Lepisosteus oculatus (spotted gar): 102694546
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Entry
102694546 CDS
T07349
Symbol
zc3h12a
Name
(RefSeq) ribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102694546 (zc3h12a)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
102694546 (zc3h12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
UBA_N4BP1
zf-CCCH
UBA_3
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
102694546
NCBI-ProteinID:
XP_015204339
Ensembl:
ENSLOCG00000003232
LinkDB
All DBs
Position
LG6:5391097..5402479
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AA seq
669 aa
AA seq
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MLSLNSFPSATRHSKGSHAITRMDRGVHYPSREEKQGSPDVAHLEASEFQMQVDFFRKLG
YSVDEVVAVLHKLGVNADTNTVLGELVRCGATASEREGVTGSPTGPVLVSRGGSSARTPS
SLSASPPPPPEEDEEEGGHLKPIVIDGSNVAMSHGNKEVFSCRGIQLAVNYFLERGHSDI
TVFVPSWRKEQPRPDVPITDQHILRDLERKKIVVFTPSRRVGGKRVVCYDDRFIVKLAHE
SDGIIVSNDTYRDLQSERPEWRRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKK
PLVQELKRQHCPYGKKCTYGIKCKFYHPERINQTQRSVADELRENAKLSAVRAGTPASSL
KDDKKPALSHKSPHPEHSSVFSLEQDIEQKLTLDRRNSLRKGHVTENVVVLRGMPSGRKP
SKKIPFSQSEWSSHPSATNMDSFVFNSQEHLDSGLGSYESQYSEMSRGQACHSESYVTEQ
RAPCCCLGNRQVYLHSNNPERHDSYQQYSCCSHKAMSAGANLQPFNQDLSSSQNPNILGR
GQHCFSAYGRPTYPAAVNRYSLPNEYSPGVVHAQEYWSDPFQVAPQSRSGSLQDHRMPQH
ITGPVSNDQHQWPQPHGNYDKDREEVRKKLLAIFNPYQVDKVMSIFPYLLDPQRLAAEIL
TLKSQGGCF
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccttaaacagcttcccgtctgcaactagacattccaaaggctcccacgccatc
accaggatggacagaggcgtccactatccctccagggaggagaagcagggcagtccagat
gtggcacacctggaagccagcgagtttcagatgcaggtggacttcttccgcaagctgggc
tactcggttgatgaggtggtggcggttctccacaagctaggcgtcaacgccgacaccaat
acggtgctgggtgagctggtcaggtgtggggccacagcttcagaaagggaaggggtcact
ggatcccccactggccccgtcttagtttctcgagggggcagctcagccagaaccccctcc
agcctatcagcctccccaccgccaccccccgaagaggacgaggaggagggtggtcacttg
aaaccgatcgtgatcgacggaagcaatgttgccatgagccatggaaataaggaagtgttt
tcctgccgggggattcagctcgcagtgaactattttctggagcggggccacagcgacatt
acagtatttgtgccttcgtggagaaaagaacagcccaggcctgatgtacccataacagac
cagcacatcttgcgagacctggagcggaagaagattgtggtgttcacgccctcccgccgg
gtgggggggaagcgggtggtctgttacgacgaccgcttcatcgtcaagctggctcacgag
tccgacggcatcatcgtgtccaacgacacctaccgcgacctgcagagcgagcggcccgag
tggaggcgcttcatagaggagcgcctgctgatgtattccttcgtcaacgacaaatttatg
cctcctgatgatccacttggacgccatggtcccagcttggataatttcctcaggaagaaa
cccctggtccaggaattaaaacgacagcactgtccatatgggaaaaagtgcacatatgga
atcaaatgtaagttctatcacccggagcggatcaaccagacccagcgttcagtggcggat
gaactccgggagaatgctaagctatcagctgtgagggctgggactcctgccagctccctg
aaggatgacaagaagcccgccttgtcccacaaatccccgcatccggaacacagctccgtg
ttttctctggaacaggatatcgaacagaagctgacacttgatcgacgcaactctttaagg
aagggtcatgtgactgaaaacgtggttgtgctcagaggaatgccctcaggcagaaagcct
tccaaaaagatcccctttagccaatcagaatggtccagccatccatctgctaccaatatg
gactcctttgtctttaactctcaagagcatctggattcaggcctgggatcttatgagagc
cagtattctgaaatgtccagaggtcaggcatgtcattccgagtcttatgtgaccgaacaa
agagcaccctgctgctgtctcggcaacaggcaagtctatttgcactctaacaacccagag
aggcatgacagctaccagcagtacagctgctgctctcataaagcaatgtcagctggtgca
aatctccagccattcaatcaggatttgtccagctcccaaaatcccaatattctcggacgt
ggccagcactgcttttcagcttatgggaggcctacatacccagctgctgtaaatcgctat
agcctcccgaatgagtacagcccaggtgttgtccatgctcaggaatactggtccgatcca
ttccaagtagctccacagtctagatcgggcagccttcaggaccacagaatgcctcaacac
ataacaggtccagtatctaatgaccagcaccagtggcctcagcctcatggtaactatgac
aaggacagggaggaggtccgtaagaagctgcttgccatctttaacccctatcaagtagac
aaagttatgagcatattcccttacctgctggatccccagagacttgctgctgaaatatta
accctcaagtcacagggtggatgtttttga
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