Lepisosteus oculatus (spotted gar): 102694367
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Entry
102694367 CDS
T07349
Symbol
tank
Name
(RefSeq) TRAF family member-associated NF-kappa-B activator isoform X1
KO
K12650
TRAF family member-associated NF-kappa-B activator
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04140
Autophagy - animal
loc04621
NOD-like receptor signaling pathway
loc04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102694367 (tank)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102694367 (tank)
04622 RIG-I-like receptor signaling pathway
102694367 (tank)
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Gene cluster
GFIT
Motif
Pfam:
TBD
FliT
DUF3496
Csm1_N
DUF641
REST_helical
DUF3450
Sec10_N
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
102694367
NCBI-ProteinID:
XP_006636682
Ensembl:
ENSLOCG00000008612
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All DBs
Position
LG12:complement(18595483..18610793)
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AA seq
369 aa
AA seq
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MERGLDRNIGDQLNKAYEAYRQASIEKENARKELKQKTEAYDRYICELHQQLENQKQEIA
SLKSQLNSVGSLSKGRVKGSDATPEIKDSHLPAQRTHETKPLSQCDHLHETNRQRQKHVM
ESMKTPEMTVYSSPGISDDKSKEILEAFQEIQGKFHVIQNLTRKQKDHLNKLCRANDTAQ
EQQFSMPIQCTDVTVEQAEGPFTSAKKSDSDKETTSASITSRGVCPEEGEFMESLSKLSI
KFPPAESEYDVFLNSAPERKLDLAPGRNDHALATSLPRVTDEQTVDIPVQYAFANPTSQT
PSPSTSFTHENVRGPQQPYWSPEHCEGGYTDPEQKRNPENCAFCDAILPEDTFFRHLNSH
FENKTRNGF
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaggtttagacagaaatattggagaccagctcaacaaagcctatgaagcctac
cgtcaagcatcaattgagaaagaaaatgctaggaaggaactcaagcaaaagacagaagct
tatgaccggtatatctgtgagctccatcagcagttagaaaaccaaaaacaggaaattgct
tcacttaaatcccaactaaactctgtgggaagcttgtctaaaggaagggtgaaaggcagt
gatgctacgcccgaaatcaaggatagtcatttgccagctcaaagaacacatgaaacaaag
cccttgtcacaatgtgatcatcttcacgagacaaacaggcagagacaaaaacatgtaatg
gaaagcatgaaaactccagagatgactgtttattcatctcctggaatttctgatgacaaa
agtaaagaaattctcgaggcatttcaggagatccagggtaaattccatgtgatacagaat
ttaacaagaaaacagaaggatcacctgaacaaattatgcagagcaaatgacacagcacaa
gaacaacagttttccatgcctattcagtgcactgatgtaacagtagaacaagctgaggga
cccttcacatcggccaaaaagtctgactccgataaagagacaacctctgcatctatcaca
tctcggggagtctgtccagaagagggggaattcatggaatctttgtctaaactgagtatc
aagtttccaccagcagagagtgaatatgacgtcttcttaaacagtgcaccagaaagaaaa
ctagatcttgcaccaggaagaaatgatcatgctttggctaccagcctcccaagggtgact
gatgaacagactgtggatattcccgtacaatatgcgtttgcaaatcctacatctcagaca
ccttccccttcaacttcttttacccatgagaacgttcgaggaccacagcagccctattgg
agccctgagcactgcgagggaggctatactgatccagagcagaagagaaaccctgaaaat
tgtgcattctgtgatgccatcctcccagaagacactttttttaggcatcttaattcacac
tttgaaaataaaacaaggaatggattttaa
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