Lepisosteus oculatus (spotted gar): 102694828
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Entry
102694828 CDS
T07349
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04144
Endocytosis
loc04517
IgSF CAM signaling
loc04530
Tight junction
loc04810
Regulation of actin cytoskeleton
loc05100
Bacterial invasion of epithelial cells
loc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
102694828
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102694828
09144 Cellular community - eukaryotes
04530 Tight junction
102694828
09142 Cell motility
04810 Regulation of actin cytoskeleton
102694828
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102694828
05100 Bacterial invasion of epithelial cells
102694828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
loc04131
]
102694828
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
loc04812
]
102694828
Membrane trafficking [BR:
loc04131
]
Others
Actin-binding proteins
Arp2/3 complex
102694828
Cytoskeleton proteins [BR:
loc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
102694828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
eIF2A
Rax2
PEP5_VPS11_N
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
102694828
NCBI-ProteinID:
XP_006637176
Ensembl:
ENSLOCG00000004536
UniProt:
W5MAL4
LinkDB
All DBs
Position
LG13:complement(8776917..8789929)
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AA seq
369 aa
AA seq
DB search
MSYHSFLLEPISCHAWNKDRSQIALCPNNHDVYIYKKEGTKWTKIHELKEHNGQVTGIDW
APESNRIVTCGTDRNAYVWTLKGGVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI
SVCYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEEKP
SPTPWGSKMPFGELMFESSSTSGWVHSVCFSNSGSRVAWVSHDSCVAVADAGKNTAISSL
TSETLPLLTVTFITENSLVAAGHDCYPGLFVYNEEKGTITFGGKLDVPKQNAQRGMTARE
RFQNLDKKATTETKEAILETLHKNSISQISIMEGGKSKCTKFCTTGMDGGMTVWDVKTLE
SAMKDLKIV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccacagttttctcctggaacccatcagctgccatgcctggaataaagacagg
agtcaaattgcattatgtcccaacaaccatgatgtctatatctacaagaaggaaggaacc
aaatggaccaagatccacgagctgaaggagcacaatggccaagtgacaggcatcgactgg
gccccagaaagcaatcgcattgtgacctgtgggactgatcgcaatgcctatgtctggacc
ctgaagggcggcgtgtggaagcccactctggtcatcctgaggatcaaccgagctgcccgc
tgtgtcaagtggtcccccaaggaaaacaagtttgctgtgggcagtggctcccggctcatc
tccgtctgctactttgagcaggaaaacgactggtgggtctgcaaacacattaagaagccc
attcgctccactgtcctgagcctggactggcatcctaacaatgtgcttctggcagctggc
tcctgtgacttcaagtgcaggatcttctcggcctacatcaaagaggtggaggagaagcca
tctccaactccctggggttccaagatgcctttcggagagctgatgttcgagtccagcagc
acatcaggctgggtgcacagtgtctgcttctccaacagtggcagccgcgtggcctgggtc
agccatgacagctgtgtggctgtagcagatgctggcaaaaacactgccatttccagcctg
acctccgagaccctccctctcctgactgttaccttcatcacagagaacagcttggtggca
gctggacatgactgctacccagggctctttgtgtacaatgaggaaaaagggaccattacc
ttcgggggtaagctggatgtgccaaagcagaacgcgcagcgtgggatgacagcaagggag
cgctttcagaacctggacaagaaagccaccactgagaccaaagaagccatcctggaaacc
ctgcacaagaacagcatcagccaaatctctattatggagggaggcaagtccaaatgtaca
aagttttgtaccacaggcatggatggagggatgacagtttgggatgttaagactctggaa
tctgcgatgaaagatctgaagattgtttga
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