Lepisosteus oculatus (spotted gar): 102693859
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Entry
102693859 CDS
T07349
Symbol
ambra1
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1 isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04137
Mitophagy - animal
loc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102693859 (ambra1)
04137 Mitophagy - animal
102693859 (ambra1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102693859 (ambra1)
03029 Mitochondrial biogenesis [BR:
loc03029
]
102693859 (ambra1)
Membrane trafficking [BR:
loc04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
102693859 (ambra1)
Mitochondrial biogenesis [BR:
loc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
102693859 (ambra1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
102693859
NCBI-ProteinID:
XP_015194057
Ensembl:
ENSLOCG00000005523
LinkDB
All DBs
Position
LG27:11707860..11814091
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AA seq
1398 aa
AA seq
DB search
MKVTHQKNSVRILSGRERGAQGFGSQRLLQQLVEEKARCMKWQSQKVELPDSPRSTFLLA
FSPDRTLMASTHVNHNIYITEVKTGKCIHSLVGHRRTPWCVTFHPTISGLVASGCLDGEV
RIWDLHGGSENWFTESNAAIASLAFHPTAQLLLIATNNEIHFWDWSRREPFAVVKTASEM
ERVRLVRFDPLGHNLLTAIVNPSNQQNDDDSEIPMDSVEMPHFRQRSLLQSQPVRRTPLL
HNFLHMLSSRSSGTQAGEQPPTEESAVPPSLPSGRYTSLRDRPAYQGCVQHLGMVCFCSR
CSVARNPPSSPLPGEDAAGSQAAGSEAAPHASTFTSARTEPRLPSEQRGSERPSAFSSVH
SSTAGNTLRNLWPGPGRRGLLGLMANQPLGHQQMTRDPSWRLAGTFWNTQSETGDPGSSG
GGGMPPPRTSASSVSLLSVLRQQEGGSPSPVYTSATEGRGFHVPADGGGGGSGSGSTTAA
AANNNNNGCTVSTSSGHHPLDEASQSSPASIRNVLQCNLSRYFMEYDRMQDMEQAMSGEG
TQPQPTEELLNNNIDSDRPGPSHYQPPHSSENSSNLFRGHLNRCRACHNLLTFNHDTQRW
ERTGQTSSTTSEEGTSWQAPNPAFEGTGGGTREPQPPERRGGAPGAVEPGSGTSSSESGF
HRPSPATPQGEQTVGLVYNQETGQWERVYGQGAASRPGNVPQEALNQEMPEENSDEDSLR
RRLLESSLISLSRYDISGSRDHPIYPDPARLSPAAYYAQRMIQYLSRRDSIRQRSLRYQQ
NRLRPSSDGPASNPSQSMENNEVEFEEFEDNGDRARHRTPRNARMSAPSLGRFVPRRFLL
PEYLPYAGIFHERGQPGLATHSSVNRVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKFD
LPEISNATINVLVPNCKIYNDASCDISADGQLLAVFIPSSQRGFPDEGILAVYSLAPHNL
GEMLYTKRFGPNAISVSLSPMGRYVMVGLASRRILLHPTTDHMVAQVFRLQQPHGGETSM
RRVFNVVYPMAPDQRRHVSINSARWLPEPGLGLAYGTNKGDLVICRPVDSRSESDAQSDH
VNEPIFAINNNSGSRNTERAGTSRATWRSDRDLGLMNAIGLQPRHPAPSVTSQGTQTPIL
QLQNAETQTDRDLQETGTSRATNAVPGPLEDPGPGTSTEGSFETPSDSLHPEGGIADASA
EASTSAGEGSEYGTSEDALSRIRRLIAEGGMTAVVQREQSTTMASMGGFGNNIIVSHRIH
RGSQTGADSSGARGHRAARECFSPGPSTSSSSSSFSLSEPGPSRCRILAHTVQLTHAPAS
PTDPARSPGAATPSPQFSTIFSSGGAGTSRVPAAAPMDTDDVFESGNADDGDVRTSSSSS
SSSPANNNSSFPGDPYSR
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcactcaccagaagaactcggtgcggatcctgtccggccgggagcgtggcgcc
cagggcttcggctcgcagcgcctgctgcagcagctggtggaggagaaggcgcgctgcatg
aaatggcagagccagaaagtggagctgccggacagccctcgttcaacgttcctgcttgct
ttcagtcctgacaggacgttaatggcttccacccatgtgaatcacaacatttacatcacg
gaggtgaagacgggcaagtgtatccactcgctggtgggccaccggcgtaccccctggtgc
gtgacctttcaccccaccatctcagggcttgtggcatcaggctgtctggacggagaagtc
cgcatctgggacctgcatggtggcagtgagaactggttcacagagagcaacgcagctata
gcttccctggccttccaccccactgcccagctcctgctcatcgccaccaataacgagatc
cacttctgggactggagccggagggagcccttcgctgtggtgaagaccgccagcgagatg
gagcgagtcagactggtgaggtttgatccattgggccacaaccttttgacagccattgtt
aacccttcaaaccagcagaatgatgacgactcggagatccccatggacagcgtggagatg
ccacacttcagacagcgctcccttctgcagtcccagcctgtgcgtcgcaccccgcttctc
cacaacttcctgcacatgctctcctcgcgcagttcaggcacgcaagccggggagcagccc
cccaccgaggagagcgccgtgccccccagcctgccttccgggcggtacacctccctgagg
gaccggccggcctaccagggctgcgtccagcacctggggatggtgtgcttctgcagccgc
tgctcggtggcgcgcaaccccccgtcctcccctctcccgggcgaggacgccgccggctcc
caggcagccggctcggaggcggccccccacgcttccaccttcacctccgcccgcaccgag
ccccggctccccagcgagcagaggggcagcgagcggccctccgccttcagcagcgtgcac
agcagcacggcggggaacacactgaggaacctgtggccaggccccgggcgcaggggcctg
ctcggcctcatggccaatcaacccttagggcaccagcaaatgacccgggacccctcttgg
cgtctggcgggaactttttggaacacccagagtgaaacgggggatcctgggagcagcggc
ggtggggggatgcccccacctcggactagcgcttcctccgtcagcctgctgtcggtgctc
aggcagcaggagggcggctctccgtcccccgtctacacgtccgccaccgagggccggggc
ttccacgtgccggcggatggcggaggtggcggcagcggcagcggcagcactaccgccgcc
gccgccaacaacaacaacaacggctgcaccgtcagcacgagcagcggccaccaccccctg
gacgaggcgagccagagcagcccggcctccatccgcaacgtcctccagtgtaacctgagc
cgctacttcatggagtacgaccgcatgcaggacatggagcaggccatgagcggtgagggc
acccagccgcagcccaccgaggagctgctcaacaacaacatcgactccgaccggcccggg
ccctcccattaccagcccccccacagcagcgagaacagctccaacctcttccgtggccac
ctcaaccggtgtagggcttgccataacctgctgaccttcaaccatgacacccagcgctgg
gaaaggacaggccagacctcctccaccacgagcgaggagggcacttcctggcaagctcct
aacccggcttttgaaggcacgggcggtgggacgcgggagccccagccgccggagaggaga
gggggggccccgggggctgtggagcccggcagcgggacatccagcagcgagagcggtttc
cacaggccaagccctgccaccccgcaaggggagcagacagtgggcctggtctataaccag
gagaccgggcagtgggagagagtttatgggcagggagctgcaagccggccagggaatgta
ccacaagaggccttaaaccaagaaatgcctgaagagaattcagatgaagattctctccga
aggaggctgttggagtcctctcttatctccctttctcgatatgacatatcagggtctcga
gatcatcccatttacccagatcccgccaggttgtcccctgctgcctactatgcccagagg
atgatccagtatctgtcccgccgggacagtatccgccagcgctccctgcgctaccagcag
aaccggctgcggccctcctccgacggcccggccagcaacccctcccagtccatggagaac
aacgaggtggaattcgaggagtttgaggataatggcgacagagccaggcaccgaacacca
cgcaatgctcgaatgtctgctccatctctggggcgctttgttcctaggcgtttcctgtta
ccagagtatctaccgtatgctgggatttttcatgagagaggccagccaggcttggccact
cactcttccgttaatagagtcctagcaggtgctgttattggagatggacaatcagcagtc
gccagcaacatagcaaatacaacctacaggctgcagtggtgggatttcaccaagtttgac
cttcctgagatcagtaacgccaccatcaacgttttggttccgaactgcaagatctacaat
gatgccagttgtgatatctctgctgacgggcagcttctggcagtgttcattcccagcagc
cagcgaggttttccagatgaaggcatcctagcagtgtactctctggcaccgcacaacctg
ggagagatgctctacaccaagagattcggtcccaatgccatctcagtgagcctgtcccct
atgggtcgctacgtgatggtgggcctggcctccaggaggatcctcctgcaccccaccacc
gaccacatggtagcccaggtcttccgactacagcagccacatggtggggagacgtccatg
aggagggtgttcaatgttgtttacccaatggctccagaccagaggaggcacgtcagtatc
aattctgcgagatggctgccagagccgggcttggggctggcctatggaactaacaaagga
gatctggtcatttgcaggcctgtggattcccggtcggaatctgatgcacagtcggatcat
gtcaacgagcccatcttcgccattaacaacaacagtggcagccgcaacaccgagagggct
gggacaagcagggcgacctggaggtcagacagggatttgggcctgatgaatgcgatcggt
ttgcagccacgtcatcctgccccttctgtgacatcccaaggtactcagacacccatccta
cagctgcagaacgcagagacgcagactgaccgtgacctgcaggagaccggcacatcacgg
gctaccaatgctgtgcctggcccactggaggatcccggccctggaaccagtacagagggg
agctttgagacgccctccgacagcctgcacccagagggcggcatcgcggacgcgtcggca
gaagcaagcaccagtgccggagagggctcggaatatggcaccagcgaggacgcgctttcc
cggattcgccgactcatcgcggaggggggcatgacagccgtggtgcagcgtgagcagagc
accaccatggcgtccatgggcggctttgggaacaacatcatcgtcagccaccggatccac
cgcggctcccagaccggcgccgactcatccggggccagagggcaccgagcggcccgggaa
tgtttctcccccggcccctccacttcctcctcctcctcctccttctctctcagtgaacca
ggtcccagccgctgccgcatcctggcccacactgtgcaattaactcacgcgcccgccagc
cccacggaccccgcgcggagccccggggcggccaccccttccccgcagttttcaaccatc
ttctcctccggcggagcgggcacctccagggtgccagccgcggctcccatggacaccgac
gacgtctttgagagcggcaacgctgacgacggggacgtccgcacttcctcctcctcctcc
tcctcttctccagctaacaataacagcagcttcccgggagatccttacagccgataa
DBGET
integrated database retrieval system
