Lepisosteus oculatus (spotted gar): 102694887
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Entry
102694887 CDS
T07349
Symbol
gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loc03021
]
102694887 (gtf3c3)
Transcription machinery [BR:
loc03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
102694887 (gtf3c3)
TFIIIC, fungi type
102694887 (gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_8
TPR_1
TPR_14
TPR_19
TPR_12
TPR_11
TPR_CcmH_CycH
TPR_9
ANAPC3
TPR_15
TPR_EMC2
HAT_Syf1_CNRKL1_C
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
102694887
NCBI-ProteinID:
XP_015214164
Ensembl:
ENSLOCG00000005238
LinkDB
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Position
LG12:complement(10721615..10735848)
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AA seq
876 aa
AA seq
DB search
MSGFNPELIEYLEGKISFEEFEQLREERKAKERVAEGGATEDEDAAPLEDSLPSTSQSPR
RSYPHHTGDVEEGISPSVQRVFASMLGEGSEEQEEDEEEDDEEQTVAPSAGDVFALEMEL
NRENKKMMRERRHRSKLPRALRGLMGEANIRYARGEKEDAITMCMEIIRQAPLAYEPFST
LAMIYEDQGDMEKSLQFGLIAAHLNPSNREDWVKLADMSLEQDNIRQAIFCYSKAIKYDP
SNVRYLWERSSLYEQVGEHKLAMDGYRRILNLLPSTDGEHFMQLARDMAKSYYETNDLLS
AIGVMDEALQKHPSLVTVESVNMAAELHISNKQHKRALEVLVQFCGITLERDGAKQEMEE
GEEIKEGEVLSVEIPDEVPIDIRVKLMVCLIHLQMFKPLDGLLTSLMEQSPEELGDLYLD
VAEAFLEQGEYSSALPLLSALVCSEHYNLPVVWLRHAECLKALGHMEVAVESYSKVVEMA
PFHLEARLSLSTLQQQLGRPQKALDALEPMHDPDTLAQDASAAQQELKLLLHRSTLLCSQ
GRMDDYTDTLLTMLAMLLKVAMNRAQVCLISSSCSGERHLYLIKVSRDKISDIDDQEAAY
LDIIGKTSVLSREDWWQLFLQCVFALCDLKRFGEAELLVDSSLEYYSFYDDRVKRKELEY
FGLSAAILDQNYRKAYNYIRLMLMDCVERPQLWNIFNQVTLHSQDVRHHRFCLRLLLKNP
ESHALCVLNGHNAFVSGSFKHALGQYVQAFRTQPSEPLYSLCVGLTFIHMASQKFVLKRH
PLLLQGFSFLNRYMELRGPCQESFYNTGRALHQLGLTHLAIHYYQRALDCPPLQLEGIEN
DQVDLHREIAYNLSLIYQSSGNLSMARYLLYKFCTV
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtttcaatccagagcttattgaatatttggaggggaaaatatcttttgaagag
tttgaacaactgagggaggagcgcaaagccaaggagagggtggcagaaggtggggccaca
gaggatgaggatgctgcacctctggaggactctctccccagcacgtcccaaagcccacgg
cgttcctatccacaccacacaggggatgtagaggagggtatcagcccctcggtgcagcga
gtctttgcctcaatgctgggggaaggatcagaagagcaggaggaagacgaggaggaggat
gatgaagaacagacggtggcaccatcagcaggagatgtgtttgccctggagatggaactg
aaccgggagaacaaaaagatgatgagggaaaggcggcaccgaagtaaactgcctcgcgct
cttcgtggtctgatgggtgaggccaatatacgttatgcccgtggagaaaaggaagatgcc
ataacgatgtgcatggaaattatccggcaggctcccctggcttatgagcccttttccacc
ctggcgatgatttatgaggaccagggtgacatggagaagtccttgcagtttggcctgatt
gcagctcacctgaatcccagcaaccgtgaggactgggtcaaactggccgatatgtccctg
gagcaggacaacattcgccaggccattttctgttactccaaagccattaagtacgacccc
agtaacgtgcggtatctgtgggagcggtccagtctgtacgagcaggtcggggagcacaag
ttggccatggatgggtaccggcgtatcctcaacttgctgccctctactgatggagagcac
tttatgcagctggcccgtgacatggccaagagttactatgaaacaaatgatctgttgtca
gctatcggggtgatggatgaggcgctgcagaaacacccttccctggtcactgtggagagc
gtcaacatggcagccgaactccacatctccaataaacagcacaaacgtgcactggaggtg
ctggtgcagttctgtggcatcactcttgagagagatggtgccaagcaggaaatggaggag
ggtgaggagataaaagaaggggaggtgctctcagtggagattcctgatgaggtgccaatt
gacatccgggtgaagctgatggtgtgcctgattcacctgcagatgttcaaacctctggat
ggcctgctaacaagtctgatggaacagagcccggaggagttaggagacctgtacctggat
gttgccgaggccttcctggagcagggggaatacagctccgctctgccattgctgagtgca
ctggtctgctctgaacattataaccttcctgttgtatggctgcgccacgcagaatgcctg
aaagccctgggccatatggaggtagctgtagagagctacagtaaggttgtggagatggcg
ccctttcacctggaagcccggctctcgctctccaccctgcagcaacagctgggccgccca
cagaaggcactggatgctctggagccgatgcatgaccccgatacattggcacaggatgcc
agcgctgcacagcaggagctcaagctgctgctacatcgctccacgcttctgtgctctcag
ggcaggatggatgactacactgacacacttctcacgatgctggccatgctgctcaaggta
gcgatgaaccgtgcacaggtctgtctgatctctagctcatgctctggtgagcggcatctc
tacctgattaaggtgtcccgggacaaaatatctgacattgatgaccaggaggcagcctat
ctggacatcatagggaagacgagtgtgctgtctcgagaagattggtggcagttgtttttg
cagtgtgtgtttgcactttgtgacctgaaacgatttggggaggcagagctgttggtggac
tcctccctggagtattactccttctatgatgatcgtgtcaagaggaaagagctcgagtat
tttggcctctctgctgctatccttgaccagaactaccgcaaggcttacaattacatacgg
ctgatgctgatggactgtgtggagcgcccgcagctctggaacatctttaaccaggtgacc
ctgcactcgcaggatgtgcgtcaccaccgtttctgcctgcgtctgctgttgaagaaccca
gagagccacgcactgtgtgtgctcaatggacacaatgcctttgtctctggcagcttcaag
catgcgctaggtcagtatgtccaggccttccgcacgcagcccagtgagcccctgtatagc
ctttgtgtgggactgaccttcatccacatggcctcgcagaagtttgtcctgaaacgacac
cctctactgctgcagggcttctcattcctgaatcgctacatggagctgagggggccatgc
caagagagcttctacaacacaggcagagcactgcaccagctgggactgactcacctcgcc
atacactactaccagagggcactggattgccccccactgcagctggagggaattgagaat
gaccaggtagacctgcacagagagattgcctacaacctgtctctcatttaccagtccagt
gggaacctcagtatggcacgttacctactttacaagttctgtactgtatga
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