttttggatcccagtggtgatccggggtgccatgcagaaccagcctccccgagcggcc
ttcatgtccacattcatcctggaggttgaccagttcattctcactcccatgaccaccgcc
gcgctggatgcagaggatgacgaaactccgcagtccagcctggtcttcaatgtcaccaag
cctcctgctgaaggttacatcacccacctcgatgatcacaccaagcccgtgacctccttc
agctggccagacctgaatgagatgaagatcgcctaccagccacccaacagcagtcacaca
gaccggaggaactacgaggttgagtttgaggccattgatggtttcttcacaaggagccct
tcaatcatggttcacttctcgcttcgagtagcagagaccaatgccccacgagtctcctgg
aatatggggctggatttgttagagggtcagtcgaggccaattacctgggagaacttgcaa
attgtggacaatgacaacattaatgctgtctatctggtggctgtggatggacctctacat
gggcgcctcagtgtacgaggaggaaaagggttcatgttcaaggtgcaggacatcaaggat
ggtgtggtgaagtaccaccattcagacagcgacaccaccaaagactatatcgtcttccgc
atctctgatgggcgccacagcctgagacacaagttccccatcaacatcctccccaaggat
gacacgccacccttcctcatcaacaatgtggccttcgaggtggaggagggcggcaccgtg
ctggtagaagagtacatgctgctggcctccgacctcgactctagtgacgactacatcctc
taccaactcaccagcttgcctatggcaggagaggtcatcaagaagctttctccccatcag
ccaggtgtcccagtgaagagttttctacaaagagacctatttcaggggtacatttattac
cgacacctgggagaggaagtttttgaggactcctttgagttcactctctccgacagtcat
cagccccccaatctgtcccacaaacatactgtggtgattcacatctccccagtgaaggac
cagctgcctgtagaagtctccggaagtgtacgcgcaataacagtcaaggaaaccgacatt
gcctacatcaccaagagccacctgcacttcagggaccttgagtctccggacactgacctc
atgtacttggtgaccaagccgtgcttctctcccaccacaccaggcttccatgatgcaggc
agactgttctatacagacagcatgaacaaaatgaagaagtctgttccggtgctgaaatct
ttcactcagcatgcagtgaatcacctgaaggtgggctacatgcctcctctgagggacatt
ggcactgaacctgtcttcgtgcagtttgtcttctctgtgagtgatgagcaggggggctct
ctgacagggctcgtcttcaacatcacagtcacacctgtggacaaccaggcacctgagcta
ttcaccaatcggatgaaggtggaggagggtgcaggcagtttcatcaccgaggacagcctg
ctggtgacggacgtggactctcgggacagtgagctaagggtgcagctgagagcagggccc
tggcacgggcgggtcgatctgcaggggcggcccttgctggagggggatttcttcactctg
caggacctgcgaagcctccgactccagtaccttcatgatgactctgaaacacttgaagat
aggataggtttcactgtgactgatggctttaactctgccaatgggactctggcagtgcag
atcctcccggtgaacgatgagccacctgcactgcaagctggactgatgtcagagctggaa
tgtgcagaagggggccgggtggtgatcacagcagagtacctgtatgccacagatgctgac
agtgatgatagcaggctcacctacatgctgggtcgcacacctacccatggagtggtgaaa
aagggagaagtcacagtggacaagttctcacagttagatgtcctgcaaggcttgatttcc
tatgtgcacacaggtggggagatcggacccaactcgcgttcagacatcatcaccttgatt
gtgtccgatggagaggcagggacactggacagctgctgtcaggaagatgcccgtcctccc
ccagtacctttgcatggctcacttcctgtctatgatctcaacatcactgtcctccccgtt
aacaaccagccccctgcaattgctgtggggggcatgtttgttgtggaagagggatcttcg
gcctgcctttctccagaggtcctgaacgcctccgacctggacactccgtccgatgatctg
atttttcacctggaggctccccctcgacatggcttcctggagaacactctgccctcgcca
ggacatgagaagagtaacgcaggcctccgtgtggtctctttcagcttgtggcacctgacg
tctggctacatcaactacattcaggcccagcatcagggtgtcgaacccaactccgaccac
ttcatggtgactgttagtgacggggtacacaggtccacatccgtccctttctacatcatc
attaaccccaccaacgacgaggtccctagccttcttctcaggaacctcacagtgacagag
ggagggatgagtgagctgagtccggcagtcttggatgctgtggatttagattctccccct
gataccctgaccttctccgtcctcgtccgtccagcctacgggacaatcctgaatggcatt
tacgggctccagatgagccgctataaacagatgggctctggcatgctagaccaggatcta
ctgattcactctttcaccttacagcagctccgccaaggaatgaagatcgtctacatgcac
gatgacacagaaaccctcaaggacagcttcgccgttcagctgacagatggcaaacacaca
gtccaagggacagtgcatgtccacatcataccagtcaacgatgaaaagcccaggctgttg
aagaatacaggtcttgaggtgaacgcagcagagaacaaggtgatttccagcatggttctg
gaagccgaagacaaggacacccccagcgacaggctctactatgtcttgaattcctgcccc
aagtttggtcagctgcaacttaagatagcagggggttgggctttactgcagcctggcatg
aatttcactcaggaagatgtggagatgaaccgcttgtggtacctgcacacaactatcctg
ggggccaaaggtcatgacagcttccgcttctacctgactgacctggacaatgaaagccct
gcccacagtgtcttcatctccctgcgggacattgacaaaggtgacattgttctcctcacc
aaacctgtaactctaactgagggtgacagggtgaccttgacgacagatgttctcctagca
acagatggcaccggcaaagtggaggagctgctgtatgccgtatctgtgccacctgtgcgt
ggtcacatagagtccatcaattatcccggcctgcccattgccacgttcagccagttggac
atagcagctcagaaagtatgctacgtgcacgacaacagccatgaggatggacaggattcc
ttcagctttgtgattagcaatggaaggacctctaagaatggctccctggccttcatcatc
gaacacaaggatcgcattcctccaacgttgcttctcaaaggaggcctccgggtgctggag
ggtgctacggtgaccatctcgcaggacattctggagctccgtgacccagacactgcggta
caaaatctcaccttttccatggcccagcttccccagcatggcaggcttcttctgaaggga
gagcccctttcccaggcttctttcacacaggctgacatcaaccacctggatgtgacctac
cagcacagtgggggaccagcagtgattgacaagatcttgctcacggcttctgatgggacc
aatgatggttttctcctttatgggcagctgagaaaagagcccattgccttcactatacag
gtggatctcattgacaaggcggcgcccagagtggtctccaaggagacccccagcacagtg
gagaatctcaaggacggtcgtcatggaatctctatctcctcccgccacctgaaggcctca
gaccccgacagcgaggaccaggagctggagttcacaatccttcgcccacctttctttgga
tacctggagaacacgctcacaggtggttatgtccaaggacgcttcacccagaaggatctg
aaccagcgtgccattcgctacatcatcaacccagccatcgaagtcaccagagacagcttc
gagttcaaagtcagtgatccagccggaaattccatattacctgaagtcatgtctttccag
tggtctcgggttgagctggccgccacgtgtttccgtgtttgtgagaacgtgggcaccttg
tctgtccaggttgtccgcactggcaccagtggagagccttcatatgttggcattcaggca
gaggaaggtacagccaaaatgggccgggacttcactcacagctcagcctctctgatccag
tttgacccaggagtcaacacaaaatcctggaacatcttcttgcgggacgacgggctggag
gagagtcatgagaagtttcagatcctcttgagggcaccagagaacgcagtcttgggtcaa
aggaacagggccactgtggagataatggatcccagaggagggagctgtgaccctgaggag
ctccacccggaggaggaggaggaggaaagagagattaaaggccctcctgtgctctttctg
cctggggaggacgacgaatccgtttccggaagagagaagagacccacactggagggagag
gtcccttggaagcatgtcccaccccgtggcgacgtccccgacactcatcgctttgcggac
tacagcgagggcgagattctgggccagctctccacgcagagagagcatctgcgcatcact
gggagcagcggcagcacaaggatttatcccccagaaatgaagatgaaaaacagagagaca
atttggacgtttcatggcatcattccccttagaatggaggagaccatgggtccagtccca
gaggtgcctcccacccattctgagctgcaggcaagccctatctgggcctggcctcccccc
ctcctccccgcagagagtggaggaaaggaggttcttcagggagactctcctccacaccct
ctcaaaggccgagccaggaaggcagaggtaagggctcaaaagaggtag
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