Lepisosteus oculatus (spotted gar): 102693416
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Entry
102693416 CDS
T07349
Symbol
traip
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102693416 (traip)
Enzymes [BR:
loc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102693416 (traip)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102693416 (traip)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_11
zf-RING_5
zf-C3HC4_4
WEMBL
zf-RING_Vps41
zf-RING-like
Gp58
Zn_ribbon_8
RING_XB3-XBAT31
DUF1664
CCDC113_CCDC96_CC
zf-RING_16
zf_RING_Vps8
GAS
Ezh2_MCSS
bZIP_1
FANCL_C
RINGv
4HB_KIF14
NitrOD1
MAD
zf-Nse
SLX1_C
DUF745
Fzo_mitofusin
Laminin_II
MCPsignal
Motif
Other DBs
NCBI-GeneID:
102693416
NCBI-ProteinID:
XP_015202800
Ensembl:
ENSLOCG00000010841
UniProt:
W5MY34
LinkDB
All DBs
Position
LG5:complement(27024529..27036813)
Genome browser
AA seq
458 aa
AA seq
DB search
MPIRAYCTICSDFFDHSKDVAAIHCGHTFHYDCLLQWFQSAPSKTCPQCRKQVSTKHIIN
KLFFDVGGEEDSARVDPESLQNELDKFKALLSVKEKDRKGLQKVIEALRETVGRLNIDLE
CVKKELSEKDMLCAALRKQMKFLENQQSETQSAKEEARRLRTKMKTYESLDLLLQGQRSE
VEAMIRDMGVGQAAVEQLSIFCISLKKEYENLKISNKTSNEMCEKLKREVFVSNNKLQKS
ALQVSRTKEELNAAQEDLKNADKQISSLQKKVEFLQKALSTPSRTNEAISRMVFESPAPL
ELKQPRLHQPEDSQDVDLSITFDIETPEQQEKKSIPVPSKKMRLEPAESPTLRHIGNCST
EKKNSRARDEEEISLAPLLYNSLLFRKKTFGSMLDPQRTKVGTVRTGFDGLGGRTKFIQP
SPLSEIRPLMMKAKRKKVSRPSSSRSASNLLKLDSFLE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgccgattcgagcttattgtacgatctgctcggacttttttgatcactctaaagatgtg
gcagccatccattgtgggcacacgttccactatgattgtcttcttcagtggttccagtct
gcaccatcgaagacctgcccacagtgcagaaagcaggtcagcaccaagcacatcattaac
aagctgttctttgatgtgggaggtgaggaggatagtgcccgtgtggaccctgagagttta
cagaatgaactggacaaatttaaagcccttctaagtgtaaaagagaaggacaggaaagga
cttcagaaagtcatcgaggctttgcgggagacagtgggacgactgaatatagatctggaa
tgtgtcaagaaggagcttagtgagaaggacatgctatgtgctgcactcaggaaacagatg
aagtttttggagaaccaacaaagtgaaacacagtctgcaaaagaggaggcacgccgtctg
aggactaagatgaaaacatacgagagcctggaccttcttctgcagggccagcgctcagag
gtggaggccatgattagagacatgggagttggccaggcagctgttgaacagctctccatc
ttctgcatttccctcaagaaagaatatgaaaacctgaagataagtaacaagacgtcaaat
gagatgtgtgaaaaactcaaaagggaggtttttgtatccaacaacaagttgcagaaatcc
gccctgcaggtgagccgcacaaaggaagaattgaacgctgcccaagaggatctgaagaat
gctgacaagcaaatcagtagtcttcaaaagaaggtggaattcctgcagaaggctctgagc
acgccgtctcgcaccaatgaagcaattagtcgcatggtctttgaaagccctgctcctttg
gaactgaaacagcctcgtctacatcagccagaggacagtcaggatgtggatctcagcata
acctttgacattgaaactcctgaacagcaggaaaagaagagtatcccagtcccatccaag
aagatgaggctagagcctgctgagtcaccaacattaagacatattggcaactgttcaacg
gaaaagaagaattccagagctcgggatgaagaggaaatttccttggcacctttgctttat
aattcgctgcttttcaggaagaaaacctttggaagcatgctggacccccagaggaccaaa
gtgggcactgtaaggactggttttgatggacttggaggaagaactaaatttattcaacct
tcacccctgtcagaaatccgtcctctcatgatgaaagcaaagcggaaaaaagtgagcagg
ccaagcagcagcaggtctgcttccaacctgctgaaactggacagctttctggaatga
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