KEGG   Lepisosteus oculatus (spotted gar): 102693518
Entry
102693518         CDS       T07349                                 
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
loc  Lepisosteus oculatus (spotted gar)
Pathway
loc03020  RNA polymerase
loc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:loc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    102693518 (polr2d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102693518 (polr2d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:loc03021]
    102693518 (polr2d)
   03400 DNA repair and recombination proteins [BR:loc03400]
    102693518 (polr2d)
Transcription machinery [BR:loc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     102693518 (polr2d)
DNA repair and recombination proteins [BR:loc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      102693518 (polr2d)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 102693518
NCBI-ProteinID: XP_006637929
Ensembl: ENSLOCG00000009106
UniProt: W5MRU3
LinkDB
Position
LG14:18467054..18469946
AA seq 144 aa
MAAGGGTGPPQVGDVEEDASQLLFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELS
EVFMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSL
EGRFEEEELQQILDDIQTKRSFQY
NT seq 435 nt   +upstreamnt  +downstreamnt
atggcggcaggaggaggcactggacccccgcaggtcggagatgtggaggaggacgcctcg
caactgctcttccctaaagagttcgagaacgccgagacgctgctgaactcggaggtgcac
atgctgctggagcaccgcaagcagcagaacgagagcgcggaggacgagcaggagctgtcc
gaggtcttcatgaagacgctcaactacacggcccgcttcagccgcttcaagaacagggag
actatcgccagcgtgcgcagcctgctgttgcagaagaagctccacaagttcgagctggcc
agcctggccaacctgtgccccgaagcagcggaagaagccaaggcccttattccaagtctg
gagggccgatttgaagaggaggaactgcagcagatactggacgacattcagaccaagaga
agcttccagtattga

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