Lepisosteus oculatus (spotted gar): 102693756
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Entry
102693756 CDS
T07349
Symbol
ppfibp1
Name
(RefSeq) liprin-beta-1
KO
K27096
liprin-beta
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102693756 (ppfibp1)
Membrane trafficking [BR:
loc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
102693756 (ppfibp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_PNT
DUF16
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
102693756
NCBI-ProteinID:
XP_015207379
Ensembl:
ENSLOCG00000015237
LinkDB
All DBs
Position
LG8:3587629..3645793
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AA seq
1045 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGSLRALQLIEDLRGLLE
LMETEEKEGLRCQIPDSTAELIVEWLQGHMTNGHISVSGDVYQERLSRLESDKESLVLQV
SVLTDQVEAQGEKIRDLDLCLEEHREKLNATEEMLQQELLSRTALETQKLDLMAEVSNLK
LKLTALEKDRLDFDERFRDSESLHNLISELRDQMETLEVELALFQEKRLQYGDQEGLIQE
INDLRFRVTEMENERLQYEKKLKSTKSLMAKLSSLKIKVGQMQYEKQRMEHKFQTHKDEL
LMLQEQLEQKEVELKRLREEDLVKTPGEGPEKEEKDENFKKKLKEKHFEVQKMKRAVESL
MAANEEKDRKIEELRQSLNRYKKVQDMVISAQVKKDKLKEGDSEESQSDSSVSVSTAISV
AVESDKSPSPVAHEEPGARQEVAVLPVPGELSGKLHTSVLQVSISASTSTPKSSCVPEQN
TALEQKEQDSRVVTPDVSQIQETSICDSPVSPDITKSSSLDNLKSSDADKKNVLPSVHQT
PQEMAENFLLLIKNKAFEEISKFGSLPPKSPRQAGSVDDSFGTRKARASFGRGFFKIKGG
KRTASAPNLGGNSACFQGSFDFVLDVKRDSDLRSQSTTFNPDDMSEPEFKRGGVRATAGP
RLGWSRDLQNASSELDAPFAKWTKEQVCNWLQEQGLGLHVGSAKQWILSGQTLLQASQQD
LERELGIKHPLHRKKLQLALQALGSEEDDNKGKLDYNWVTRWLDDIGLPQYKTQFDEGRV
DGRMLHYMTVDDLLSLKVGSVLHHLSIKRAIQVLRINNYEPNCLRRRPSDENNVTPAEVS
QWTNHRVMEWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETMALLLNIPPNKTLLRRH
LATHFNLLIGSEAQQQKQEAMESPDYVVLTATAKVKPRKLAFGSFGSLRRKRPEDSEEYV
CPMDVAMPRGISFQKGYKRGMDMRLYDDDLDRLEQMEDSEGTVRQIGAFSEGINNLTSML
KEDEFFKELSTCSPSASITDEDSNV
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctgatgccagtgacatgttggctgcagccttggagcagatggatggaatcata
gcaggctccaaggctctcgagtactccaatggcatcttcgactgccagtcccccacctct
cccttcatgggcagcctgcgggcgctgcagctgatcgaggacctgcggggcctgctggag
ctcatggagacggaagagaaggaagggctgcgctgccagatcccagactccaccgccgag
ctcattgtggagtggctccagggtcacatgaccaatgggcacatctccgtgagtggtgat
gtttatcaggaaaggctttctcgtctcgagagtgacaaggaatccctcgtgttgcaagta
agcgtgttgactgaccaggtggaagcgcagggggagaagatccgggatcttgacttgtgt
ctggaggaacaccgagagaagctcaatgctactgaggaaatgctgcaacaggaacttcta
agtaggacggccctggagactcagaaactggatctgatggctgaggtttccaaccttaag
ctgaagctgactgctttggaaaaagaccgcctggatttcgatgagagattcagggacagt
gagtcactgcataacttaatctccgagctccgagaccagatggagacgctggaggtggaa
ctagcacttttccaagaaaagaggttacagtatggggatcaagaggggttgatccaggag
attaatgacctgaggtttagagtgacagagatggaaaatgagaggcttcagtatgaaaag
aagctgaaatcaaccaagtctctaatggccaaactctctagcctgaaaatcaaggttggt
cagatgcagtatgaaaagcagaggatggagcacaaattccagacacacaaggacgagctg
ctgatgctgcaggagcagctggaacagaaggaagtggaactgaagcggctcagggaggag
gatctcgtcaagactccgggggaggggccagaaaaggaggagaaagatgaaaattttaaa
aagaagctcaaagagaaacactttgaggtgcaaaaaatgaaaagggcagtggagtcattg
atggcagctaacgaagagaaggatcgtaaaattgaagaactccgacaatcactcaaccgg
tataaaaaggttcaagacatggtcatttcagcccaggttaaaaaagataagctgaaagag
ggagacagtgaagagagtcagagcgatagctctgtttctgtgtccactgccatttcagtc
gctgtcgaatcggacaaatcgccttctcctgttgcacatgaagagccaggagccaggcaa
gaggtggcagtgctgcccgtgcctggagagctctccggtaaactacatacgagtgtcctc
caagtgtccatctctgcatcaacatcaaccccaaagtcatcttgcgtgcctgagcagaat
acagccctggagcagaaggaacaggacagcagagtggtgactcctgacgtgtcgcaaata
caggagacttcaatatgcgacagccctgtatccccagacatcacaaaatcaagcagtctg
gacaatctaaaaagcagtgatgctgacaagaagaatgtcctcccgtcagtccatcagacg
ccacaagagatggcggagaactttttacttctcatcaagaataaggccttcgaggagata
agcaagttcggcagcctgccgcccaagtctccccgacaggccggctcagtggacgacagc
ttcgggacgcggaaggccagggcgtcgttcgggcggggcttcttcaagatcaagggaggc
aagaggacggcgagcgctcctaacctaggtgggaactctgcgtgctttcagggttccttt
gattttgtgctggacgttaaacgggactcggatctaaggagccagtccaccacatttaac
cctgatgacatgtcggagccggagtttaagagaggcggggtgagggccacggcggggccc
cggctgggctggtctcgggacctgcagaatgcgagcagtgagctcgacgcgcccttcgcc
aagtggacgaaggagcaggtgtgtaactggctgcaggagcagggcctgggcttgcacgtc
ggctcggccaagcagtggatcctgtcggggcagactctgctgcaggcctctcagcaggac
ctggagagggagctgggaattaagcaccctctccacaggaagaagttgcagctggccttg
caggctctgggctccgaggaagacgacaacaaaggaaaactcgactacaactgggtcacc
agatggctggatgacattgggctgccacagtacaagacccagtttgatgaaggcagggtt
gatggaagaatgcttcattatatgactgttgatgatctgctgtcactgaaagttggaagt
gttcttcatcatctcagtatcaaaagagccattcaggtcctccgtattaacaactacgaa
cccaactgtctgcgcagaaggccttcagatgagaacaacgtcacccctgccgaggtgtcg
cagtggacgaatcacagggtgatggagtggctgcgctccgtggacctggccgagtatgca
cccaacctcagaggaagtggtgtgcacgggggcttaatggtgctggagccccggttcaac
gtggaaacgatggcgctgctgctgaatatccccccaaacaagactctgctgagacggcac
ttggccacgcacttcaacttgctcataggctccgaggcgcagcagcagaagcaggaggcg
atggagtcgcccgactacgtcgttctcaccgccaccgcgaaagttaagcccaggaagctg
gcgttcgggagtttcgggagcctgcggagaaagaggccggaggattcggaggagtacgtg
tgccccatggatgtggcgatgcccagaggaatcagtttccagaaaggatacaaacgaggc
atggacatgagactgtatgatgacgaccttgaccgcctggagcagatggaggactctgaa
ggaaccgtaaggcaaattggagcattttctgagggcatcaacaacttgactagcatgctg
aaagaagatgaattcttcaaagaactttccacctgctctccaagtgccagcattacagat
gaagactccaatgtgtga
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integrated database retrieval system
