Lepisosteus oculatus (spotted gar): 102694084
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Entry
102694084 CDS
T07349
Symbol
rnf38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102694084 (rnf38)
Enzymes [BR:
loc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102694084 (rnf38)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102694084 (rnf38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
zf_RING_Vps8_fungal
zf-RING-like
zf-C3H2C3
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
102694084
NCBI-ProteinID:
XP_015201268
Ensembl:
ENSLOCG00000012813
LinkDB
All DBs
Position
LG4:complement(61266464..>61279678)
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AA seq
399 aa
AA seq
DB search
PLCRPLPLDLSPPVRRQRGRRDRLSRHSAVGQDENFHHLPYGQPPSLEEPRAFHPPNMSP
RLLHPAAHPPQQSAVMVDIHDQIHQGTVPVSYTVTTVAPHGIPLCTGQHTQQVPGCSVVF
SGQHYPVCSVPPPMLQACSVQHLPVPYAFPSLISSDPFLIHPPHLSHHPPHLPPPGQFVP
FQTQQSRSPLQRIENEVELLGDHLSVGGGFNYPHSSHPTSLPPSTPLQFLSHDPLHQELF
GVPYPHFMPRRITGRRYRSQQPLPPPPYHPSFLPYFLSMLPVQPTVGPAISLELDVDDGE
VENYEALLNLAERLGEAKPRGLMKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLL
RVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
cctctgtgtcgtcctcttcctcttgacctcagccctcccgtgaggcggcagcgggggcgc
agggaccggctgtccaggcacagcgccgtcgggcaggacgagaacttccaccacctgccc
tacggccagccccctagcctggaggagccccgcgccttccacccccccaacatgtcccct
cggctcctgcaccccgccgcccacccgccccagcagagcgccgtcatggtggacatccac
gaccagattcaccagggtaccgtgcccgtgtcgtataccgtgaccacagtggcgcctcac
ggcatccccctgtgcacgggccagcacacgcagcaggtcccgggctgctcggtggtcttc
agcgggcagcactatcccgtgtgcagcgtcccacccccgatgctgcaggcatgctctgtt
cagcacctgcccgttccctatgcattcccgtctctgatctccagcgaccccttcctaata
caccccccccacctctcacaccacccaccccacctccctccccccggccagttcgtcccc
ttccagacccagcagtcccgatcgccactacaaaggatagagaacgaggtggagctcctg
ggtgaccacctgtcagtggggggagggttcaactaccctcattcttcacaccccaccagc
ctgcccccttccacaccgctccagttcctatcccacgaccccctgcatcaagagctgttc
ggagttccttatccacatttcatgcctcgacgcatcactgggcgcagatatcgatcccag
cagcctttgccccctccaccttatcaccccagcttcctgccatacttcctctcaatgctt
ccagtacagcccacagtgggaccagccattagtctagagcttgatgtggatgatggtgaa
gtagaaaattatgaggccttgctgaacctggcggagcgtcttggagaagccaaaccccga
ggcttgatgaaagccgatattgaacagcttccatcttatcggttcaaccccaacaaccac
cagtccgagcagaccttgtgtgttgtctgtatgtgtgactttgagtccagacaactactt
cgagtcctaccgtgtaaccacgaattccacgccaagtgtgttgacaaatggctgaaggcg
aaccgcacctgccctatctgccgggccgacgcctccgaggttcaccgggattcggaatga
DBGET
integrated database retrieval system
