Lepisosteus oculatus (spotted gar): 102694697
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Entry
102694697 CDS
T07349
Symbol
tbl3
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102694697 (tbl3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
loc03009
]
102694697 (tbl3)
Ribosome biogenesis [BR:
loc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
102694697 (tbl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Utp13
Beta-prop_WDR36-Utp21_1st
EIF3I
WDR55
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_HPS5
WD40_RFWD3
WD_LRWD1
Beta-prop_WDR35_TULP_N
Ge1_WD40
Beta-prop_Nup120_160
Beta-prop_pof12
Cytochrom_D1
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
102694697
NCBI-ProteinID:
XP_006637433
Ensembl:
ENSLOCG00000008853
UniProt:
W5MQX2
LinkDB
All DBs
Position
LG13:complement(16218135..16234337)
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AA seq
976 aa
AA seq
DB search
MATSTLQLKTNYAVLDKIEPFYKGGKVQISTDENYIFCTCGTRVNVLEIATGKVIQRIEQ
DDQEDITSFTLSPDDEVLVTASRALLLKQWDWRESRCVRTWRAIHTSPVASMTFDPTSTL
LATGGCDGTIKLWDVVKQYCTHNLKGSPGVVHLVQFHPDSALLQLFSSSMDCRIRVWDLR
TSQCLCVLESHYSAVTSLAFTPDGSTLVSSGRDKICTVWDLKSKTPTRTVPVFEAVEAVV
LLPQGADVSRIGVKNEGLHFITAGSRGVLRVWEASSGRCIFTQTLPTGHPTGKAESDDGD
EHSFTCCHPLPSSSRVAAVTAEHNFLLYDLPSLTLQQQFVGYSDDILDVKFLGPEDSHIV
VATNSPQLKVFELASSSCQILYGHTDTVLSLDVFRKGCMFASCAKDNSIRVWRLSPATGQ
VCCVAQGLGHVNAVGSISCSRMKESFVASGSQDYTVKVWELPESLRSKEGGGVEALTARV
TEKGHDKDVNSVAVSPNDKLLASGSQDRTTKLWALADLSLLGVFRGHRRGVWCVQFSPVD
QVLATSSADGSVKLWGLQDFSCLKTFEGHDASVLKVIFVNRGTQLLSSGSDGLVKLWTIK
TNECVKTLEAHQDKVWGLHSSRKDDLMVTGSADSCITIWKDVTDAELEEEQAKQEDQILK
QQELSNLLHEKKYLRALGLAISLNQPHTVLRVIKEIRGEEEGQEQLDRTVLKLRQDQKEA
LLGYCVVWNTNARNCQEAQAVIQALLRHLSPEQLLQCKGLRSALEGLLPYTERHFQRIGR
LLQASMFLDYMWQHMRVTGQDSVAVQDEEMDRGLPLFVVDKQPSYSQAVMEEEESTEDTM
GEEEDGASVDHGVGSAKKASMGTVGVSRGAKDAQEEEEEDPEEVEDDDSDVSAANKARVG
GADGARQPEDSEEEEEEKEEEQKENVQPSPASEEEEEEGEEEQQRVRRDRRPRKCKTGEV
DTRPAPRQTRASRRRR
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atggctaccagcaccttacaacttaaaaccaactatgctgttttggacaaaatcgaaccg
ttttataaaggaggcaaagtgcagatcagtaccgatgagaattacattttttgcacctgt
gggacaagagttaatgtcctggagattgccacagggaaagtcatccagagaattgagcag
gatgaccaggaagacattacttctttcaccttaagccctgatgacgaggtgcttgtgacg
gcgagccgcgctctgctgctgaagcagtgggactggagggagagccgctgcgtgcgcacc
tggagggccatccacaccagccctgtggccagcatgaccttcgaccccacgtccacactc
ctggccacagggggctgtgatggcaccatcaaactgtgggacgtggtgaagcagtactgc
acccacaacctcaagggttctcctggagtcgtacacctggtgcagttccaccctgacagc
gctcttctgcagctcttctcctcctccatggactgtaggatccgcgtgtgggacctgcgc
accagccagtgcctgtgtgtgctggagagccactacagtgcagtgacctcgctcgccttc
acccctgacggcagcacactcgtcagctcggggcgtgacaagatctgcacggtctgggac
ctgaaatccaagactcccactagaactgtgccggtgtttgaggcagtggaggccgtggtg
ttgctgccccagggagctgatgtctccaggataggggtcaagaatgaagggctgcacttc
attactgcaggaagcagaggtgtgttgcgggtgtgggaggcgagctctgggcgctgcatc
ttcacccagacgctgcccaccgggcacccgacggggaaggcagaaagcgatgatggtgac
gagcacagcttcacctgctgccatccgctgccctcttcctcccgcgtcgctgcggtgacc
gctgagcacaacttcctgctgtacgacctgccatctctgactctgcagcagcagtttgtg
ggatacagtgatgatattctggatgtaaagttcctgggcccagaggactctcacatcgtt
gtggcaacaaacagccctcagctgaaggtgtttgagctggcctcttccagctgccagatc
ttgtacggacacacagacactgtgttgtcgttggatgtgttccgaaaaggttgcatgttt
gcgagttgtgcaaaggacaactccatcagggtgtggcggctgagcccggcgacggggcag
gtgtgctgtgtggcacaaggccttgggcacgtcaacgccgtggggagtatctcctgctca
aggatgaaggagagctttgtggcgtctggctctcaggactacacggtcaaggtgtgggag
ctcccagaatccctgcggtctaaggaaggtggtggagtggaggccctgaccgcacgagtc
acagagaaggggcacgacaaggatgtgaacagtgttgcagtctcccccaatgacaagctg
ctggcctcgggctcccaagaccgcacgaccaagctgtgggccctggcggacctgtccctg
ctgggggtgttccgcggccaccgcagaggggtgtggtgtgtgcagttctcgcctgtggac
caggtcctggccacctcctccgcagacggctccgtcaagctctggggcctgcaggacttc
agctgcctcaagacgtttgaaggtcacgacgcctcagtgttgaaggtcatcttcgtgaac
cgtggaacacaactgctgtcaagcggctctgacgggctcgtgaagctctggaccatcaag
accaacgagtgcgtcaagacgttggaagcccaccaggacaaggtgtggggtctccacagc
agccggaaggatgacctgatggtgacgggctcggccgactcctgcatcacgatctggaag
gacgtcacagacgctgaactagaagaggagcaggccaagcaggaggatcagatattgaaa
cagcaggagctctccaacttgctccacgagaagaaatacctacgagccctgggcttggcc
atctctctcaatcagccccacactgtgctgcgtgtcattaaagagattcgtggagaggaa
gagggacaagagcagctggacagaaccgtgctgaagctgcgtcaggaccagaaagaggcc
ctgctgggctactgcgtggtatggaacaccaacgcccggaactgccaggaggcccaggcg
gtgatccaggcgctgctgagacacctgagccccgagcagctcctgcagtgcaaggggctc
cgcagcgcactggagggactcctgccctacacagagcggcacttccagaggattgggcgt
ctgcttcaggcctccatgtttttggactacatgtggcagcacatgcgtgtgaccggccag
gacagcgtggcagtgcaggacgaggagatggacagaggccttcctctcttcgttgtcgac
aagcagccaagctacagccaggcggtgatggaagaggaggagagcactgaggacaccatg
ggagaggaagaggatggtgcctcagttgaccacggcgtcggctctgccaagaaagccagc
atggggactgtcggcgtctctcgaggcgcaaaggacgcccaggaggaagaagaggaggac
cccgaggaggtggaagatgacgacagcgacgtcagcgccgctaacaaagcaagggtggga
ggtgctgatggcgcacgccagccagaggacagtgaggaggaagaggaggagaaggaggaa
gagcagaaagagaatgtccagccatcccctgccagtgaggaggaggaggaggagggggag
gaagagcagcagcgtgtgaggagggacaggagacccaggaagtgcaagaccggtgaggtg
gacactcggccagcccctcgtcagaccagggcctccagacggaggaggtga
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