Lepisosteus oculatus (spotted gar): 102693543
Help
Entry
102693543 CDS
T07349
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
102693543 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102693543 (myo5c)
04131 Membrane trafficking [BR:
loc04131
]
102693543 (myo5c)
03029 Mitochondrial biogenesis [BR:
loc03029
]
102693543 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
loc04812
]
102693543 (myo5c)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
102693543 (myo5c)
mRNA cycle factors
P-body specific factors
102693543 (myo5c)
Membrane trafficking [BR:
loc04131
]
Others
Actin-binding proteins
Myosins
102693543 (myo5c)
Mitochondrial biogenesis [BR:
loc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
102693543 (myo5c)
Cytoskeleton proteins [BR:
loc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
102693543 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
Csm1_N
Motif
Other DBs
NCBI-GeneID:
102693543
NCBI-ProteinID:
XP_006628720
Ensembl:
ENSLOCG00000013362
LinkDB
All DBs
Position
LG3:complement(40293700..40324165)
Genome browser
AA seq
1743 aa
AA seq
DB search
MALSELYTKFNRVWIPDPEDVWKSAEILKDFKPGENVLDLQLEDGTELKYPLELGDKDLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVDSKIIYTYCGIILVAINPYKQLPIYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNSKNQSIIVSGESGAGKTVSARYAMRYF
ATVSKSSSKTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRNQIIGANMR
TYLLEKSRVVFQSENERNYHIFYQLCASADQPEFKNFRLLSADEFRYTSMGGNTYIDGVD
DKADMNETRRTFSLLGLKEDFQMDAFKVLAGILHLGNVQIKAVGDDKSSVSSSDRHLAQF
CELLDVSAESVARWLCSRKIVLVSETVVKPMTRDRAINARDALAKQIYAHLFDCVIDKIN
RALKFPGKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQNWLQKLYNNYVDKNPLFEK
PRMSNESFVIQHFADKVEYKSKGFLEKNRDTMYEELVDVMRASKFHLLANFFQEEEPTSP
FSKSIKIKPARSGLKPTNKQLRTTVGNKFRSSLYLLMETLNATTPHYVRCIKPNEDKLPF
EYDSKRVVQQLRACGVLETIHISAQSYPSRWTYIEFYSRYSILMTQQELALSDKKQTCKI
VLQRLIQDSNQYKFGRTKIFFRAGQVAYLEKLRSDRLRGACVTIQKHLRGWIQRKRFLQM
REAAIVIQQYVRGKRKVRQTVTAATLKRVWAAIIIQKYCRGFLVRRVYQLVQVATVTIQA
YARGWRARTQYKKLVEEQKAVILQKYARAWLARRRFQSIRRLVLNVQLSYRVQQLKKKLE
DQNKENNGLLERLTGLASAHAQDVDKLQKLEADLKKMAAEKKTFEEGMKRSKAEANQLII
QLEAQNNNLLQEKQNLEKKLQDSIKEMKDDADQLKEKFLEELEREERQRKILENSFEIQK
EEYEKRIETMKEEIKCLREEKIMLQEQAQEELQVKSHLQQQVGELAKQLKVIPELKKEIG
NLETEKQHLDRQKKEHMNEARAKISEVTKQLLSGIKEEEFLSRLTTKDLEQINEEGELLF
AYEGLRKATRVIETHAQAQKESYESEIESLRYQIEHFQNENNELQKLFQEGNNVNASIQQ
EVARLASENMVIPQYKQQISELQRQKHDLEDRLKDQAIEMREKMEEISNELRSSLEDESA
QCRLLQLQLEAYEKEKQELLDRIAEKEDENTQLKKQYQTESETKNRLRQEASRLIAENMD
FEEQIDLKDRLIKKLQNQIQGLRSPEKVNPVQAPPVPKEYLGMLEFKQEDEGKIINNLIL
ELKPRGVVVNMIPGLPAHLLFMCIRHADYLSDATKLKSLMNAIISGIKVVIKDHQEDFEM
LSFWLSNSCHMLNCLKQYSGEEELMKHNTPRQNKNCLRNFDLSEHRQIFSDLAIRIYHQF
ISVMENCLMPMIVPGMLEHESLQGISSMKPTGLRKRSTSIYEDMEVYTISSILQQLSYFH
STMCQHGMDAELMKQAVKQLFFLIGAVTLNSIFLRKDMCSCRKGMQIRCNISYLEEWLKE
KSLQNCNAIDTMEPLSQTAWLLQVNKSTDDDAKEICERCSGLSAVQIVKILNSYTPIDDF
EKRVAPSFVRKVQSLLQGREGTSQLMLDTKYRFQVTFPFSPSPQALEMIQIPSSLKLGFL
TRI
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtcggagttgtacaccaagttcaatagagtgtggattccggatccagaagat
gtctggaaatcagcagagattttgaaagatttcaagcctggagaaaatgttttagacctg
cagctggaggatggtacggaattaaaatatcctctcgaattgggcgataaggacctgcct
cctctccgaaaccccgacatcctagtgggggagaatgacctcactgctctcagttacctc
catgagccggccgtcctgcacaacctcaaagtgcgctttgtggactccaaaatcatctac
acctactgcggtattatccttgtggccattaacccatacaaacagttgccaatatatgga
gatgccattatccatgcttactctgggcagaacatgggcgacatggaccctcatatattt
gctgtggcagaggaggcttacaaacagatggccaggaacagtaagaaccagtcgatcatc
gtgagtggggaatcgggagcagggaagacagtgtcggccaggtacgccatgaggtatttc
gccacggttagtaaatccagcagcaagacgcgtgtggaagacaaggtcctggcgtcaaac
cccatcacagaggccattggtaatgcaaagactacaaggaatgacaacagtagccgtttt
gggaagtacactgagatcagttttgataggaggaatcagatcattggagcaaacatgaga
acataccttctggaaaaatccagagtagtttttcagtcagagaacgaaaggaactatcac
atattctatcagctgtgtgcttctgcagaccagccagaattcaagaatttcagactgttg
agtgcagatgagttcaggtacaccagtatgggaggtaacacatacatagatggagttgat
gacaaagctgacatgaatgaaactcggagaactttctcattgcttggattaaaagaggat
tttcagatggatgcattcaaagtgttggcagggattctacacttgggaaatgtgcaaatt
aaagctgtcggtgatgacaagtcatctgtcagttccagcgacaggcacttggcccagttc
tgtgagctgctggacgtcagtgctgagagtgtcgcgcgctggctgtgcagtaggaagatc
gtccttgtctcggagactgtggtcaagcccatgaccagggaccgtgccatcaatgcccgg
gatgccctcgccaagcagatctacgcccacctgtttgactgtgtcatcgacaagatcaac
agggctctgaagttccccggaaagcagcattcgtttattggagtattggatatttatggc
tttgaaacattcgaagtcaacagttttgaacagttttgcattaactatgcaaatgaaaag
ctacagcagcaatttaacctgcatgtgtttaaattggagcaagaagaatatatgaaagag
gacattccctggacattaattgatttctatgacaaccaacctgtcattgacctcattgaa
gctaagatgggcattttggatctgctggatgaggagtgcctgtttccacaggggacagac
cagaattggctacagaagctatataacaactatgtggacaagaaccctctttttgaaaag
ccaaggatgtccaacgaatcatttgtgattcaacactttgctgataaggtggagtacaaa
agtaaaggcttccttgagaagaacagagacacaatgtatgaagaactggttgatgtaatg
agggctagtaagtttcaccttcttgcaaacttcttccaagaagaagaaccaacatctccg
ttctctaaaagcattaagatcaaaccagccaggtcagggttgaaaccaaccaacaagcag
ctccgaacgacagtgggcaataagttccgcagctctctgtatctgttaatggaaactctc
aatgccacaacgcctcactatgtacggtgcataaagcccaatgaagacaagcttccattt
gagtatgactcgaagagagtggtgcaacagctgagagcctgtggagttttagagaccatt
cacataagtgcccaaagctacccatccagatggacatatatagagttttacagtcgctac
agcatactgatgacacagcaagagcttgctctgagtgataagaaacagacatgcaagata
gtgcttcaaaggctcattcaggactccaatcagtacaagtttggtcgcacaaagatcttt
ttccgcgcgggacaggtggcatacctggagaagctgcggtcagaccgactgcgaggggcc
tgtgtcacgattcagaagcacctccgcggctggatacagcgcaagaggttcctacagatg
agggaggctgcaatcgtcatccagcagtatgtgcgcgggaagaggaaagtgaggcaaaca
gtaactgccgctactctgaagcgtgtctgggcagccatcattatccagaagtactgtcga
ggtttcctggtgcgccgggtctaccagctggtacaggttgccacggtgactatccaggcc
tatgctcgaggatggcgcgcacggacacagtataaaaagctggtggaggaacagaaagct
gtcatcctacagaagtacgcccgagcctggctggccagacgccggttccagagtatccgc
cgcctggtgctcaatgtgcagctgtcttaccgagtgcagcagctcaagaagaagctggag
gatcagaataaagaaaacaatggactccttgagaggcttactggtctggccagtgcacat
gcacaagatgttgacaagctgcagaagcttgaagcagatcttaagaagatggctgctgag
aaaaagacttttgaagagggaatgaagagatcaaaggcggaagctaatcagttaattatt
cagctcgaagcccagaacaataaccttcttcaagagaaacaaaacctggagaagaaacta
caggattcgattaaggaaatgaaagatgatgctgatcagcttaaggaaaaattcttggaa
gagcttgaaagagaggagagacaaagaaagatcctggaaaatagctttgagatacaaaag
gaagaatatgaaaaacgcattgagactatgaaggaagagataaagtgcctgcgagaggag
aagatcatgctccaggagcaagctcaggaggagctccaagtcaaaagccacctgcagcag
caggttggagagctcgcaaagcaactcaaggtaataccagagttgaaaaaggagattggt
aaccttgaaacagagaaacaacatctggacagacagaagaaggaacacatgaatgaagca
agagcaaaaatatctgaggtgaccaaacagcttctgtcaggaataaaagaggaagagttt
ctctccaggttaacaaccaaggatcttgagcagataaatgaagaaggcgagttgttgttt
gcctacgagggtctaaggaaagctacaagggtgatagagactcatgcccaggcacagaag
gaaagttatgagagtgaaatcgagtccctcaggtatcagattgaacacttccagaatgag
aacaatgaacttcaaaaactgttccaagaggggaacaatgtgaatgccagcattcagcaa
gaggttgccaggcttgcttctgaaaatatggtaattccccaatacaaacagcagatctcg
gagcttcagcggcaaaagcacgacctcgaggaccgtttgaaagaccaggccatagaaatg
agagaaaaaatggaggagatctcaaatgagttgcgcagtagtttggaagatgaaagtgca
cagtgcaggcttttgcagctccagctagaagcctacgagaaggagaagcaggagcttttg
gacaggatagctgagaaagaggatgagaacacccagctaaagaaacagtaccagacagag
agtgaaaccaaaaacaggctgagacaggaggcatcccgcctgattgcagagaacatggac
tttgaagaacaaattgatctcaaggacagattaataaagaagcttcaaaaccagattcaa
ggacttcggtcaccggagaaagtcaatccagtccaagcaccgcctgttcccaaagaatac
ctcggaatgctagaattcaagcaagaagatgaaggaaaaatcattaacaaccttattcta
gagctgaagcccagaggtgtggtagtgaacatgattccaggtctgccagcacacctcctg
ttcatgtgtataagacatgccgattacctcagtgatgccaccaagctcaagtccttaatg
aatgccatcataagtggcattaaagtcgtcattaaggatcaccaggaggatttcgagatg
ctgtctttttggctgtctaattcttgtcacatgttgaactgtctgaagcagtacagtgga
gaggaggaattaatgaaacacaacactccacgccagaataagaactgcctgagaaatttc
gacctgtctgagcacaggcaaattttcagcgacttggccatccgtatctaccatcagttt
atttcggtcatggagaactgcttaatgccaatgatagtacctggaatgctggaacatgaa
agtcttcagggcatttcgagcatgaaacccacgggtctccgcaagcgttcaaccagcatc
tacgaggacatggaagtctacaccatctcctccatcctccagcagctcagctacttccac
agcaccatgtgtcagcacggcatggacgccgagctcatgaagcaggccgtgaagcagctc
ttcttcctcattggagcggtcaccctgaacagtatattcctccgcaaagacatgtgctcc
tgcaggaagggcatgcaaatcagatgtaacattagttacctggaagaatggcttaaggag
aagagcctgcagaactgcaatgctatagacactatggagcctctttcccagacagcatgg
ttactccaggtcaacaaatcaacagatgatgatgccaaggaaatctgtgagcgatgttct
gggctttctgctgtgcagattgtcaagattctcaactcttacacccctatcgatgatttt
gagaagcgggtggcaccatcatttgtacgcaaagtacagtctttactgcagggtcgtgaa
ggcacatctcagctcatgctggacaccaagtatcgcttccaggtcactttcccgttcagc
ccctccccacaggccctggagatgatccagattcccagcagtcttaaactgggcttttta
accaggatctga
DBGET
integrated database retrieval system
