Lepisosteus oculatus (spotted gar): 102694666
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Entry
102694666 CDS
T07349
Symbol
pdgfd
Name
(RefSeq) platelet-derived growth factor D isoform X1
KO
K05450
platelet derived growth factor C/D
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04010
MAPK signaling pathway
loc04020
Calcium signaling pathway
loc04510
Focal adhesion
loc04540
Gap junction
loc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102694666 (pdgfd)
04020 Calcium signaling pathway
102694666 (pdgfd)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102694666 (pdgfd)
04540 Gap junction
102694666 (pdgfd)
09142 Cell motility
04810 Regulation of actin cytoskeleton
102694666 (pdgfd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
loc04052
]
102694666 (pdgfd)
Cytokines and neuropeptides [BR:
loc04052
]
Cytokines
Growth factors (RTK binding)
102694666 (pdgfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
HTH_Tnp_IS630
Motif
Other DBs
NCBI-GeneID:
102694666
NCBI-ProteinID:
XP_006627888
Ensembl:
ENSLOCG00000007018
LinkDB
All DBs
Position
LG3:10496303..10546382
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AA seq
368 aa
AA seq
DB search
MQLLLLFLIVLVNCCHQGSEAQGGSIKTLRSSNIRREDSNHLTDLYRKEETIVVSENGHI
QSPRYPNSYPRNLLLTWKILSPENTRILLDFDRHFGLEEPENDICRYDFVEIEDLSETST
IIRGRWCGHKETPPRITSKTNTIKITFKSDDYFVAKPGFKLYYSLMDDVQPAASETNWEA
VTNSVPGPSVFSSSVTDSPLSAAALDQTIAAFDTVEELLKHLNPDTWQEDLENLYTDTGH
YRARTFHHERRHKIDLDRLNEDVKRYSCTPRNYSVNLREELKATNAVFFPRCLLVQRCGG
NCACGTENWRSCTCSPGKTSEKLYEVLKFSPEPGFFRRKSRGRGMGLAEIYLEHHERCDC
VCHSRPPR
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgttactgcttttcctaatagttctcgtgaactgttgccatcaaggcagtgaa
gcccagggtggatctataaaaactttacgatcttcaaatataaggcgtgaagacagcaat
cacctcacagacttgtaccggaaagaagaaaccatcgtggtgtccgagaatggccacatt
cagagtccgcgctaccctaacagctatccaagaaaccttctgttgacctggaaaatcctt
tctccggaaaacactcggatacttctagactttgacagacattttggcctggaagaacca
gaaaatgacatctgtagatatgattttgtggaaattgaggatttatcagagaccagcaca
attatacggggaagatggtgtggacataaggaaacccctccaaggataacgtcaaaaaca
aatacaattaaaatcacctttaaatctgatgattattttgtggccaaaccaggattcaaa
ctgtattactctctcatggatgatgtccaacctgcagcatccgaaacaaattgggaagca
gtcaccaactctgtcccaggaccatctgtgttttcctcatcagtgaccgattccccattg
tcggctgcagctttggaccagaccatcgctgcgttcgacacagtggaggagctgctgaag
cacctcaatcccgacacgtggcaggaggacctggagaacctttacaccgacactggtcat
taccgagcccggacctttcaccacgagcgcaggcacaagattgacctggacaggctgaat
gaggatgtaaaacgatacagctgcacacctaggaactattcggtcaatctgagggaagag
ctgaaggcaaccaatgcggttttctttccccggtgtctcctcgttcagcggtgtggggga
aactgtgcctgtggtacggaaaactggcgttcctgcacctgctcgcctggcaaaactagt
gagaagctttatgaggtgctgaaattcagtcccgaacctggattcttcagaaggaaaagt
cgaggaaggggtatgggcctcgcagaaatctacctggagcaccatgagcgttgtgactgt
gtttgccactcacggccaccacgatga
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