Lepisosteus oculatus (spotted gar): 102695499
Help
Entry
102695499 CDS
T07349
Symbol
rnft1
Name
(RefSeq) RING finger and transmembrane domain-containing protein 1 isoform X1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102695499 (rnft1)
Enzymes [BR:
loc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102695499 (rnft1)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102695499 (rnft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
zf-RING_6
RING_XB3-XBAT31
UBZ_FAAP20
zf-RING_16
Zn_ribbon_6
zf-Nse
GAGA
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
102695499
NCBI-ProteinID:
XP_015223066
Ensembl:
ENSLOCG00000003795
UniProt:
W5M836
LinkDB
All DBs
Position
LG22:4595705..4601484
Genome browser
AA seq
417 aa
AA seq
DB search
MKLRSQHDRRGSIESRTLPILKESSTVMQTNPNELNIQAGNGLSLTLQAEPLTSPGSSQP
EEVHIPISCAHGEPSGRPANRRPRTAAHGHGHSHGHGRPHSRSELEPESGDSDPEPGEPS
SSLSELRYLFRWVQKSLPFIVIVCAKLVIQHALGIAVGVGLLTTFLYANKIIQNQVFLQE
RRSTLECAWLLFFLTASSLLLYYTFQAETLYYCLIFVNPGIESLGFWDVLWAVGVTNFML
KFIFMGLKCLILFLPFSLLAFRSRGRWYMLTEEMGQVYQTVVPVPMWFRYLITYQEVDGS
TGLTLGIFLALVYLILKLLGLYGQWESFHKMLRIFFSEEHHGAAATKSQCSEAGDACPIC
QAEFRQPRVLLCQHIFCDECISLWFNREKTCPLCRTVITDKVHKWKDGATSPYLQIY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccggagtcagcatgacaggagaggttctatcgagtccagaacactgccgata
ctgaaagaatcgtccactgtaatgcagactaacccaaacgagcttaacattcaggcgggc
aatggcttatctctaaccctccaagcggagccgctaaccagccccgggtcctcgcagcct
gaagaggtgcacattcccatctcctgtgcccacggagagcccagcgggaggccggcgaac
cggcgacccaggaccgccgctcacggccacggccactcccacggccacggccgcccccac
tcgcgcagcgagctcgaacccgagtcgggggattccgatccggaacccggggagcccagt
agttccctttcggagctgcgctacctcttccgatgggtccagaaaagcctcccttttatc
gtcatcgtgtgtgccaaactagttattcagcacgccctgggtatagctgtaggcgttggg
ttgctgacaacctttctgtatgcaaataaaatcattcagaaccaagtctttttgcaggag
cgccgttccacactggagtgtgcatggctgctgttcttcctgacagcttcgagccttctt
ctgtattacacgttccaggccgagaccctttactactgcttaatctttgtcaatcctggc
attgaatccctggggttctgggatgttttatgggccgtaggagtaacgaacttcatgttg
aagttcatattcatgggactgaagtgccttattctgttcttgccattcagccttctggct
ttcagatcgcggggccggtggtacatgctgacagaggagatgggccaggtttaccagaca
gtggttcctgtccctatgtggttccgttacctgatcacctatcaggaagtggacggctcg
acaggattgacactggggatatttctagccttggtctacctcatactgaagctccttgga
ctatacggccagtgggaatcatttcataagatgctccggatctttttcagcgaggagcac
cacggagcagcggccacgaagagccagtgcagcgaggcgggggacgcctgtccgatctgc
caggccgagttcaggcagccgcgggtcctgctctgccagcacattttctgcgatgaatgc
atttcgctgtggtttaatcgtgagaagacctgcccattgtgtcggactgtgatcaccgat
aaagtccacaagtggaaagatggtgcaacatccccttatttacagatctactga
DBGET
integrated database retrieval system
