Lepisosteus oculatus (spotted gar): 102694002
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Entry
102694002 CDS
T07349
Symbol
itga5
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03266
Virion - Herpesvirus
loc04145
Phagosome
loc04510
Focal adhesion
loc04512
ECM-receptor interaction
loc04810
Regulation of actin cytoskeleton
loc04820
Cytoskeleton in muscle cells
loc05100
Bacterial invasion of epithelial cells
loc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
102694002 (itga5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102694002 (itga5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102694002 (itga5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
102694002 (itga5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
102694002 (itga5)
04810 Regulation of actin cytoskeleton
102694002 (itga5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102694002 (itga5)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102694002 (itga5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
loc04147
]
102694002 (itga5)
04515 Cell adhesion molecules [BR:
loc04515
]
102694002 (itga5)
04090 CD molecules [BR:
loc04090
]
102694002 (itga5)
Exosome [BR:
loc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102694002 (itga5)
Cell adhesion molecules [BR:
loc04515
]
Integrins
Integrin alpha subunits
102694002 (itga5)
CD molecules [BR:
loc04090
]
Proteins
102694002 (itga5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
Integrin_A_Ig_2
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
102694002
NCBI-ProteinID:
XP_015199570
LinkDB
All DBs
Position
LG4:12845635..12909702
Genome browser
AA seq
840 aa
AA seq
DB search
MGSARQRLGNSPDFLTPASLPRRALLCLSLAVLAKLCAAFNLDSENPTVYSGPNGSYFGY
SVEFYLTNSSSVSVLIGAPKANTSQPNITEGGAVYYCPWSLSQSDCSSIGFDNEGDRYYT
INDTSERVEFKSHQWFGATVRSHENTILACAPRYYWRTTNEEAGSDATGTCYLSVNNFTK
FVEYAPCRSERNGPSGQGYCQGGFSADFTKNGRVVVGGPGSFFWQGQLVSATKENIVKDY
YTGYFKLSVRGQVQTAQAQPSYDDSYLGYSLAVGEFSGDLDEDFVAGVPKGALIYGYVSI
LNGTDLKSMMNFTGEQMGSYFGYAVAATDINNDGMDDLLVGAPMFMVRGSDGRLEEVGRV
YVYLQTGPLDFGPNPQLLTGTQAFSRFGSSIAPLGDLNQDGFNDVAIGCPFGGEDQRGLV
LIYNGQAGGLRDTPSQVLVGQWASSSLPASFGYALRGNKDLDKNGYPDLIVGAFGMDKAV
LYRARPIVNASASLTISPTMINPEEKSCVVNKDGTSTHVSCVNLSFCLSANGKHLPDEIE
FLAEVQLDRMKQKGAVKRALFMSTQQPVMQETVRVRNGARSCRDVKIYLREEHEFRDKLS
AIHVALNFSLDPRAAADRHGLRPILNYQTTELIEQKAQILLDCGEDNICVPDLKLAVHGG
NQKVLQQSPTEQPLVLTPSPDQHRVQKREASRDPLSELGTLSCSQVECWRLRCEVGQLER
GTSAILKVRSRVWAETFTQRTYPYVLECTATYNVLKMPYKILPREPPTGSKQVSTQVIWN
KPDSQYAVPLWIIILAILAGLLLLALLIYVLYKLGFFKRSLPYGTAMEKAQLKPQAASEA
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgggctcggcgagacagcgcttaggaaactctcccgactttttaactccggcgagcctc
ccgcgacgagcgctgctctgcctctcgcttgcggttttggcgaagctgtgcgctgcgttt
aacttggactcggagaaccctaccgtctatagtggacccaacgggagttattttggctac
tctgtggaattttacttgaccaattcttccagtgtcagcgttctgattggggctcccaaa
gccaacaccagccaaccgaacatcaccgagggcggggctgtttactactgcccgtggagc
ctgagccaatcggattgtagcagcattgggtttgacaatgaaggagaccgctactacacc
attaacgacaccagcgagcgagtggagttcaaatcccaccagtggtttggagcgacagtg
cgttcccacgagaacaccatcctggcctgcgcgccgcggtactattggaggaccacaaac
gaagaggcgggctcagacgccacgggcacctgctacctgtcagtcaacaacttcaccaag
tttgtggagtacgccccctgtcgctcggagaggaacggcccttctggacaaggatactgc
cagggcgggttcagtgctgattttaccaagaatggcagagttgttgtggggggacctggc
agcttcttttggcaaggtcagctggtctctgccaccaaggagaacatcgtgaaggactac
tacaccggctacttcaagctgtccgtgagggggcaggtccagacagcccaggcgcagccc
tcctatgacgacagttaccttggttactctctggcggtgggggagttcagcggggatctg
gatgaagattttgtggcaggggtcccgaaaggagccttgatctacggctacgtctccata
ttgaacgggacagacctgaaatccatgatgaacttcactggcgagcagatgggctcctac
tttggctatgcagtggccgccactgacatcaacaacgatggcatggacgacctgctggtg
ggagctcctatgtttatggtacgggggtcagacggacggctggaggaagtggggcgcgtc
tacgtctacctgcagacaggacccctggacttcggccccaacccccagctgctgacgggg
acccaggcgttcagccggtttggaagctccatcgcgcccctgggggacctcaaccaggat
gggtttaatgatgtcgcaatcggctgtcctttcggaggggaagaccagcggggactggtc
ctcatctacaacggacaggccggtggcctcagggacactccttctcaggtcctggtaggc
cagtgggcttccagcagtctgccggccagctttggatacgccctccgtgggaacaaagac
ctggacaagaacggctatccagatctcattgtcggagcatttggaatggacaaagcagtg
ctgtacagggctcgtccgatcgtcaatgccagtgcttccctgaccatctctcccactatg
atcaacccagaggagaagtcctgcgtggtcaacaaagatggaacatccactcatgtctct
tgcgtcaacctcagtttctgcctgtctgccaacgggaagcatttgcctgatgaaatagag
ttcctggcagaggtgcagctggaccggatgaagcagaagggggcggtgaagcgggctctg
ttcatgagcacccagcagcccgtcatgcaggagaccgtgcgcgtgcggaacggcgcccgc
agctgcagagacgtcaagatctacttacgggaggaacacgagttccgggacaagctgtct
gccatccacgtggccctcaacttcagcctggacccccgcgcggctgccgaccggcacggc
ctgaggcccatcctcaactaccagaccacggagctcattgagcagaaggcccagattctg
ctggactgcggagaggacaacatctgtgtaccagacttgaaactggctgtgcatgggggg
aaccaaaaagtgctccagcagtcgcccactgagcagccgttggttctgacccccagcccg
gatcagcaccgcgttcagaagagagaggcttctcgagaccccctctccgagctcggcacg
ttgagctgctcgcaggtggagtgctggaggctgcgctgcgaggtgggccagctggagagg
ggcaccagcgccatcctgaaagtccgctcccgcgtctgggcagagaccttcacgcagaga
acatacccctatgtcctggagtgcactgcaacctacaacgttctcaaaatgccctacaag
atcctgcccagggagccgcctactggatctaaacaggtcagcacgcaggtgatttggaac
aagccggacagccagtacgctgttcccctctggatcatcatcctggccattttagctggt
ctcctgctcctagctctgctcatctatgtgttatataaacttggcttcttcaaacgatct
cttccctacggcactgcaatggagaaagcccaactgaaacctcaggctgcatctgaggcc
tag
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