Lepisosteus oculatus (spotted gar): 102693845
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Entry
102693845 CDS
T07349
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04810
Regulation of actin cytoskeleton
loc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102693845 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102693845 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102693845 (cyfip1)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102693845 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
102693845 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
Cypovirus_WIV_4
Motif
Other DBs
NCBI-GeneID:
102693845
NCBI-ProteinID:
XP_015219559
Ensembl:
ENSLOCG00000008180
LinkDB
All DBs
Position
LG17:20716902..20781237
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AA seq
1221 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLMYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYPFGQRNAIDRFC
GEVRRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCSVKNDHSAYKRAAQFLRK
MSEPSSIQESQNLSMFLANHNKITQLADIVNLCVDYYENKMYLTPSEKHMLLKVMGFGLY
LMDGSMSNIYKLDAKKRINLTKIDKFFKQLQVVPLFGDMQIELSRYIKNSAHFEENKSRW
SCTSIGSSPQYNICEQMIQIREDHMRFISELARYSNSEVVTGSGRQEAQKTDAEYRKLFD
LALQGLQLLSQWSAHVMEVYSWKLVHPTDKYSNKECPDNAEEYERATRYNYTSEEKFALV
EVMAMIKGLQVLMGRMESVFNHAIRHTIYSALQDFAQVNLREPLRQAIKKKKNVIQSVLQ
AIRKTVCDWETGREPPNDPALRGEKDPKGGFDIKVPRRAVGPSSTQLYMVRTMLESLIAD
KSGFKKTLRSSLEGPTILDIEKFHRESFFYTHLINFSETLQQCCDLSQLWFREFFLELTM
GRRIQFPIEMSMPWILTDHILETKEASMMEYVLYPLDLYNDSAHYALTKFKKQFLYDEIE
AEVNLCFDQFVYKLADQIFAYYKILAGSLLLDKRLRAECKNQGANIPWPASNRYETLLKQ
KHVQLLGRSIDLNRLITQRVSAAMYKSLELAISRFESEDLTSIMELDGLLEINRMTHKLL
SKFLTLDSLDAMFREANHNVSAPYGRITLHVFWELNYDFLPNYCYNGSTNRYVRTVLPFS
QEFQRDKPPNAQPQYLYGSKALNLAYSSIFGFYRNFVGPPHFKAICRLLGYQGIAVVMEE
LLKVVKSLLQGTILQYVKTLMEVMPKICRLPRHEYGSPGILEFFHHQLKDIVEYAELKTV
CFQNLREVGNAVLFCLLIEQSLSQEEVCDLLHAAPFQNILPRVHVKEGERLDAKMKRLET
KYTALHLVPLIERLGTPQQIAIAREGDLLTKERLCCGLSMFEVILTRVRSFLDDLIWRGP
LPSNGVMHVDECVEFHRLWSAMQFVYCIPVGAHEFTVEQCFGDGLHWAGCMIITLLGQQR
RFDILDFCYHLLKVQKHDGKDEVIKSVPLKKMVDRIRKFQVLNDEIFAILNKYLKSGDGE
NTPVEHVRCFQPPIHQSLASN
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccactgtgaccctggaggacgccctgtccaatgtggacctgctggaggagctg
cccctcccggaccagcagccctgcatcgagccaccgccctcctccctcatgtaccagccg
aacttcaataccaactttgaagacaggaatgcctttgtcactggcattgcgagatacatt
gagcaagcaacggtccactccagcatgaatgagatgctggaggagggtcaggagtacgca
gtgatgctgtacacctggaggagctgctccagagccattccccaggtgaaatgtaatgag
cagccgaacagggtggagatttatcctttcgggcagcgcaacgccatcgaccgtttctgc
ggcgaggtgcggcggctgtgccacgccgagcggaggaaggactttgtgtcggaggcctac
ctgctgacgctggggaagttcatcaacatgtttgcggtgctggacgagctgaagaacatg
aagtgcagcgtcaagaacgaccactccgcgtacaaaagagcagcccagttccttcggaaa
atgtctgaaccttcatccattcaagagtctcaaaatctgtcaatgtttttggctaaccac
aataaaataacccagttggctgacattgtgaatctctgtgtggattattacgagaacaag
atgtacctcactcccagtgagaagcacatgctgctcaaagtgatggggtttggattgtac
ctaatggatggttcaatgagcaatatttacaaactggatgccaagaaaagaataaatctg
accaaaattgataaatttttcaagcaacttcaggttgttccactgtttggcgacatgcag
attgagctgtcgaggtacatcaagaacagcgctcactttgaggagaacaagtctaggtgg
tcctgtacctccattggcagcagcccacagtacaacatctgcgagcagatgatccagatc
cgagaggaccacatgcgcttcatctcggagctggcccgctacagcaacagtgaggtggtg
acgggctcgggccggcaggaggctcagaagacggacgcggagtaccggaagctgtttgac
ctggcgctgcaggggctgcagcttctgtcccagtggagtgctcatgtcatggaagtgtac
tcgtggaagctggtgcaccccactgacaaatactccaacaaggagtgcccagataatgca
gaggagtatgaaagagcaacaagatataattacaccagcgaggagaagtttgcccttgtg
gaggttatggccatgatcaagggcctgcaggtcctgatggggagaatggagagcgtcttc
aaccatgccatccgccacaccatctactccgccctgcaggactttgcccaggtcaacctc
agggagcccctgcgccaggccatcaagaagaagaagaacgttatccagagtgtccttcaa
gctataaggaagactgtctgcgactgggagactggtcgggaacctcccaatgatccggcc
ctccgtggagagaaggaccccaagggtggcttcgatatcaaagtgccccgtcgggctgtg
ggaccatccagtacacagctgtacatggtgagaaccatgcttgagtcgctcatcgctgac
aaaagcggcttcaagaaaaccctgcggagcagtcttgagggacccaccattttggatata
gaaaaattccaccgggagtccttcttctacacacatttgataaatttcagtgagacgctg
cagcagtgctgtgacctgtcccagctgtggttccgggagttcttcctggagctcacaatg
ggccgcaggatccagttcccgatcgagatgtccatgccctggattctcacagaccacatc
ctggagaccaaggaggcgtccatgatggagtatgttctttatcccctggacctgtacaat
gacagtgcccactatgccctgaccaagttcaagaagcaattcctgtacgatgagattgag
gctgaggtaaacctgtgttttgaccaatttgtttataagcttgcggaccagatatttgcc
tactacaagattctggctggaagcctgctcttagacaaacgtctgcgagcagagtgcaag
aatcaaggagctaacatcccctggccagcttccaacagatacgagaccttgctgaagcag
aagcatgttcagctcctgggcagatccatagacctgaaccgcctgatcactcagcgcgtc
tctgccgccatgtacaagtcccttgagctggccatcagccgcttcgagagtgaggatctc
acctctatcatggagctggatgggctactggagatcaatcggatgacacacaagttgctc
agtaagttcctgactctggacagcctggatgccatgttcagagaggccaaccacaacgtg
tctgcgccttatggcagaatcacccttcatgtcttttgggagctcaactatgatttcctt
cccaactactgctacaatggatccaccaacaggtatgtgcgcactgttctgcccttctcc
caggagttccagagggacaaaccacccaatgcgcagccacagtacttgtatggctcaaag
gcgctgaatctggcatacagcagtatctttggattctacaggaactttgtggggcctcct
catttcaaggctatctgcaggctcctgggttaccaaggtattgccgtggtgatggaggag
ctgctgaaggtggtcaagagtctgctacagggaaccatcctgcagtacgtgaagaccctg
atggaagtcatgcctaagatctgccgcctccctcgccacgagtatggctccccaggcatc
ctggagttcttccatcaccagctgaaagacatagtggagtatgctgagctgaagactgtg
tgtttccagaacctccgagaagtgggcaacgctgtcctcttctgtctcctcatcgaacag
agcctgtctcaggaagaagtgtgtgacctgctgcatgctgctccgttccaaaacatcctt
cccagggtccatgtgaaagagggtgaacgcctggatgccaagatgaaacgtctggaaaca
aaatacacagcattgcatcttgttccactgatagaacgcttgggaaccccacagcaaatc
gccatcgccagggaaggagacctgctgaccaaggagaggctgtgctgcggcttgtccatg
ttcgaggtcatcctgacccgtgttcgcagcttcctggatgacctcatctggcgcgggccc
ctgcccagcaacggcgtgatgcacgtggacgagtgtgtggagttccaccggctctggagc
gccatgcagttcgtgtactgcatccccgtgggcgcccacgagttcaccgtcgagcagtgc
tttggggatgggctgcactgggctgggtgtatgatcatcactctgctagggcagcagagg
agatttgacatcctggatttctgttaccacctgctgaaggtgcagaagcacgatggcaag
gatgaagtcatcaagagtgtgcctctgaagaaaatggtggacaggatccgcaagtttcag
gtgctgaacgacgagatctttgccatcctaaacaagtatctgaagtctggggacggggag
aacacgccagtggagcatgttcgctgtttccagccgccaatccaccagtctctggccagc
aactga
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