KEGG   Lepisosteus oculatus (spotted gar): 102694546
Entry
102694546         CDS       T07349                                 
Symbol
zc3h12a
Name
(RefSeq) ribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
loc  Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:loc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:loc03019]
    102694546 (zc3h12a)
Messenger RNA biogenesis [BR:loc03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     102694546 (zc3h12a)
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_2 UBA_N4BP1 zf-CCCH UBA_3 zf-CCCH_4
Other DBs
NCBI-GeneID: 102694546
NCBI-ProteinID: XP_015204339
Ensembl: ENSLOCG00000003232
LinkDB
Position
LG6:5391097..5402479
AA seq 669 aa
MLSLNSFPSATRHSKGSHAITRMDRGVHYPSREEKQGSPDVAHLEASEFQMQVDFFRKLG
YSVDEVVAVLHKLGVNADTNTVLGELVRCGATASEREGVTGSPTGPVLVSRGGSSARTPS
SLSASPPPPPEEDEEEGGHLKPIVIDGSNVAMSHGNKEVFSCRGIQLAVNYFLERGHSDI
TVFVPSWRKEQPRPDVPITDQHILRDLERKKIVVFTPSRRVGGKRVVCYDDRFIVKLAHE
SDGIIVSNDTYRDLQSERPEWRRFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKK
PLVQELKRQHCPYGKKCTYGIKCKFYHPERINQTQRSVADELRENAKLSAVRAGTPASSL
KDDKKPALSHKSPHPEHSSVFSLEQDIEQKLTLDRRNSLRKGHVTENVVVLRGMPSGRKP
SKKIPFSQSEWSSHPSATNMDSFVFNSQEHLDSGLGSYESQYSEMSRGQACHSESYVTEQ
RAPCCCLGNRQVYLHSNNPERHDSYQQYSCCSHKAMSAGANLQPFNQDLSSSQNPNILGR
GQHCFSAYGRPTYPAAVNRYSLPNEYSPGVVHAQEYWSDPFQVAPQSRSGSLQDHRMPQH
ITGPVSNDQHQWPQPHGNYDKDREEVRKKLLAIFNPYQVDKVMSIFPYLLDPQRLAAEIL
TLKSQGGCF
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgctgtccttaaacagcttcccgtctgcaactagacattccaaaggctcccacgccatc
accaggatggacagaggcgtccactatccctccagggaggagaagcagggcagtccagat
gtggcacacctggaagccagcgagtttcagatgcaggtggacttcttccgcaagctgggc
tactcggttgatgaggtggtggcggttctccacaagctaggcgtcaacgccgacaccaat
acggtgctgggtgagctggtcaggtgtggggccacagcttcagaaagggaaggggtcact
ggatcccccactggccccgtcttagtttctcgagggggcagctcagccagaaccccctcc
agcctatcagcctccccaccgccaccccccgaagaggacgaggaggagggtggtcacttg
aaaccgatcgtgatcgacggaagcaatgttgccatgagccatggaaataaggaagtgttt
tcctgccgggggattcagctcgcagtgaactattttctggagcggggccacagcgacatt
acagtatttgtgccttcgtggagaaaagaacagcccaggcctgatgtacccataacagac
cagcacatcttgcgagacctggagcggaagaagattgtggtgttcacgccctcccgccgg
gtgggggggaagcgggtggtctgttacgacgaccgcttcatcgtcaagctggctcacgag
tccgacggcatcatcgtgtccaacgacacctaccgcgacctgcagagcgagcggcccgag
tggaggcgcttcatagaggagcgcctgctgatgtattccttcgtcaacgacaaatttatg
cctcctgatgatccacttggacgccatggtcccagcttggataatttcctcaggaagaaa
cccctggtccaggaattaaaacgacagcactgtccatatgggaaaaagtgcacatatgga
atcaaatgtaagttctatcacccggagcggatcaaccagacccagcgttcagtggcggat
gaactccgggagaatgctaagctatcagctgtgagggctgggactcctgccagctccctg
aaggatgacaagaagcccgccttgtcccacaaatccccgcatccggaacacagctccgtg
ttttctctggaacaggatatcgaacagaagctgacacttgatcgacgcaactctttaagg
aagggtcatgtgactgaaaacgtggttgtgctcagaggaatgccctcaggcagaaagcct
tccaaaaagatcccctttagccaatcagaatggtccagccatccatctgctaccaatatg
gactcctttgtctttaactctcaagagcatctggattcaggcctgggatcttatgagagc
cagtattctgaaatgtccagaggtcaggcatgtcattccgagtcttatgtgaccgaacaa
agagcaccctgctgctgtctcggcaacaggcaagtctatttgcactctaacaacccagag
aggcatgacagctaccagcagtacagctgctgctctcataaagcaatgtcagctggtgca
aatctccagccattcaatcaggatttgtccagctcccaaaatcccaatattctcggacgt
ggccagcactgcttttcagcttatgggaggcctacatacccagctgctgtaaatcgctat
agcctcccgaatgagtacagcccaggtgttgtccatgctcaggaatactggtccgatcca
ttccaagtagctccacagtctagatcgggcagccttcaggaccacagaatgcctcaacac
ataacaggtccagtatctaatgaccagcaccagtggcctcagcctcatggtaactatgac
aaggacagggaggaggtccgtaagaagctgcttgccatctttaacccctatcaagtagac
aaagttatgagcatattcccttacctgctggatccccagagacttgctgctgaaatatta
accctcaagtcacagggtggatgtttttga

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