Lepisosteus oculatus (spotted gar): 102693377
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Entry
102693377 CDS
T07349
Symbol
rrp1b
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B
KO
K14849
ribosomal RNA-processing protein 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
loc01009
]
102693377 (rrp1b)
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
loc03009
]
102693377 (rrp1b)
Protein phosphatases and associated proteins [BR:
loc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102693377 (rrp1b)
Ribosome biogenesis [BR:
loc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
102693377 (rrp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
102693377
NCBI-ProteinID:
XP_015219092
Ensembl:
ENSLOCG00000004064
UniProt:
W5M922
LinkDB
All DBs
Position
LG17:5019086..5044632
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AA seq
729 aa
AA seq
DB search
MALLLQGPEVQFAQKLASNQKPIRTRAIKKLKKYIGIRSQKQKGGFTSEELLKIWKGLFY
CMWMQDKPLLQEELSAVLSNLIHVFQSMDSKFLFVETFLQTMNREWTGIDRLRMDKFYML
VRMVFRQTFEMLKKRCWDQSLVQRFTELLTVRVLQSNSGCPCGVQFHILDIYMTELAAVG
AQELTAEQNLIFIDPFCKVAAKTKDHLLLQAICNNIFSEVLNQAPFAIEDLMKELQQLEN
NSEDELDLEDKDLMKNSKDSQEDQINGEMAAEEDEGYEDLVGLENGYEPSEGDGDGIGPV
LQFDYKAIAGRLFDLTSRRNTPPLNRKKLYRLVKKFQDLSEGVFPQDGYTEEVSTDEDDD
LFGNRKRLKKKKRRNVEEDPASGEKGQGTKKRPLKASDPKSVEPTAVPAKKKKKEKTRKK
TQRLPDLQECPSTEDKEPETTAIIHPAEKTLKLKKKRKLEEPSVEAESSCSIGQVEAGEI
LMKKKQKKVPSQERVVGEGEGKEQCVLKKQTSLKIKKWRKKQQVNTVALLPENPPANDER
CTKTQAQGKEMVVEAEPEKTSERKLHKRKKLEGQAEASELNGFRETKARKKNRVSGATLK
LKKMKKPLKTGKLEEEVEFLKFGRRSVPSPLFFKKRKGGSSFLSSKGFKTPQDSKKVTFG
LKNNKTAEFKKTDKSLLVSPAGTSRVVFDPQQKPLFGVLKTPDDKPGPRRKLAKNPLQGK
SRPKASDFF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcgttactactgcaaggtcctgaggttcagttcgctcagaaactggcttctaaccag
aaacccattcgaacgagggctattaagaagctgaaaaaatatattggtattcgttcacag
aagcaaaaaggagggtttaccagtgaagaattgctcaaaatctggaagggtctgttctac
tgcatgtggatgcaagacaaacccctgttacaggaagagctgtctgctgttctgtccaat
ctgattcatgtcttccagagtatggacagcaaatttttgtttgtagagacatttctacag
accatgaaccgtgagtggactggcattgacagacttcgaatggacaaattttacatgctt
gtccgaatggttttccgacaaacatttgaaatgctgaagaagagatgctgggaccagagt
ctcgtgcagcggttcaccgaattgcttacagttcgtgttctccagagcaacagtggctgc
ccatgtggggtccaattccacatcctggatatttacatgactgagctggcggctgttgga
gcacaggagctcacagcagaacagaacttgattttcattgatccattttgcaaagtggct
gcaaaaacaaaggaccacctcctgctgcaggccatctgcaacaacatcttcagtgaggtt
cttaaccaggctccctttgccattgaggacctgatgaaggagcttcaacagctagagaat
aactcagaagatgaactggacttggaagacaaagatcttatgaaaaactccaaagattct
caagaggaccagataaatggtgaaatggcagctgaggaagatgagggatatgaagacctc
gttggtttggaaaatggctatgaaccatctgaaggtgatggggatggtataggacctgtg
cttcagtttgattacaaggccattgctggtcgtctctttgacctgacaagccggagaaac
accccccccctaaacaggaagaagttgtacaggctggttaagaagtttcaagacctaagt
gaaggtgtctttccccaggacggttacacagaagaggtatccactgatgaagatgatgat
ttgtttggcaatcgcaagagattgaagaagaagaagaggaggaatgtggaggaagaccca
gcaagtggagagaagggccaaggtacaaaaaaaaggcctctgaaggcttccgaccccaag
tcagtagagccgacagctgtcccagccaagaagaagaaaaaggagaaaacgcgaaagaag
actcagaggttgccagacttgcaagagtgcccttccactgaggacaaagaacctgaaact
acagcaattattcaccctgcagaaaagacactcaagcttaagaaaaagcggaaactagag
gaacccagtgttgaggctgagtcctcctgcagcattgggcaggtggaggctggagaaata
ctaatgaagaagaaacaaaagaaggtcccctctcaggagagggttgtaggtgagggtgag
ggcaaagaacagtgtgtgttgaagaagcagacttctctgaaaattaagaaatggaggaag
aagcagcaggtcaacactgtggctttactacctgaaaacccaccagcaaatgatgaaaga
tgcacaaagacacaggcccaggggaaggaaatggttgtggaagcagagcctgagaaaacc
agtgaacgaaaactgcataagaggaagaagctggaagggcaggctgaggccagtgagctg
aatggtttcagagaaaccaaggccaggaagaagaacagagtaagtggagccactttaaaa
ctgaagaaaatgaaaaagcctctaaaaacaggcaagttggaagaagaggttgaattcctg
aagttcggaagacgttctgtgccttctcccttattcttcaagaagcgtaaaggaggctca
tcatttctgtcaagcaagggtttcaagacaccacaagactctaagaaagtcacctttgga
ctaaagaacaacaagactgcagaattcaaaaagactgataaaagcttgttggtgagtccg
gcaggaacgtcccgagtggtctttgacccccaacagaaacccctgtttggggtcctgaag
actcctgatgacaagcccggacctcggagaaaattggcgaagaaccctctgcagggaaaa
agcagacccaaggcctcagacttcttttag
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