Lepisosteus oculatus (spotted gar): 102694413
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Entry
102694413 CDS
T07349
Symbol
gabra6
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04080
Neuroactive ligand-receptor interaction
loc04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102694413 (gabra6)
04082 Neuroactive ligand signaling
102694413 (gabra6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
loc04040
]
102694413 (gabra6)
Ion channels [BR:
loc04040
]
Ligand-gated channels
GABA-A
102694413 (gabra6)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
102694413
NCBI-ProteinID:
XP_015205075
Ensembl:
ENSLOCG00000010706
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All DBs
Position
LG6:complement(28934412..28952238)
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AA seq
463 aa
AA seq
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MQIITVDKGFLVLCARGMAFLINRFLLVCVGVAWGTQPTEVSIFSENITRILDRLLDGYD
NRLRPGFGGPVTEVKTDIFVTSFGPVSDVEMEYTMDVFFRQTWIDERLKFDGPIEILRLN
NLMVSKIWTPDTFFRNGKKSISHNMTTPNKLFRIMQNGTVLYTMRLTINAECPMRLMNFP
MDGHACPLKFGSYAYPKSEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETLKSNT
GEYIVMTVYFYLQRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNIQAQRALRKVAKAAA
LEAAAATSEEEIVSHSDSNSSLKKRLNSVVSRNEPPIEESYTPPPQPQFLQQGSAIPANI
QLTGTSKIDKYARILFPLSFGAFNLVYWIVYLSKDTMELSTHS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattattacagttgacaagggctttttggtcttgtgcgccagaggcatggctttt
ctgataaatcgctttctcttggtttgtgttggcgtggcgtggggaacccagccaacagaa
gtgagcatcttttcagaaaacatcacacgtattttggacaggctgctggatggctacgat
aaccgactacgacctggatttggaggtcctgttactgaagtcaaaacagacatctttgtt
accagttttggcccagtttcagatgttgagatggaatatacaatggatgtattctttaga
cagacatggattgatgagagattgaagtttgatgggcccattgaaattcttagactcaac
aatctaatggttagtaagatctggactcctgacaccttcttcagaaatggcaagaagtcc
atctctcacaacatgaccacccctaacaagcttttcaggatcatgcagaatgggacagtg
ctatatacaatgagactcaccatcaatgcagaatgccccatgagattaatgaactttcca
atggatggtcatgcatgtcctttgaagtttggtagctatgcctatcccaaaagtgaaatc
atttatacatggaagaagggaccattgtactcagtagaagtcccagaagagtcatcaagt
ttacttcagtatgatctaataggacagactgtgtcaagtgaaacacttaaatcaaacaca
ggtgaatacatagttatgacagtttacttctacctgcaaaggaagatgggatacttcatg
attcagacatacattccgtgcataatgacagtcatactttctcaggtgtccttttggatc
aataaggagtcagttcctgctagaactgtatttggtatcaccactgtccttaccatgact
accctcagcatcagtgctcgacactccctgccgaaagtgtcctacgccactgccatggac
tggttcatagcagtatgctttgcctttgtcttttctgcgctcattgagtttgcggctgtc
aactactttaccaacatccaggctcagagagcactgcgaaaggtggccaaggcagcagca
ttagaggctgcagctgcaacgagcgaggaggagattgtgtcgcactcagattccaatagc
agcctaaagaagagattgaactctgtggtttcccgtaacgaaccgccgattgaagaaagc
tatacacccccaccacagccacaattcctgcagcaaggatctgccattcctgcaaatatc
caacttacggggacaagcaaaatagacaaatatgcccgtatacttttccctttgtccttt
ggtgcattcaaccttgtgtactggattgtctatctgtcaaaggataccatggagctatca
actcactcttga
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