Lepisosteus oculatus (spotted gar): 102693711
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Entry
102693711 CDS
T07349
Symbol
rai1
Name
(RefSeq) retinoic acid-induced protein 1 isoform X1
KO
K19749
retinoic acid-induced protein 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
loc03000
]
102693711 (rai1)
Transcription factors [BR:
loc03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
102693711 (rai1)
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Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
102693711
NCBI-ProteinID:
XP_015215646
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Position
LG13:16084723..16121995
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AA seq
1842 aa
AA seq
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MQSFRERSGFHGNQQCYQQETHELSRLENYRHHHSQTRQGYEAHSLAAAGTKDCYSQQAY
PAYGSGSAPADKQYKGTKLPGQLLPSGPSAGGYSGHLGSAYPAQYMSEGHLPQKWDDSAH
SHLPQYEQELVGRLEPAAGGGPGGGQYLDQTLLPISQSQCAHPTQPNPPVYTTHPQAKLP
QDTSPSPMTYTQGPMHFPQHSQSLSSSTPSYPAVEKCSQTPHCYKSYAMPPTSQYNRQLG
SSSIKQSGYRAQGSYTYQQAPSRAGYEQQALSGAQDGLSKYQHFSQPPQNYCLSDISVRS
PEQYYQNCSPSSSHSPARSVGRSPSYSSTPSPLMVNPESFQYSQPPITTGAASSSSSSAS
GLREQSLLMPPHSHASPSLNPQTASFAGSLKDRFSEKLLSNPSLWSLNALTSQVENISNN
VQQLLLSEAMVANKKSSKRNQKKTEDFKGQLRALEDGSCPDAQLATPVPEPFGTPQSVHT
ELQEGEYSSSSEDQLERSYYYCGQSRSPAQPTTNSQHALETVSSCSATSPDVLSTKSDDS
AHSLPSAEAGENLATLLKSIGEEKSPKGALTPSPLKPEQDSPDDIQRLKDSLKENFEESA
WLEKTGEEREEPKERLSVDGDGDGDGDGAAEIRAAEPDGWPDHDKYPSLFQKISKALAGK
SYPSDMEEQIYQELQNQYVPDDGGSGEKPSSPSDFNCKTDMVSDVEAEIYKSEFPTDSDA
SGKTVPFSWSNDLVQDQYLTMKEDDSEFPHFDSRSELFEEKLSAAEREKQEAFEEQHSVL
SSRATGAREGEDSSPSSEEAMNNKTWAQESGEIGSPAPEQVNRAAAATETQDAGFPSSER
RSVICDISPSRQPAKAAFSGLNEEATPLSQVREHIDRHDAVVLEPDSPQLPGKSMLHSAP
SWVDTPPSPKKGDEEIDPRIDGPTGVTPSTKAESPPPSAHLTPFHRKHAEDKSSQSGRIM
HTSVRIRRLSSGVGEALPGTPQEMSMPSSKSITVTDQTGVMHKDLSSQTTKLFPESFPSR
MCTRSFTALAAPKACIHLKRQVATKLAKGVAAKETLPKIKWKKQKGPKPALIGHLKSKKT
LSESSSQDENHDSSLPPAAPGKDPRAMVLRSRKPAQEKPLKHKGKDKRTPCALPRKLKDT
KKHKASFQKEAARGSPKQALAGSQRSVVYRIKPEEKASPPLKRKASCLSPVPVKKRRGGK
AGRGDGFQAPLKNKPGGVKAPSKRLRQGEHLLTKDTPLAAVSGGHCLPPQYPPKTKYLPP
RKGRGLKYEALVQKITSPGAKKHSSSPPGEPCAAQAAENRGPAEPAAGAPGEEGGAPNAT
GAPHVGFARAPTSKRKRVAAGEGVEPPEGPLESGGLVVPTPRLAKQRAIKNNHEMHLKQR
RKKRKAPAFPPPDSAPAGQQALPPAPALPPSAGQLPGSPTGPSDTGAAKRGARRSAQTRQ
RQGRASDKPKAVKQTGPNRRNRKHLSAVKARRGGHRRPSAPVVEEKQPEIRLKYVTYKPQ
KNENKPFFSPYVHIDSSKEFAALCTIVNRPEEEFLLLNARKKSSAKMKSPAPVAKAIPNS
SVMLQGPLVNKNLIDRCLTCCLCGKPANYRELGDLCGPYYPEDSIPRKTLSLKCKLEPRE
DRARLSCGAARSPPSRPEGDKGPSGSGSGAPGRPRRAERAAGEPGALRPKFRERYRKLQQ
FQGYDRRAAEGEAGPGKPKEALQRLELEAEAKEHWVHEACAVWTNGVFLVSGKLYGLQEA
ALGAAASRCLKCQDLGASVGCCSKGCPQKFHYVCAKEMGCSLQEENFSLKCPKHKVSDRV
MIEGQKVKYLWMNPVFLRRTVPEIILPDNTATEGSFCQRCRL
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccttcagagaacggagtggtttccatggcaaccagcagtgctaccagcaggag
acacatgaattatcacgccttgagaattacagacatcatcacagccagaccagacagggc
tacgaggcacattcgctcgcggccgcggggacgaaagactgctacagccagcaagcctac
ccggcctacggcagcggctcggcccccgcggacaagcaatacaagggaaccaaactgccg
ggccagctcctgcccagcgggccctccgccggcggctacagtggccacctgggctcagcg
tacccggcccagtacatgagcgaggggcacctgccgcagaagtgggacgactccgcgcac
tcgcacctgccccagtacgagcaggagctggtgggccggctggagcccgcagccggcggc
gggcccggcgggggccagtacctcgaccagaccctgctccccatttcccagagccagtgc
gcccaccccacccagcccaacccccccgtctacaccacccatccccaagcgaaactgccc
caggacacctccccgtcccccatgacctacacccaggggcccatgcacttcccccagcac
tcccagtctctctcctcctcaacgccctcctacccggccgtggagaagtgcagccagacg
ccccactgctacaagagttacgccatgccgccaacttcccagtacaaccggcagctgggg
agcagcagcatcaagcagagtggctacagagcccagggcagctacacgtaccagcaggct
ccctccagggccggctacgagcagcaggccctgtccggcgcccaggacgggctttcaaaa
taccaacatttcagccagcccccacagaactactgcctctccgacatctcggtcaggtcc
cccgagcagtactaccagaactgcagccccagttcgagccactccccggcccggtctgtc
gggaggtctccttcctacagctccaccccttcgcccctgatggtcaatcccgagtccttc
cagtacagccagccccccatcacgacgggggccgcctcctcctcctcctcctccgccagc
gggctgagagagcagagcttgctgatgcccccccactctcacgcctcccccagcctcaac
cctcagaccgccagcttcgcgggctccctcaaggaccgcttttccgagaagctcctgtcc
aaccccagcctgtggagcctcaacgccctgacgtctcaggtggagaacatttccaacaac
gtccagcagctcctgctctcggaggccatggtggccaacaagaagagcagcaaacgcaac
cagaagaagacggaggacttcaaggggcagctgagagccctggaggacgggtcgtgccca
gatgcccagctggccacgcccgtgcccgagccctttggcacgccgcagtccgtccacacg
gagctgcaggagggcgaatactccagcagctcggaagaccagttagagaggagctactac
tactgtggccaaagcaggagcccagcccagcccactacaaactcccagcacgcgctggag
accgtgtcctcctgctccgcgacgtcccccgacgtcttgtccaccaagtccgacgactcg
gcccacagcctgccgagcgcggaggccggggagaacctcgccaccttgctcaagagcata
ggagaggagaagtcccccaaaggggccctcacccccagtcccctgaagccggagcaggac
tcccccgatgacatccagcgcctgaaggactccctgaaggagaacttcgaagagtcggcc
tggctggagaagacgggcgaggagagggaggagccgaaagagcggctgtctgtggacgga
gatggagacggagacggagacggagccgccgagatccgcgcggcggagccagacggctgg
cccgaccatgacaaatacccgtccctgtttcagaagatcagcaaggcgctggcaggcaag
agctacccaagcgacatggaggagcagatatatcaggaactgcagaaccaatatgttccg
gatgacggaggcagtggggagaagccatcaagcccttcagacttcaactgcaagactgac
atggtttctgatgtggaggctgagatatataaatcagagtttcccaccgattcagacgcc
tcagggaaaaccgttccattcagctggagcaatgaccttgtacaagatcaatatttaacc
atgaaagaggacgactcagagtttccgcattttgattccaggagcgaattgtttgaggag
aagctttcagcagccgagagagagaagcaggaagcttttgaagagcagcactctgtcctt
tccagccgagccactggagcgagagagggagaggatagctcgccgtcctctgaggaggcc
atgaataataaaacatgggcccaggagtctggggaaatcggcagcccagccccggagcaa
gtaaacagggctgctgccgccacagagacacaagacgcaggctttccgagctccgaaagg
aggtcagtcatttgcgatatctcaccttccaggcagcctgctaaggcagctttctcgggg
cttaatgaagaagcaacacctctgtcccaagtgagggagcatatcgatcgccacgacgcc
gtggtgctggagcccgactctccacagctgccaggcaagtcgatgctgcactctgccccc
tcctgggtcgacaccccgccctcgccgaagaagggtgacgaggagatagacccccgcatc
gacggcccgactggagtgacaccttccaccaaggctgagtcccccccgccctcggcgcat
ctcacgcccttccacaggaagcacgcagaggacaagagcagccagtcgggaagaataatg
cacacaagcgtgaggatccgcaggctttccagcggggttggagaggcgctgccgggcacc
cctcaagagatgagcatgccctcaagcaagagcatcaccgtgacagatcagacaggcgtg
atgcacaaggacctgtccagccagacaacgaagctttttcccgagagcttcccttccagg
atgtgcaccaggtccttcacggccctggctgcccccaaagcttgcatccacctgaaaagg
caggtggccacaaagctcgcaaagggagtagccgcaaaggagacgctccccaagatcaag
tggaagaagcagaaaggccccaagccggctctcataggtcacctcaagagcaagaagact
ctgagtgagagcagctcacaggacgaaaaccacgactccagcttgcctccggctgcgcct
ggtaaagacccgagagccatggtgctgaggtcaaggaagccagcgcaggagaagcccctg
aagcacaagggaaaggacaagaggacgccttgcgctctgcccaggaagctgaaggacacg
aagaagcacaaggcctccttccagaaagaggcggcgcgcgggagccccaagcaggccctg
gcggggtcccagcgcagcgtggtctacaggatcaagccggaagagaaggccagcccccct
ctgaagaggaaggcgagctgcctctctcctgtccccgtgaaaaagcggagaggtgggaag
gcgggcaggggggacggcttccaggccccgttaaagaacaagccggggggcgtgaaggct
cccagcaagaggctgcggcagggagagcacctcctcaccaaagacacccccctggcggcc
gtgagtggtggccactgcctgccccctcagtacccccccaaaacaaagtacctgcccccc
cgcaagggcaggggcctgaagtatgaggcgctggtccaaaagatcacgtctccgggcgcg
aagaaacactcctcgagccccccaggggagccctgcgcggcgcaggctgcggagaacagg
ggccccgcggagccagcagcgggggccccgggagaggaggggggcgcgcccaacgccacg
ggggcgccgcacgtgggcttcgccagagcccccacttccaagaggaagagagtggcggcg
ggggagggcgtcgagccgcccgaggggccgctggagtccgggggcctcgtggtccccacg
cccaggctggccaagcagagggcgatcaagaacaaccacgaaatgcatctgaagcagagg
aggaaaaagaggaaagctcctgcctttccccccccagactctgcccccgcgggccagcag
gctctgcccccggcccctgccctgcccccctccgcggggcaactcccaggcagccccacg
ggcccctccgacaccggcgcggcgaaaaggggcgcgcgcaggtcggcgcagacgagacag
agacaggggagagcttcagacaagcccaaagctgtcaagcagacggggcccaacaggcga
aaccgaaaacacctgagcgcggtcaaggccaggcggggcggccacaggaggcccagcgct
cccgtcgtggaggagaaacagccggagatccgtttaaaatacgtcacgtacaagccgcag
aagaacgaaaacaaacccttcttcagcccgtacgtgcacatcgacagctccaaagagttt
gccgctctgtgtacgattgttaacaggcctgaggaagagtttctgctcctgaatgccaga
aaaaagagctcggccaagatgaaaagccctgccccagttgctaaggcgatccccaactcc
tcggtcatgctgcaggggccgctggtcaacaaaaacctcatcgacaggtgtctaacctgc
tgcctgtgcggaaagccagcaaattacagggagctgggggacttgtgtggcccctactat
cctgaagacagcataccgcgcaagacgctgtctctcaagtgcaagctggagcccagggag
gaccgagccaggctgagctgcggcgctgcgcggagccccccctcccggccggagggcgac
aagggccccagcggcagcggcagcggcgccccggggcggccgaggagggcggagcgggcg
gcgggcgagcccggcgcgctgcgccccaaattcagggagcgctaccggaagctgcagcag
ttccagggctacgaccggagagccgcggagggggaggcgggcccgggcaagccgaaggag
gctctgcagaggctggagctggaggccgaggccaaggagcactgggtgcacgaggcctgc
gccgtctggaccaacggggtcttcctcgtctccgggaagctgtacggcctgcaggaagcc
gcgctcggcgccgccgcctcgcgctgcctgaagtgccaggatcttggtgcgtcagtgggc
tgctgcagtaaaggatgccctcagaaattccactatgtctgtgccaaagagatgggttgc
tctttacaagaagaaaacttttcattgaaatgtccaaagcataaggtaagtgaccgtgtt
atgatagaaggacagaaggtaaagtatttgtggatgaatccagtatttttaagaagaacg
gtgcctgagattattcttcctgacaacactgcaacggaaggctcattctgccagcggtgc
cggctctga
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