Lepisosteus oculatus (spotted gar): 102693645
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Entry
102693645 CDS
T07349
Symbol
ddx3x
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X5
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
102693645 (ddx3x)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102693645 (ddx3x)
03041 Spliceosome [BR:
loc03041
]
102693645 (ddx3x)
03036 Chromosome and associated proteins [BR:
loc03036
]
102693645 (ddx3x)
Enzymes [BR:
loc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102693645 (ddx3x)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102693645 (ddx3x)
mRNA cycle factors
Common to processing body (P body) and stress granule
102693645 (ddx3x)
Spliceosome [BR:
loc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102693645 (ddx3x)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102693645 (ddx3x)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-GeneID:
102693645
NCBI-ProteinID:
XP_006638952
Ensembl:
ENSLOCG00000002122
LinkDB
All DBs
Position
LG17:complement(1763859..1782562)
Genome browser
AA seq
707 aa
AA seq
DB search
MSHVAVENAPSLDQQLAGLDLNSAADGQGGGGAGRRYIPPHLRNKEASKNDSPGWDGGRS
NGYVNGYHDGRDNRMNGDRNSFGGRGPSRGDRGGRGGYRGNRSTGSFNQSQPSTGFGYDK
DNSGWNSSKDQRDPYTSFGGRNDRGKSSFFGDRGSGSRGRYDRGGFGSREGGNSRWIEDS
ARDEEDWSKPTSPNDRLEQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVEMGE
IIMGNISLSRYTRPTPVQKHAIPIIKSKRDLMACAQTGSGKTAAFLLPVLSQIYTEGPGE
ALQAVKSNQENGKYGRRKQYPISLILAPTRELALQIYDEARKFSYRSKVRPCVVYGGADI
GQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVE
QDTMPPKGLRHTMMFSATFPKEIQILARDFLDEYIFLAVGRVGSTSENITQKVVWVEESD
KRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQ
FRSGRCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFN
EKNSNITKDLLDILVEAKQEVPSWLESLAYEQQHKSSSRGRSKRFSGGFGARDYRQSSSS
SSSFGSRGSRNTGGHGGSRGFGSGGFGNFYNSDGYGGNYSQVDWWGN
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggccgtcgaaaatgcacccagtctagatcagcagcttgctggcctagac
ttgaactccgcagctgacggacagggcggaggtggcgcaggcagacgttacattccacct
cacttacggaacaaggaggcttccaagaatgattctccaggttgggacggtggacgaagc
aatggctatgtgaacggataccatgatggcagggataaccggatgaatggtgaccgcaac
agctttgggggaagaggaccctcccgtggtgaccgaggtgggcgtggagggtatcgtgga
aacaggagcactggttcctttaaccagtcccagcctagcacaggctttggttatgataaa
gacaatagtggatggaattcctccaaagaccaaagggacccctatactagctttggaggg
cgcaatgatagaggaaagtcgtcattctttggtgaccgtggatctggatcaagagggagg
tatgacagagggggctttggatctcgggaaggtggaaatagccggtggatcgaggattct
gcccgggatgaagaggattggtcaaagccaacatcaccaaatgaccgccttgagcaagaa
ctgttctctggaagcaacactgggataaactttgagaaatatgatgacattcctgttgag
gctaccggttcaaattgtcctccacatattgagagtttcagcgacgttgaaatgggagag
atcatcatgggaaacatatccctgagtcgttacactcgccccactcctgttcagaaacat
gctattccaatcatcaagtcaaagagagacctgatggcttgtgcccagacaggctctggg
aaaacggctgcctttttactacctgtactgagtcagatatacactgaaggtccaggagag
gcattacaagctgttaagagcaaccaggaaaatgggaagtatggacgccgcaagcagtat
ccaatttctttgattttggcccctactagagagctggcattgcagatctatgatgaagcc
agaaagttttcgtatcgctccaaagttcgcccatgtgttgtgtatggcggtgccgacatc
gggcagcagattcgggatctggagcgaggttgtcatctcctggtggctacacctggtcgc
cttgtggatatgatggagagaggaaagattggcctggattactgcaattacttggttttg
gatgaagctgacagaatgcttgacatgggttttgaaccccagatccgacgtattgttgag
caagacaccatgcctccaaaaggactccgtcacacaatgatgttcagcgctaccttccct
aaggaaattcagatccttgctcgcgatttcctggatgagtacattttcttggctgtgggc
cgtgttggatccacctctgagaacattactcagaaggttgtctgggtggaagaaagtgat
aagcggtccttcctgcttgatcttctgaatgcaacaggcaaagattctttgaccctggtg
tttgtggaaactaagaagggtgcagatgcactggaggacttcctgtaccgtgaagggtat
gcctgcaccagcatccatggggaccgctcacagcgagaccgagaggaagcgctgcatcag
tttcgttcaggaagatgccccatcttggttgccactgctgtggctgctcgaggtttggac
atttccaatgtgaaacacgtcatcaactttgacctccctagtgacattgaggaatatgtt
caccgcattggccgtactggccgtgttggaaacctgggcctggcaacctcattcttcaat
gagaagaacagcaacataaccaaggacctccttgatatattggtagaagccaaacaggag
gttccatcctggctggagagcttggcttatgagcaacagcacaagagcagcagccgtggt
cggtctaagaggttttctggaggctttggtgccagagattaccgtcagagtagcagcagc
agcagcagttttggcagccgtggaagccgtaacactggaggtcatggtgggagcagagga
ttcggtagtggtggctttggaaacttctacaacagcgatggttatggtggaaattactcc
caagttgattggtggggcaactaa
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