Lepisosteus oculatus (spotted gar): 102694660
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Entry
102694660 CDS
T07349
Symbol
gen1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
loc03400
]
102694660 (gen1)
DNA repair and recombination proteins [BR:
loc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102694660 (gen1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
102694660
NCBI-ProteinID:
XP_015213304
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All DBs
Position
LG1:64888123..64900143
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AA seq
978 aa
AA seq
DB search
MGVNELWPILEPVRESVPLYSLSGKTLAVDLSLWVCEAQFVKEMMGKVTKPYLRNLFFRV
MSLTLMGIKLIFVVEGEAPKLKAETMNKRNEMRFGPLKKPASKPGKTGRSHFKSVLKECS
QMLDCLGIPWVTAAGEAEALCAYLDANGQVDGCITNDGDAFLYGAQTVYRNFNMNTKDPQ
LDCYKMEKIQSILGLERETLVGFAILLGCDYLPKGIPGVGKEMTLKLIETLKGETLLQKF
SQWKEQTQDLDVQRRAVKKVTHCQICCHPGSAKTHERNGCKLCNSKRFCEPRGYDYSCPC
DWHQTERGRQASAAEFNIKKKALACEGFPFSEIIKEFLISKDKLTKNLKYRKPNLFAMRK
FALDKMEWPEHYTSEKVVVLITYTEMMNRKCGKESASQIEPIRIFKSRVRNGVACYEIIW
KKPEHFIYAEDHPVESLDTVKTVEEVSLFQSAYPETVDMFLKERAEAEENKNKNKKKRPK
GQKSGDTDEVSSLFAQMSIHSSSQERAEVAAIATARIPAVVPIDHEGSEATPDCQVLHIF
AHTTTSQLEELCEHHTNLHGPEKPQTEDAGRALSPVSPDKASLASFSHSASAVIDVLHLS
DIDWAATSFGASPPPQLQNAASEPNNVTPQKGVNCNGESTGESGDFSSCNKVIKPTVLHC
ERFSNQGTKLPVSELSLRERVIMKNFSQSNNSHIQHAAGDNVRHKAQPKYLIPAGHNTMF
QKPITSPTNAIKKTIQTAKEQICAENTLLNYHQKSFSKQNTISSLPKADMPLTNQKAVSR
IKQCAKNSNKSLEKKQFLKTSSITKPSSGVQRLSSTNVADQPVHKGRKKNVFKKSECHVL
YSSSEDSDLENKILKGHKKVVLSKPEQKYTSVSNKIRKPAKTEGNSASLRADFHTADLVS
QTASVEQNKNNHAEMKAKKQIIVDNEEIIIGDQSCTFDLNSQSPKALSHTCDNVADDSVI
LLDSPLPLAERLKLKFSS
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgggcgttaatgagttatggccgatcctggagccagtgagagaatctgtgcccctctac
agtcttagtgggaagaccttggctgtggatttaagcctgtgggtttgtgaggctcagttt
gtaaaagagatgatggggaaagttactaaaccttatctcagaaatttatttttccgagtt
atgtctctaacgcttatgggaataaagctgatttttgtggtggaaggagaagcgccaaaa
ctgaaagctgagactatgaacaagagaaatgagatgagatttggacccttaaagaagcct
gcatctaaaccaggaaaaactggaaggtcccatttcaagtctgtacttaaagagtgctca
cagatgctcgactgtctcggcattccttgggtcacggcagcgggagaggctgaagctctg
tgtgcctacctggatgccaacggccaggtggatggatgtattacaaacgatggggatgcc
ttcctttacggagctcagacggtttacagaaactttaacatgaacaccaaggatcctcaa
ctcgactgctataaaatggaaaagattcagtctatcctgggactggaacgggaaaccctg
gtgggttttgcaatcctgctcggttgtgattatcttccaaagggaataccaggagttgga
aaagaaatgactttaaaacttatagagacattaaagggagaaacactccttcagaagttc
agccaatggaaggaacagactcaggatctggacgttcagagaagagctgttaaaaaagta
acgcattgtcaaatctgctgtcacccaggatctgccaagacacacgagaggaacggatgc
aagttgtgcaacagcaaacggttctgtgagccccggggatacgactactcctgcccctgt
gactggcatcagacagaacgaggaaggcaggctagtgcagcagagttcaacatcaaaaaa
aaagccctagcatgtgaaggattccctttttcagagataatcaaggaatttctgatatcc
aaggacaaacttactaaaaacctcaagtacagaaaaccaaatctttttgcaatgcggaaa
tttgctctggacaaaatggagtggcctgaacactatacaagtgagaaggtggttgtgttg
atcacatatacagaaatgatgaacagaaaatgtgggaaagagagtgcttcacagatagag
ccaataaggatattcaagtcaagagtcagaaatggagttgcttgctatgagattatctgg
aagaaaccagagcactttatttatgcagaagatcatcctgtagaatctctggacacagtc
aaaacagttgaggaggtatctctgttccagtcagcctacccagagaccgttgacatgttt
ttgaaggagagggctgaggctgaggaaaacaagaacaaaaataaaaagaaaaggccaaaa
gggcagaagtcaggggatactgatgaagtttcaagcctctttgcccaaatgagcatccat
agttcttctcaagaaagagcagaagtggctgccattgccacagctcgaatccctgcagtt
gttcccatagaccacgaaggcagtgaggcgacaccagattgtcaagttctccacattttc
gcccacacaactacgagccagctggaagagttgtgtgagcaccacacaaatctgcatggc
ccagagaagccacagactgaagatgctggtcgtgctctgtctcctgtttcgccagataag
gccagtctagcctcattctcccattcggcatctgcagtaatagatgtgctgcatctgagt
gacattgactgggcagcaacatcctttggtgcatctccacctccacaactgcaaaacgca
gcatctgaaccaaataatgttacacctcaaaaaggtgtcaactgcaatggcgagagcact
ggcgaatctggtgatttcagttcctgtaataaagtaataaaacccacagttttgcattgc
gagagattttcaaatcaagggacaaagctgcccgtttcagagctttctttaagagagcgt
gttattatgaagaactttagtcagtccaataactctcatattcagcatgcagctggtgac
aacgtaaggcacaaagctcagccaaaatacctgattcccgcagggcacaatactatgttc
cagaaaccaataacatcacccacgaatgccatcaaaaagactatacagacagcaaaagaa
cagatttgtgctgaaaacacattgctgaattatcatcagaaatcttttagtaagcagaat
acaatctcttctcttccaaaagcagacatgcctctcacaaatcagaaggcagtcagtaga
attaagcaatgtgcaaagaactctaataagtcattggaaaaaaaacagtttcttaagact
agcagcataactaaaccttccagtggagtacagaggctaagtagcaccaatgtagccgac
cagcctgttcacaaaggcagaaagaaaaatgtctttaaaaagagtgaatgccatgtactg
tattcatctagcgaggacagcgatttagagaataaaatactcaaaggccataaaaaggtg
gttctttctaaacctgaacagaagtacacatccgtcagtaataaaatccgaaagccagcc
aagacagaaggcaattcggcttctctgagagcagacttccatactgcagatcttgtatca
cagacagcttctgtggagcaaaataaaaataatcatgcagaaatgaaagcgaagaaacaa
ataattgttgataatgaagaaattataataggggaccagagttgcacttttgaccttaat
tctcagagtcctaaagctctttctcacacatgtgataatgtagcagatgattctgttatt
ttattagacagcccgctgcctctagctgaaaggctgaagctcaagttcagtagctaa
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