Lepisosteus oculatus (spotted gar): 102693907
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Entry
102693907 CDS
T07349
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
102693907 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
loc03000
]
102693907 (srebf1)
04131 Membrane trafficking [BR:
loc04131
]
102693907 (srebf1)
Transcription factors [BR:
loc03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
102693907 (srebf1)
Membrane trafficking [BR:
loc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
102693907 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
102693907 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
ZapB
Motif
Other DBs
NCBI-GeneID:
102693907
NCBI-ProteinID:
XP_015215650
Ensembl:
ENSLOCG00000008766
LinkDB
All DBs
Position
LG13:complement(16125250..16139850)
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AA seq
1159 aa
AA seq
DB search
MSGLPFDDPSLDHLDPSLSLHEPSEIDTALLSDIDDMLQLINSQDMEFPGLFDHPPFGAG
GPLQDAPVLAHSAPSSSSSSSLLGPGSTPHLDALLGPPAKQPPPSAAKLYPPPSQQPQLA
APFAQSSLPAPPAPPPAPLQDSKPPTPQPSPPPKQQQQQQQQPLQPQTQAAAPPPSAVRT
PSLGSSQPVLFSSPPAPGYQSPAGYAAGPQVCSTQPSLPASPQQIQPMAIQTQVQSLPAP
QLLAATASPPTQTISHQVHQVPVSTVLLQPQFIKADSLLLTALKPDAGSVVTAVKTPCMT
TLASSTTPVQTTSIQALVSGGTILTTVPVMLDTDKLPINRIVANGKPCGLPSKGEKRTAH
NAIEKRYRSSINDKIIELKDLVAGTEAKLNKSAVLRKAIDYIRFLQQSNQKLKQENMALK
MAAQQNKTLKDLVAGVPMEVDGVSGELKAEAVELPTPPPSDAGSPSHSSPFSQCASDSEP
DSPMFEDSKAPVKQELPSPGSVGMLDRSRLALCAFTFLFLSLNPLAALLGGTGGGSSPSE
RAAPSSPGRSMLSVDSAELPGWLDWLLPTLFLWLLNGALVAAVLIRLLVYGEPVTRLHSD
SSVLFWRHRKQADLDLARGDFAQASQNLWTCLKALGRPLPTSQLDLACAVLWALLRLCLQ
RLWVGRWLAGRAGGLRRDRPLQDDAKKSSRDAALVYHRLHQLHMTGKLGGSQLSAVHMAL
SAVNLAECAGDNLSIATLAEIYVSTALRVKVSLPRALHFSMRVFLSSARQLCLAPCGTVP
PAMQWLCHPLGHRFFVDGDWSVRSSPRESVYSQAGNTVDPLAQVTQAFREHLLEKALYCV
AQPQGEKALAAGEGEHADALEYLQLLNSCSDAAGATAQSFAIGSNTAALTGCDPQARWWS
AVVVVVVNWLQGDDAAAERLYPAVEHLPKSLQSAESPLPRAALCAFRAVRAQLAKPENCQ
MTLSHCERASSLLRDSLHLGPHCHSSNIDKAVQLLLCDLLLVTRTQVWQQQRGAAGGALQ
ATPPELQGFQQDLSSLRKLAQSFRPAMRRLFLHEATARLMAGASPTRTHQLLDRSLRRRA
TPGSRTEECETRPGQREQVEAVMLACRYLPPSFLSAPGQRVGMLADAARTLEKLGDKRTL
HDCQQMIIRLGSGTTVTSS
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcctgccctttgacgacccgtcgctggaccacctggaccccagcctgtctctt
catgagcccagtgagatcgacaccgcgctgctcagcgacatcgacgacatgctgcagctc
atcaacagccaggacatggagttccccggcctgttcgaccatccccctttcggcgcgggg
ggtcccctgcaggacgcccctgtcctcgcccactccgccccctcctcctcctcctcttcc
tctctgctgggcccgggcagcaccccgcacctcgacgccttgctgggacctcccgccaag
cagccccccccttctgcggcgaagctgtacccgcccccgtcccagcagcctcagctggcc
gcccccttcgcccagagcagtcttccggccccgccagcgcccccgcctgcgccgctgcag
gacagcaagccccccaccccgcagccctcgccccccccaaaacagcagcagcagcagcag
cagcagcctctacagccccagacccaggcagcggcgccccctccgtccgccgtgaggacc
ccgagtctcggctccagccagccggtgctcttcagctcgccacccgccccaggctaccag
agtccggccgggtatgcagccgggccgcaggtgtgctccacccagcccagcctccccgcc
tccccccagcagatccagccaatggccatccagactcaggtccagagcctgcccgctccg
cagctattggccgccaccgcgagcccgcccacgcagaccatctcccaccaggtgcaccag
gtcccggtcagcacggtcctgctgcagccccagttcatcaaggcggactctctgctgctg
acagccctgaagccggacgctggctcggtggtcacagcagtgaagaccccctgcatgacc
actctggccagctccaccacgcctgtgcagaccacctccatacaggctctggtgagcggc
ggcaccatcctgaccaccgtgccagtgatgctggacaccgacaagctccccatcaaccgc
atcgtggccaacggcaagccctgcggcctgcccagcaagggcgagaagcggacggcgcac
aacgccatcgagaagcgctaccgctcctccatcaacgacaagatcatcgagctcaaggac
ctggtggctggaacagaggccaagctcaacaagtcggcggtgctgagaaaggccatcgac
tacatccgcttcctgcagcagtccaaccagaagctgaagcaggagaacatggcgctgaag
atggcggcgcagcagaacaagacgctgaaggacctggtggccggggtgccgatggaggtg
gacggcgtgagcggcgagctgaaggccgaggccgtggagctgcccaccccgccaccctcc
gacgccggctcgccctcccacagcagccccttctcccagtgcgccagcgactccgagccc
gacagccccatgttcgaggacagcaaggcgccggtcaagcaggagctgccctctcctggc
agcgtgggcatgctggaccgctctcgtctggccctgtgtgccttcaccttcctcttcctg
tccctcaacccgctggcggccctgctgggcggcacaggcggcggctcgagcccctcggag
cgcgcggccccctccagccccggccgcagcatgctcagcgtggacagcgcagagctcccc
ggctggctggactggctgctgcccactctgttcctctggctgctcaacggtgctttggtg
gctgcggttctgatccggctgctggtgtacggcgagccagtgacccggctgcactcagac
tcctcggtgctgttctggagacaccggaagcaggctgacctggacctggctcggggcgat
tttgctcaggcctcccagaacctgtggacgtgcctgaaggcgctgggccgccccctgccc
acctcccagctggacctggcctgcgcggtgctgtgggcgctgctccggctgtgcctgcag
aggctgtgggtgggccgctggctggcggggcgcgcggggggcctgcgcagagatcgcccc
ctgcaggacgatgccaagaagagcagccgagacgcagccctggtttaccatcgcctgcac
cagcttcacatgacaggcaaactggggggcagccagctgtcggctgtccacatggccctg
agcgccgtcaacctggccgagtgcgcaggggacaacctgtccatcgccacgctggcggag
atctatgtgtccacagccctgagggtcaaagtcagccttccccgagccctgcacttcagc
atgcgggtgttcctgagcagcgcgcggcagctgtgcctggccccctgcggcaccgtgccc
ccggccatgcagtggctgtgtcacccgctgggccaccgcttcttcgtggacggagactgg
tcggtgcgcagctccccgcgggagagcgtctacagccaggcggggaacacagtggaccct
ctggctcaggtgacccaggcgtttcgggagcacctgctggagaaggcgctgtactgcgtg
gcccagccgcagggcgagaaggcgctggcggcaggcgagggggagcacgcggacgccctg
gagtacctccagctgctgaacagctgttccgatgcagcaggcgccacggcgcagtccttc
gccatcggctccaacacggcggcgctgaccggctgtgacccccaggcgaggtggtggtcg
gcggtggtggtcgtggtggtgaactggctgcagggcgacgacgctgcggctgagaggctg
taccccgccgtggagcaccttcccaagagcctgcagagtgccgagagccccctgcccaga
gcagcgttgtgtgcttttagagcagtccgcgcccagctggccaaacccgagaactgccag
atgacgctcagtcactgtgagagagccagcagcctcctgagggacagcctgcacctggga
ccccactgccacagcagcaacattgacaaggctgtccagctgctactgtgtgacctgctc
ctggtcacgaggacgcaggtgtggcagcagcagaggggggccgcagggggggccctgcag
gccacgcccccggagctgcagggcttccagcaggacctgagcagcttgaggaagctggca
cagagcttcagacccgccatgcgcaggctgttcctgcacgaggccacggcccgcctgatg
gccggcgccagccccacacgcacccaccagctcctggaccgcagcctgcggcgccgggca
acgccgggcagcaggacagaggagtgcgagacgcggccgggacagcgagagcaggtggag
gcggtgatgctggcgtgccgctacctgcccccctccttcctgtcggcgccggggcagcgt
gtgggcatgctggcggacgccgcgcgcacgctggagaagctgggcgacaagcgcacgctg
cacgactgccagcagatgatcatcaggctgggcagcggcaccaccgtcacctccagctag
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