Lepisosteus oculatus (spotted gar): 102693535
Help
Entry
102693535 CDS
T07349
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102693535 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102693535 (lsm1)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102693535 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
102693535 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
102693535
NCBI-ProteinID:
XP_006625385
Ensembl:
ENSLOCG00000015149
UniProt:
W5NDD3
LinkDB
All DBs
Position
LG1:7527210..7530053
Genome browser
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGRKYGDIP
RGIFIVRGENVVLLGEIDLEKESDTVLQQVSIEEILEEQREEQQAKQEAEKLKLQALKDR
GLSIPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaattatatgccgggaacagcgagtctaattgaggatatcgacaaaaaacatcttgtc
cttctacgagacgggcgaacactgattggatttctgcgaagtattgatcagtttgctaat
ttagtcttgcatcaaacagtggaacgtatccatgtgggcagaaagtatggagacatccct
cgaggaatatttatagtgaggggggaaaatgttgttctgcttggagaaatagatctggag
aaggagagtgatacagtcctgcagcaagtttccattgaggagattttggaagagcagagg
gaggaacagcaggctaaacaagaggcagagaaattaaaactacaagcacttaaggaccgt
ggactgtctatcccacgagcagacaccctagatgaatactga
DBGET
integrated database retrieval system
