Lepisosteus oculatus (spotted gar): 102694672
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Entry
102694672 CDS
T07349
Symbol
lrrc49
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
loc03037
]
102694672 (lrrc49)
04812 Cytoskeleton proteins [BR:
loc04812
]
102694672 (lrrc49)
Cilium and associated proteins [BR:
loc03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
102694672 (lrrc49)
Cytoskeleton proteins [BR:
loc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
102694672 (lrrc49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_9
LRR_8
LRR_14
LRR_NXF1-5
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
102694672
NCBI-ProteinID:
XP_015198851
Ensembl:
ENSLOCG00000014584
UniProt:
W5NBE3
LinkDB
All DBs
Position
LG3:complement(51499805..51609342)
Genome browser
AA seq
817 aa
AA seq
DB search
MLPNKYQYTRGRFLAPTVNSYNLQLGTLSTAAPERVSFQKPLDFRLAKDLPGLSREVAPD
SLRINATRQGGRLISAQNAGRPSQPPALAFGMEFTGQDRVLCQLSAGTPRGHSGDSVTPA
HRPWSRQASHSAGASSSHSCPLDTPMAGKKLEGDAAVLLENASAPGVPVAFRSREDHAAS
PERLDLDGRHLQVCPLLEGEERLRLLNFQHNQISRIQQLSHLRRLIFLDLYDNRIGEISG
LSALTSLRVLMLGKNRITRISNLENLTKLDVLDLHGNQISKLENLSHLAELRVLNLAGNC
IACVENLRGLDSLTELNLRRNCITTVTDVDCLPCLQRLFLSCNNITSFDDLTCLGDSRSL
SEVTLDGNPVAQETWYKQTALRYMVQLRQLDMKRITEEERRMASVLARKEDEKKRESHKQ
AVHKEKRRLAIRNAAQQWEAQAVKHGFKACLELPAQDCVKQEVSPEHSPGQLNGIAPHVS
QEELRRLSPAASGEKAAGGGDSRTRTPSRPNSPRDPRLAEATVGAGVQSLSLSDSHLAEL
DGDTLRLFGPGALEALERGWGVQTAGAVTAIAFRYIDFDTIVPTLPRIRVKFPNVRHLIF
SNSNISRLPQLAALAQVRRLDQLTVHPEGNPVVSLGLWRSFAIYRLNHFNLQRINGLEVT
MNDVITAERLFGTLGHIAATETPHYRLLLLLEESRKRQLQFLLEGRGRRAGLSPEELRDN
GKALGEGLSRALFNYPSRDTGADSTEEAFSDGPVKTQVCREFVSGLVKRAADTNLKAESL
HKLWPSLFVELVRDSVLDMWGRPAYRQACLQRISQPQ
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccaataaataccaatacaccagaggacgattccttgctccaacggtaaacagc
tataatttgcagctggggaccctgagcactgctgcgccagaacgagtgtcgtttcagaag
ccgcttgactttcgcctggctaaagacctgcctggcctcagtagagaggtagctccagac
agcttgaggattaatgcaaccagacaaggcgggaggctcatcagcgctcagaatgctgga
agaccctcccagcctcctgcgctggcctttggcatggagtttacggggcaggacagggtg
ctgtgccagctgtctgcaggcactcctcgggggcatagtggtgacagtgtgacaccagcc
cacaggccctggtctaggcaagcttcccacagcgcgggggcgagctcctcccacagctgc
cctctagacaccccgatggctggcaagaagctggaaggcgatgcagcagtgcttttggag
aacgcctcagcccctggggtccccgtggccttccgctcccgggaggaccatgcagccagc
ccggagcgcctggatctggatgggcgccatttacaggtctgccccctgctggaaggggaa
gagaggctccggctgctcaacttccagcacaatcagatctcacgcatccagcagctgtcc
cacctgcgccgcctcatcttcctggacctgtacgacaaccgcattggggagatctccggg
ctctcggctctcacttccctgcgtgtgctcatgctgggcaagaacagaataacaagaatc
agcaatttagaaaacctgacaaaactggatgtgttggatctgcatggtaatcagatctcg
aaacttgagaacctctctcatctggctgagttgcgtgtgttgaacctcgctggaaactgc
attgcctgtgtggagaacttgaggggtctggactctctgactgaactcaatctgagacgt
aattgtatcacgaccgtgacagatgtcgactgcctgccctgtctgcagcgcctcttcctc
agctgcaacaacatcaccagtttcgatgatcttacttgccttggagacagccgctccttg
tctgaggtcacactggatggaaaccctgtagcccaggagacatggtacaagcaaactgcc
ctgcgctacatggttcaactgaggcagctggacatgaagcgaatcacagaagaagagcgc
cgcatggcatctgtcttagcaaggaaggaggacgaaaagaaaagagaaagtcacaagcaa
gctgttcacaaggagaagcgtcgcctagcgatccggaatgcagctcagcagtgggaagct
caggcggtgaaacatggatttaaggcctgtctggagctcccagctcaggattgcgtgaag
caggaggtcagccctgagcacagccctgggcagctcaatggcatcgctccccatgtctct
caggaggaacttaggcggctgagtcccgcggcttctggtgagaaggcagccgggggcggc
gacagcaggacccgcactcccagccggcccaacagcccccgggaccccaggctcgccgaa
gccacagtcggtgcgggggtgcagagcctctccctctctgactcccacctggcggagctg
gacggggacacgctgaggctcttcggacccggggcgctggaggccctggagcgtggctgg
ggggtgcagaccgctggcgccgtcacggccatcgccttccgctacatcgacttcgacacc
atcgtgcccaccctgccgcggatccgtgtcaagtttcccaacgtcaggcacttgatcttc
tcaaacagcaacattagccggctgcctcagctggccgcgctggcccaggtcaggaggctg
gaccagctgactgtccaccccgaaggcaatccggtggtcagcctggggctctggaggtcc
tttgccatctaccggctcaaccacttcaacctacagaggatcaatggcctggaggtgacc
atgaatgatgttataacagcagagaggctgtttggtaccttgggccacattgcagcgact
gagactccacactatcgcctgcttctgctccttgaagaatccaggaagcggcagctgcag
tttctgctggaggggcgcgggcggcgggcgggcctgagcccggaggagttgcgggacaac
ggcaaggcgctgggcgaggggctgagcagggccctcttcaactaccccagccgggacacg
ggggccgacagcactgaggaagccttttccgatggcccggtgaagacccaggtgtgccgg
gaattcgtgagcggtctggtgaaacgggccgccgacaccaacctgaaagcagagtccctg
cacaagctgtggccctcgctgttcgtggagctggtcagggacagcgtgctggacatgtgg
ggccggccggcgtaccgccaagcgtgcttgcagaggatttcacagccccagtga
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