Lepisosteus oculatus (spotted gar): 102694734
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Entry
102694734 CDS
T07349
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102694734 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102694734 (herc3)
Enzymes [BR:
loc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102694734 (herc3)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
HECT type E3
102694734 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
102694734
NCBI-ProteinID:
XP_015200074
Ensembl:
ENSLOCG00000009178
UniProt:
W5MS50
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All DBs
Position
LG4:complement(25465456..25512150)
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AA seq
1079 aa
AA seq
DB search
MMLCWGNTAAGQLGLGDLETTVYEPRSCKVFSSRGLKEIACGGQHSVFLLHDGSLYSCGS
NSWGQLGHEKGGGRPELVGALDAQKIAAVCCGEAHSLAVNEQGQVFSWGAGNEGQLGLGT
AEETVRVPRLIKKLCEHRITQVMCGSKHCLALSKDGQIFAWGQNSNGQLGLGKGEPSKLS
PQPLKSLSGIPLAQIAAGGDHSFAVSLSGAVFGWGRNSAGQLGLNDEQERAVPCHIKSLR
TQKVVYISCGDEHTAALTKDGGLFTFGDGSQGQLGHDSTNNEVVPRRVLELMGSEVSQIA
CGRQHTLAFVPSSGVVYAFGCNTKGQLGVGCRGNAKSPIPVKSSIFYHRESLHSPGSENA
HRNFPSRLREICSTFCLCCWSRSSHEKSEGCFIRQIHCGGDHSFLLCSSCESPVAPEDFR
VLNSRKSISVINSENLNTWRIKLIENSDSSTVNDIILLLSSTACWNASFLDQSDDGHFKT
NPKIPGIDLSSVRLLFQTLMKPSFSRLLEQATKSFESLLIPQLPCSPPDVEAMRIYLILA
ECPVLQDSKYYISLTVPLAMAILRLDTNPSKVLDNWWTLLDCAVFSRLIELYKSTVVFLL
TGGKALLIPVFLESYINAALKLLEKLHKVNLKAQHVDYNHFYIPDITSLVDIQEEYLKWF
LSKAEIKIRSPPLQTSVTLCAYPFILNAQAKTTMLQTDAELQMQMAVSGANLHNMFMLLT
LEPLLARNPFLVLHVRRDNLVSDALRELSIYSDIDLKKPLKVIFDGEEAVDAGGVTKEFF
LLLLKELLDPVYGMFTHYEESNLLWFSDKCFVELNWFHLIGITCGLAIYNSTVVDLHFPL
ALYKKLLDVPPSLEDLKELSPTEGRSLQQLLDYQGDDVEESFCLNFAITRENYGLTEVKE
LVQEGENITVNKDNREEFVQAYLNYVFNDSVKELYTAFSSGFLKVCGGKVLSLFQPSELM
AMVVGNNNYNWEEMEKNAVYKGEYSATHPTVKMFWEVFHEFPLEKKKQFLLFLTGSDRIP
IYGMESLRVVIQSTSAEEHYLPVAHTCYNLLDMPRYKTKEILRKRLTQAIEQYEGFSLV
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtgctggggcaacacggctgcaggccagcttggcctaggtgacttggaaacc
actgtgtacgagccacggagctgcaaggtgtttagcagtaggggactgaaggagattgcc
tgcggaggacaacattcagttttcctgttgcatgatgggagtttgtattcctgtggctct
aacagctggggccagctgggccatgaaaaaggaggaggcagacctgagctggttggagcc
ctagatgctcagaagattgcagcggtgtgctgtggggaagctcactctctggcagtcaat
gagcaaggccaggtcttctcctggggggcagggaatgaggggcagttgggtcttggcact
gctgaggaaactgtcagagttccgaggttgatcaaaaaattgtgtgaacaccgaattact
caagtcatgtgtggcagtaagcactgcttagccctttctaaagatggacagatttttgcg
tggggacagaactcaaatgggcagctgggcttggggaaaggagagcccagtaagctttct
ccccagcccctcaagtcgctctccggcattcctctggctcagatcgctgcagggggagac
cacagctttgcagtctcgctctcgggggctgtgtttggctgggggaggaacagcgcagga
cagctggggctcaatgatgagcaagaacgtgcagttccttgccatatcaagtctttaaga
acacagaaagtagtttacatcagctgtggagatgagcatacagcagccctgacaaaggat
ggtggtctgtttacatttggagatggctcacaggggcagctgggacatgattctacaaac
aatgaagtagttccaagaagagttcttgaactgatgggaagtgaagtatctcagattgcc
tgtggcagacagcacaccctagcatttgtgccttcctcgggtgtggtctatgcttttggc
tgcaacaccaaaggacaactgggagttggctgcagggggaatgctaaaagcccaatacct
gtaaagagcagcattttttaccacagagaaagccttcactcaccaggcagtgagaatgca
cacaggaattttccaagcaggttgagggaaatctgcagcacattttgcttatgttgctgg
agccgctcatctcatgaaaaatcagaaggttgcttcattagacaaattcattgtggtgga
gatcatagctttttgttgtgctccagttgtgagtcgcctgttgcccctgaagacttccgt
gttcttaattccagaaaaagtatctcagtcattaacagtgaaaatttaaacacttggcga
ataaaacttatagagaacagtgattccagcactgttaatgatataatccttctcctttct
tccactgcttgttggaatgcaagtttcctagaccaaagtgatgatggacactttaaaacc
aatcctaaaattcctgggatcgacttgagttctgtcaggttgttatttcaaactctcatg
aagccttcattttccaggttgttagaacaggctacaaagagttttgaaagcctcctgatt
cctcagcttccctgttctcctccagatgtggaagcaatgcgcatctatctgattctggca
gaatgtccagtgctgcaagactctaaatattacatatctttgactgttcccctggccatg
gccatactccgcctggacacaaatcccagcaaggttcttgataactggtggaccttgttg
gactgtgctgttttctctcgactcattgagttgtataaaagcactgtggtgtttctgttg
actggaggtaaagccttgttgatccctgtgtttctggaaagctacatcaatgctgcatta
aaacttctggagaagttacacaaggtaaatcttaaagcccagcatgtggattacaatcac
ttctatatacctgatattacaagtcttgtggatattcaggaagagtacctgaagtggttc
ctgagtaaggctgaaattaaaattagatctcctcctctacagacctcggtgactttgtgt
gcctatccgtttatattaaatgctcaagccaagacaacaatgctgcagacggatgctgag
ttgcagatgcagatggccgtgagtggagccaatttgcacaacatgttcatgctgctgacg
ctggagcccctcttggcccgcaatcccttcctggtgctgcatgtaaggcgggataacctg
gttagtgacgccctacgtgagctcagcatctactccgacatcgacctcaagaagccactc
aaggtcatttttgatggagaagaggctgtagatgcaggaggggtaacaaaagagttcttc
cttctgctcctcaaagaactgctggatccagtctatggaatgttcacccattacgaagaa
tcaaaccttctttggttctcagacaaatgttttgttgaactcaactggttccacctcatt
gggattacatgcggcctggcgatctataactccactgtggtagacctgcacttccccttg
gccctctacaagaagctgctggatgtacctccttctctggaggacctgaaggaactgtcc
cccactgaaggaaggagtcttcagcaactcctggattatcaaggggatgatgtggaggag
tccttctgtctgaattttgccatcacaagggaaaactatggactaactgaagtcaaggag
cttgtccaagaaggagaaaacatcacagtgaacaaggacaacagggaggagtttgtacaa
gcctacctgaactatgttttcaatgactctgtgaaggagctgtacactgctttctccagc
ggtttcctgaaggtctgtggagggaaggtcctgtcactctttcagccctccgaactcatg
gccatggtagtgggaaacaataactataactgggaggagatggaaaagaatgcagtttac
aaaggtgaatattcagccactcaccccacagtgaagatgttctgggaggtcttccatgaa
tttccactggaaaagaaaaaacaattcctgttgttcctcacaggcagtgatcgcattccc
atttatggcatggagagcctgcgagttgtgattcaatcaacatcagcagaggagcactac
ctgccagtagctcacacctgctataacctgctggacatgccccgctacaagaccaaagag
atcctcaggaaaaggctcacccaggccatagaacagtatgagggattcagtttggtgtga
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