Lepisosteus oculatus (spotted gar): 102693479
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Entry
102693479 CDS
T07349
Symbol
sptbn4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04517
IgSF CAM signaling
loc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102693479 (sptbn4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
102693479 (sptbn4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
loc04812
]
102693479 (sptbn4)
Cytoskeleton proteins [BR:
loc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102693479 (sptbn4)
Intermediate filaments
Intermediate filament-binding proteins
102693479 (sptbn4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH
PH_9
DUF7854
SLATT_6
Motif
Other DBs
NCBI-GeneID:
102693479
NCBI-ProteinID:
XP_015196534
Ensembl:
ENSLOCG00000014564
UniProt:
W5NBC1
LinkDB
All DBs
Position
LG2:complement(64321187..64387737)
Genome browser
AA seq
2590 aa
AA seq
DB search
MASASTDLDNAELNNNNRPAPSTEQAWDAESTTAKLFECSRIKALADERDAVQKKTFTKW
VNSHLARVSCRIADLYNDLRDGYMLTRLLEVLSGEPLPRPTRGRMRIHCLENVDKALQFL
KEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIETEDNRETRSAKDALLLWC
QMKTAGYPEVNIQNFTTCWRDGLAFNALIHKHRADLIEFNKLTKSNATYNLQQAFNIAEQ
NLGLTKLLDPEDVNTENPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDNAIEAEKI
IERYEDLASELLEWIEKTIGIISNQKFANSLAGVQQQLQAFTTYCTIEKPNKFQEKGNLE
VLLFTIQSKLRANNQKPYVPKEGKLISDINKAWERLEKAEHERGVALRTELIRQEKLELL
AQRFDHKTTMREAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYEERIGVVVE
LATEMEEENYYDIRRIAARKDNILRQWGLLKELVSGRRTRLEKNLVLQKTFQEMVYMIDW
MEDMQVQLLSKDFGKHLLEVDDLLQKHGLQEADIAVQAERVQTLNAAALKFANIEGYQPC
DPQVICNRVNHVSTCLEELKQLAAKRRAELEESRQLWAFFQEVEEEEAWIREKLSILASQ
TYGKDLSSVLGLLNKHKVLAGELMGRRTLLQQTMKKGKQILTQKCFGTGRIQEKIMEVKA
EWKKLEDQARQRLSNLQEALNYFQFNAETDDLLVWLQDTYRLVSSEDFGHDEYSTQSLLK
KHKGVREEIETHRLQVVALRKHMVSLTLQYRELDEVQARMAEVEQLYTEVAEVSVLRQQW
LLDALAVYRMFSEVNACEVWIDEKEQWLNKMEIPERLEDVEVVAHRFESLDQEMNSLMGR
ILDVNQIVQQLLDSGHPSSAEVRGCQDHLNSRWNCIVELVEHKKDNLNSILRIQNYLLEC
NEIKSQIQEKRKAIETTQYTGSDLGGVLALQRKLSTMEGALAVLEPKLIRLQQEAEELAG
THPAQAMEILVQFEEISVEWEELKRTLQGCEDSLTVASRLQQFIQDLDNFLTWLVQTQTA
VASEDLPNTLEEAELLINQHATLKEEIGRYEEDYDRIQSVNKFLALEEAQVPYISLQQWL
QKLDVGWNKLLEMWESRREVLVQSHIFHLFLRDVKQAESVLNNQESALAHVELPATVETV
EGAIKKHKDFITTMELNLQRIKAVIEAGESLISQGNIYSERISERIETIANRSTQNREQA
QEWLHRLNDQWELQRFLQDCHELDDWVAEKMLMARDTSRDEAQKLHKKWLKHQAFMAELA
QNKEWLEKIEKEGQQLIQEKPELGAIVRRKLEEIRECWLELESTTQAKARQLFEANKAEL
LVKSYSDLDQQLSQLEGQLTHLDQGRDLTSVNKQLKRLQSMENHMEEWYKEVGELQVQAA
SIPQQGAVKENVADKQNVVETRIVRLIEPLKERRRILLASKEVHQVSRDLEDEIIWVQER
LPMATSKEHGNSLQAVQQLMKKNQSLQRELHGHRARIEDVLERAGLIASIRSPEADCVRA
SLEHLRMVWDALRMETERRQLTLDAMYQAQQYYFDVTEVEAWLSEQELHMMNEEKGKDEP
STLQLLKKHLVVEQTIEDYAETIGLLSQQCRQLLELGHPDSEQISKRQSQIDRLYVSLKD
LVEERKSRLEQQYWLYQLNREVDELEQWIAEREVVAGSPELGQDFEHVSILQEKFTEFAS
ETGNLGQERVTAVNQMVDELIDYGHADAATIAEWKDGVNEAWADLLELMETRAQMLAASH
QLHKFFADCREVLAQIEDKQKRLPEVRARQGGTANTSTLQRLMHNFEHDIQLLVTQVRQL
QESAAQLRTVYAGEKAEAIAGKEQEVMLAWKELLTSCEECRVQITTTTDKLRFFGMVRDL
VTWMDSIICQIGTKEKPRDVSSVEVMMNYHQSLKSEIEARSRSMMQCVEMGKTLLAARNP
AAEEIKEKLDKLISKQKELSEKWDKHWETLQHMLEVHQFAQEAVVAEAWLTAQEPFISSQ
ELGSSVDEVEQLIRRHEAFRKAAATWEERFSSLRRLTTVEKLKAEQGKLPPTPLLGRKVF
LDPQETSPARSASSSLLRHTIYEQIEPRLERPPEATSSVARRLGSTVASYTPVMNGVKYG
TSLDHRSEPKVAYVRQELKPERLRPKIDNLHDGLRPALEVRPQEKDRETPGPAEVTHEPV
LEITDASQVPHGEPRVSRSDPQVDHYYKRERERKLDRQTSSEQEIQARRDELPLEIRRER
YERRLERQTSSEQEGQAHQERRRDRHRLERQESSEQETTREHSDKRSGGEKRSTLADIVE
QLQEREAAQAQAREREGPPRLPNGLPERATRPDRPRARDRPKPRRRPRPKDPNAPPGEAR
RSRSAPAQSGSAPAVPQPPSHTAQHEGFLFRKHDVESQKKNSNRSWVNLFCVLSKGEIGF
YKDAKNTTTPYNSEPLLSLSSCTCDVTNGYKKKKNVFKLKTKDGSEYLFRAKDEEDLKNW
TTNITKSIDEHEEIARWGQTQPTTSSTDEGTRRDGDKGGKADKADKSEISEKTEKAEKAD
RRSSVSGKKK
NT seq
7773 nt
NT seq
+upstream
nt +downstream
nt
atggccagtgcctccacagacctggataacgcggagctcaacaacaacaaccggcccgcc
cccagcacggagcaggcatgggacgcggagagcaccaccgccaagctgttcgagtgctcg
cggatcaaagcactggcagatgagcgtgacgcagtccagaaaaagactttcaccaaatgg
gtgaactctcacttggcgcgggtgtcctgccgaattgccgacctctacaatgacctgcgg
gacggctacatgctcaccagactcctggaggtgctatcaggagagcccctgccccggccc
acgcgaggacgcatgcggatccactgcctggagaacgtggacaaggccctgcagttcctc
aaggagcagagggtgcacctggagaacgtgggctcccacgacatcgtcgacggcaaccac
cgcctcaccctgggcctcatctggaccatcatccttcgcttccagatccaagtcataaag
attgagactgaggacaatcgagagacacgctcagccaaagatgctctcctgctgtggtgc
cagatgaaaactgcagggtacccagaagtgaacattcaaaacttcactacctgctggaga
gatggtttggctttcaacgcactgatccacaaacacagggcagacctgattgaatttaat
aagctgaccaaatcgaatgccacgtacaatctacagcaagccttcaacattgcagaacag
aacctaggacttacaaaattgctggaccctgaagacgtgaacacagagaaccctgatgag
aagtctatcatcacctatgtggtgtccttttaccactacttctccaaaatgaaagcgctg
gctgtggaaggaaagagaattggaaaggttctggacaatgcgatcgaggcggagaagatt
atcgagcgctatgaagacctagcctcggagctgctggagtggatcgagaagaccattggg
atcattagcaaccagaagtttgccaactccctcgctggagtccagcaacagctgcaggcc
ttcaccacctactgcaccattgagaagcccaacaaattccaggaaaagggtaacctggag
gtcctcctcttcacaatccaaagcaaactaagagccaacaaccagaaaccatatgtgcct
aaagaggggaaattgatctctgacatcaacaaggcttgggagaggctggagaaggcggag
catgagaggggcgtggcactgcggaccgagctgattcgccaggagaagctggagctcctc
gcccagcggttcgaccacaagaccaccatgagggaggcctggctcaacgaaaaccagagg
ctcgtctcgcaggataacttcggctacgacctgcccgcggtggaggcggccatgaagaag
cacgaggccatcgaggcggacatctcgtcgtacgaggagcggatcggcgtggtggtggag
ctggcgaccgagatggaggaggagaactactacgacatccggcgcatcgcggcccgcaag
gacaacatcctgcggcagtggggcctcctgaaggagctggtgagcgggcgcaggacgcgg
ctggagaagaacctcgtcctgcagaagaccttccaggagatggtctacatgatagactgg
atggaagacatgcaggtgcagctcctgtccaaggatttcggcaagcacttgctggaggtg
gacgatctcctccagaaacacgggctgcaggaagcagacatcgctgtccaagctgagaga
gtgcagacgctcaatgcggccgccctcaagttcgccaatattgaaggctaccagccctgc
gatcctcaggtgatctgtaaccgcgtcaatcacgtcagcacctgcctggaggagctcaag
cagctggcagccaagcgccgcgcagagctggaggagtcgcggcagctctgggctttcttc
caggaggtggaggaggaagaggcctggatccgggagaagctgtccatcctggcctcgcag
acctatgggaaggatctgagcagcgtgctggggctccttaacaagcacaaggtcctggcc
ggggagctgatgggtcggcgcaccttactgcagcagaccatgaagaagggcaagcagatc
ctgacccagaagtgcttcgggacagggcggatccaggagaagatcatggaggtcaaagca
gagtggaaaaagctggaagaccaggccaggcagcggctcagcaacctccaggaggccctg
aactacttccagttcaacgccgagacggacgacctgctggtgtggctgcaggacacctac
cgcctggtctccagtgaggacttcggccacgatgagtactcgacccagtccctgctgaag
aagcacaagggcgtgcgggaggagatcgagacgcaccggctgcaggtggtggcgctccgc
aagcacatggtgagcctgaccctgcagtaccgcgagctggacgaggtgcaggcccgcatg
gctgaggtggagcagctctacacggaggtggccgaggtctcggtgctgcgccagcagtgg
ctcctggacgccctggccgtctaccgcatgttcagtgaggtgaacgcctgcgaggtgtgg
attgacgagaaggagcagtggctgaacaagatggagatccccgagaggctggaggatgtg
gaggttgtggcccacaggtttgagagtctggatcaggagatgaacagcctgatgggccgc
attctggacgtcaaccagattgtccagcagctgctggacagtggacaccccagctcggca
gaggtgcggggctgccaggaccacctcaacagcaggtggaactgcatcgtggagctggtg
gagcacaagaaggacaaccttaactctattctccgcatccagaactacctgctggagtgc
aacgagatcaaatcccaaatccaggaaaagaggaaagccattgagaccacccagtacacg
ggaagtgacctggggggggtgctggccttgcagaggaagctctccacaatggagggcgcc
ctggctgtcctggagcccaagctgatccggctgcagcaggaggcggaggagttggcaggc
acccatccagctcaggccatggagatcctggtccagtttgaggagatcagcgtggagtgg
gaggagctgaagaggaccttgcagggctgtgaggactcgttgacggtggccagcaggctc
cagcagttcatccaggacttggacaacttcctgacctggctggtccaaacccaaacagcc
gtggcttccgaagacctgcccaacaccctggaggaggccgagcttctcatcaaccagcac
gccaccctcaaggaggagattggacgctacgaggaggattacgaccgcatccagtccgtc
aacaagttcctggccctggaggaggcccaggtgccttacatctccctgcagcagtggctg
cagaagctggacgttggctggaacaagctcctggagatgtgggaaagccggagggaggtc
cttgtccagtctcacatcttccacctcttcctgcgtgacgtcaagcaagccgagtcagtc
ctgaacaaccaggagtcggcactggcccacgtggagctccccgccacagtggagacggtg
gagggagccatcaagaagcacaaggatttcatcaccaccatggagctgaacctgcaacgg
attaaagccgtgatcgaggctggggagagcctgatcagccagggcaacatctattccgag
cgcatcagcgagaggatcgagaccatcgccaacaggagcacacagaacagggaacaagcc
caggagtggctgcacaggctcaacgaccagtgggagctgcagaggttcctgcaggactgc
catgagctggacgattgggtggctgagaagatgctgatggcccgcgacacatctcgggat
gaggcgcagaagttgcacaagaaatggctgaagcaccaggcgttcatggcagaactggcc
caaaataaagagtggctggagaagattgagaaggagggccagcagctgatccaggagaag
ccggagttgggcgccatcgtacgccggaagctggaggagatcagggagtgctggctggaa
ctggagagcaccacacaggccaaagcccgccaactctttgaagccaacaaggccgagttg
ctggtgaagagctacagcgacttggaccagcagctctcacagctggagggccaactcacc
cacctggatcagggcagggacctgaccagcgtcaacaaacagctgaagaggctccagagc
atggagaaccacatggaggagtggtacaaggaggtgggcgagctgcaggtgcaggccgct
tccatcccccagcagggggcggtgaaggaaaacgtggctgacaagcagaacgtggtggag
acccggatcgtgcgcctcatcgagccgctgaaagagaggaggcgcatcctgctggcctcc
aaggaagtgcatcaggtcagccgggacctggaggatgaaataatttgggttcaggagagg
ctgccaatggccacttccaaagagcatggaaacagccttcaagcagtgcaacagctcatg
aagaaaaaccagagtctgcagcgtgagctccatggccatcgggcacgaatagaggacgtg
ctggagagggcggggctcatcgcttccatccgcagcccggaagccgactgcgtgcgggcc
agcctggagcacctgcggatggtgtgggacgccctgcgcatggagacggagaggcgccag
ctgaccctggacgccatgtaccaggcgcaacagtactactttgacgtaaccgaggtggag
gcctggctgagcgaacaggagctccacatgatgaacgaggagaaaggcaaggatgaaccc
agcaccctccagctgctcaaaaagcaccttgttgtggaacagaccatcgaggattatgcc
gagaccataggcctcctctctcagcagtgtaggcagctgctggaactggggcatccagac
agcgagcagatcagcaaaaggcagtcccagatcgaccggctgtacgtctcgctcaaagac
ctggtggaggagcgcaagtccaggctggagcagcagtactggctgtaccagctgaaccga
gaggtggacgagctggagcagtggatcgccgagcgggaagtggtggccgggtccccggag
cttgggcaggattttgagcacgtctcgatcctgcaggagaagttcacagagtttgcctcg
gagacgggcaacctggggcaggagcgcgtgacggccgtcaaccagatggtggacgagctg
atcgactacggccacgcggacgcggccaccatcgccgagtggaaggacggcgtgaacgag
gcctgggcggacctcctggagctcatggagacgcgggcacagatgctggctgcctcgcac
cagctgcacaagttctttgccgattgccgtgaggtgctggcacagattgaggacaagcag
aagaggcttcctgaggtgcgggcacgacaggggggcactgccaacaccagcaccctccag
agactcatgcacaactttgaacatgacatccagctgctcgtcactcaggtgagacagctg
caggagagcgcggcgcagctccgcacggtatacgctggggagaaggccgaggccatcgcg
gggaaggagcaggaagtgatgctggcctggaaggagctgctgacctcctgcgaggaatgc
cgggtgcagatcaccacaacgacggacaaactgcgcttcttcggcatggtgcgggacttg
gtcacgtggatggatagcatcatctgccagatagggaccaaggagaagccaagggatgtc
tcctccgtggaggtgatgatgaactaccaccagagcctgaagagtgagatcgaagcgcgc
agcaggagcatgatgcagtgcgtggaaatgggcaagacgctcctggcagccaggaatccg
gcggcagaggagatcaaggaaaagttggataagctcatctcaaagcagaaggagctctct
gagaaatgggataagcactgggaaacgttgcagcacatgctggaggtgcaccagtttgcc
caggaggccgtggtggcggaggcctggcttaccgcccaggagcccttcatcagcagccag
gagctgggcagcagcgtggacgaggtggagcagctcatccgccggcacgaggccttccgg
aaggccgccgccacctgggaggagcgcttcagctctctacgcaggctcaccacggtggag
aagctaaaagcagaacagggcaagctgcctccaacgcctctgttgggacgcaaggtgttc
ctagatccccaggaaacctcccctgctcggagcgctagctcatcgctgttgcgtcacacc
atctacgagcagatcgagccaagactcgagcggccaccggaagccacttcctccgtggcc
cggaggctgggctccactgtcgcttcctacacaccggtcatgaatggggtgaagtatggg
accagcctagaccaccgcagcgaacctaaggtagcctacgtccggcaagagttgaagccc
gagagactgcggcccaaaatcgacaacctccatgacgggctgaggcccgcgttggaggtc
cggccgcaggagaaagacagggagacgccaggtccagctgaggtgacccacgagcctgtg
ctggagatcaccgacgcatctcaggtgccacatggggaacctcgggtaagccgctcggac
ccccaggtggaccactactacaaacgggagagggagcgcaagctggaccggcagacctcc
agtgaacaggagatccaggccaggcgagacgagcttccgttggagatccgcagggagcgg
tacgagaggcggctggagaggcaaacttccagcgagcaggagggccaggcgcaccaggag
cgcagacgggacaggcacaggctagagaggcaggaatccagtgagcaggaaacgactcgg
gaacattcggacaagcgttcgggaggggagaaacgatccacactggcggatattgtggag
cagctacaggagagggaggctgctcaggcccaggcccgtgaaagggaaggacctccacgt
ctgcccaatggcctacctgaacgggcaaccaggccggaccggccccgagctcgagaccgc
cccaaaccccgcaggagaccccggcccaaggaccccaacgcacccccaggagaggcccgg
aggtcccgctccgccccagcacagagcggctcggcgcctgccgtcccccagcctccctcc
cacaccgcccagcacgagggcttcctcttccgcaagcacgatgtggaaagccagaagaaa
aactccaacaggtcctgggtgaacctgttctgcgtgttatccaagggggagatcggattc
tataaggacgccaagaacaccacgacaccttacaacagcgagcccttgctcagcctgagc
agctgcacctgcgatgtcaccaacggctacaagaagaagaaaaacgtgttcaaactcaaa
acgaaagatgggagtgaatatctcttccgtgctaaggatgaggaggacctgaaaaactgg
accaccaacatcacaaagagcatcgacgagcacgaggagatcgccagatgggggcagacc
cagcctactacctcttccacggacgaaggaacgaggagggacggagacaaaggaggaaaa
gcggacaaggcagacaagtcggaaatatcagaaaagacggagaaggcggaaaaggcggac
agacgctccagtgtctcggggaagaagaaatga
DBGET
integrated database retrieval system
