Lepisosteus oculatus (spotted gar): 102695520
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Entry
102695520 CDS
T07349
Symbol
tmc3
Name
(RefSeq) transmembrane channel-like protein 3 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
loc02000
]
102695520 (tmc3)
03037 Cilium and associated proteins [BR:
loc03037
]
102695520 (tmc3)
Transporters [BR:
loc02000
]
Other transporters
Pores ion channels [TC:
1
]
102695520 (tmc3)
Cilium and associated proteins [BR:
loc03037
]
Other cilia and associated proteins
Stereociliary proteins
102695520 (tmc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
DUF3504
Coa1
Orf78
Motif
Other DBs
NCBI-GeneID:
102695520
NCBI-ProteinID:
XP_015198351
Ensembl:
ENSLOCG00000012848
UniProt:
W5N5B3
LinkDB
All DBs
Position
LG3:complement(38024658..38045663)
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AA seq
1131 aa
AA seq
DB search
MTTVSEPVAISRPVRSSRRYKSVRKNSRRIYSPYQDQQPSNSDDDDKIEERIESSDPEEM
FQNIQIQKEIIANIRTRPWPMRHKLKALKQAREIVLKYEGRLTRTRGYQAAGADLLKKLS
RLVYNIVVLFIPWEMRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFVILPELLA
GAPFGTTRSKTIPKEHLASAQDLDTIWSLGGYLQYSVLFYGYYGRVRKIGSAGYRLPLAY
FLVGMTVYAYSFIILLRKMAKNSRLSLASASDENYTFCWRVFCAWDYLIGNPEAAESKAA
AIVNNIREAILEEQEKKKDKSLAVMISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQE
KPELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTTLRFQLARVLVLYLGNLYSL
IIALLDKVNSMSSTEVSVGSSNWSDSTAFLATIALPEEENLSTIVPEITERRNSTLSLGL
VENTPRTIIPVALNKTASYEYNMKSQQDQCWETYVGQEMLKLSIIDMIFTVASILLIDFF
RGLFVRYLSDCWCWDLESRFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAFNVLKL
IGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYRPSQTCG
PFSGQEKIYDIISETIATDFPLWFSKVMNYVTSPVVVLPALLLLFMLIYYLQSIARSLKF
TNNQLRMQLQTERTEDKKKVFQMAAARMQSQEGSDKKPEQESDLTSQESSIRSSSPRRNG
SVANFESPVSRGNSIRTIAQSASRTDVNRAATTSQSPSIPILQKQRKEQIPNRHPGFLHG
GASGSCKSKSYHHVAYNPSSRYTENVHSDPLFRKSIRPMHPEALGGGGGGGGAQGFSSRR
SHTTRYVIVNEHEARKKLLRSSTRIPRHYRVDEPGGIVELYPRHIKRYSIQTPQRSRQPH
LSEEEEEEEEVKKVRRGSFIQTHRPRSLSDLHQPARFYIGEKVESHHSLVKDLMKSCYGF
YEDGCEVEWEDAASRPRSRTNVRAADPLEQHPEPPVKPKLKHKADPCLTESDSASIASSS
DQQNSSTDQYIQVIHSKEKYLKPTGKLAKKKSKANIDFNVSGSNELICSNV
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagtcagcgagccagtagcaattagcagacccgtgcgatcttctagaagatac
aaaagtgtgagaaaaaactccagaagaatctattcaccctaccaagatcagcaacccagt
aactcggatgatgatgacaaaattgaagagaggattgagagcagcgatcctgaggaaatg
ttccagaacattcagattcagaaggagatcatcgccaacattcgcactcgaccttggccc
atgaggcacaaacttaaagccctcaagcaagccagggagattgttttgaagtatgaaggc
aggctgaccaggacaagggggtatcaagctgcaggagctgacttgctgaaaaaactgtca
cgtttggtatataacatagtcgtccttttcattccatgggaaatgaggattaagaaaatt
gaaagtcactttggatctggcgttgcttcttacttcatctttctgagatggctgtttggt
attaacattgtcttaaccatcatgaccggagcatttgtgatactgcctgaacttctggca
ggagcgccttttggaaccacgagaagcaagaccattccaaaggaacacctcgcctcagca
caggacctcgacaccatctggtcactggggggctacctccagtattctgtcctgttttat
ggatattacggccgagttaggaagattgggagcgctggataccgcctgcccttggcttac
ttcctggttgggatgactgtctatgcctacagcttcattatcctgttaagaaaaatggca
aaaaactcccggcttagtttagccagcgcctcagatgagaactacacattttgctggcgt
gtcttttgtgcctgggactacctgattggaaaccccgaggcagcagagagcaaagcagca
gcgattgtcaacaacatcagggaagcaattctagaagaacaggagaagaagaaggacaaa
agcctggctgtaatgattagtctgagaatcctggccaacattcttgttctgctgtcactc
gccgggagtatttacatcatctactttgtcgttgatcgctctcagaaacttgagcaagag
aagccagaattaaccttgtgggagaagaatgaggtcagtgtggttgtgtctcttatcacc
atgattgctccctctgcttttgagctggtggcccagctggagatgtaccatcccagaaca
acactgagatttcagcttgccagggttcttgtcttgtacctgggaaacctctacagcttg
atcattgctcttctggacaaggtgaacagcatgagttcaaccgaggtttctgttggttcc
agcaactggtcagactccacagcttttctggccactattgctcttccagaagaggaaaac
ctttcaactattgtgcctgaaatcactgagagaaggaacagcactctgagcttaggcctg
gtggagaacacacccagaaccatcattcctgtagcccttaataaaacagcatcatatgag
tacaacatgaagtcgcaacaagaccagtgctgggaaacctacgttggacaggaaatgctg
aaactttcaattatagacatgatttttaccgtggccagtatcttattgattgatttcttt
cgtggcctttttgttcgatacctgagtgattgctggtgctgggatctggagagcaggttt
cctgaatacggtgaatttaaaatagctgaaaatgtcctgcatctgatttacaaccaagga
atgatatggatgggtgccttcttctctccctgcctcccagcatttaatgttctcaagctg
atcgggctgatgtacctcaggagctgggcagtgctcacatgtaatgttccacatcagcag
gtcttcagagcctccagatccaacaatttctaccttgccatgctgttatttatgctgttc
ctctgcatgctccccacaatctttgcaatagtcaggtatagaccatctcaaacctgcggg
cctttcagtggccaagagaagatatacgacataatttctgaaactattgctactgatttc
cccttgtggttcagcaaagtcatgaactacgtcacaagccctgtggttgtccttccagcc
ctattgctgctttttatgttaatctactatcttcagtcaattgcgagatcattaaagttc
actaacaatcagctgagaatgcagcttcaaacagagagaacagaagataagaaaaaagtt
ttccagatggctgcagctagaatgcaaagccaggaagggagtgacaagaagccagagcag
gagagcgatcttacgagccaggagtcctccattcgctcctcttcgcccaggcgcaacggc
agtgtggccaactttgagtctccggtcagcaggggcaacagcattcgcaccatagcacag
tctgcgtcccgcacggatgtcaacagggcagcaaccacgtcacaaagtccttccatcccc
atattacaaaaacaaagaaaggaacagatcccaaacaggcatccaggatttttacatgga
ggcgcgagtggctcctgtaaatcaaagtcctaccaccatgtggcatacaacccctccagc
aggtacacggagaatgtccattcagatcccttgttcagaaagagcatccggcccatgcac
ccagaggccctcggaggaggaggaggaggaggaggggcgcagggcttctccagccgcaga
tctcacaccacgcgctatgtgattgtcaacgagcacgaggcccggaagaaactgctgagg
tcttccaccaggataccgcggcactacagggtagacgagccagggggcatagtggagctg
tatcccaggcacatcaaacgatacagcattcagactcctcagaggtcacgccagccacac
ctcagtgaagaggaagaggaggaggaagaggtaaagaaagtccgtcggggctccttcatc
cagacgcaccggccccgatctctgtctgatctgcaccagccagcgcgcttttacatcggg
gaaaaagtggagagccaccactccctggtcaaagacctgatgaagagctgttacgggttt
tatgaagatggctgcgaagtggagtgggaggatgcagcctctcgccctcgctcccggaca
aacgtcagagccgcagatcccctggagcagcatcccgagccgccagtcaagcccaagctg
aaacacaaagcagatccgtgcctcacagaatcggactcggcatccatcgcatccagcagc
gatcagcaaaacagcagcaccgaccagtacatccaggtcatccacagcaaggagaaatac
ctgaagcccacgggcaagctggctaaaaagaagtctaaggccaatattgattttaatgtt
tctggatcgaatgaactgatctgctccaatgtgtag
DBGET
integrated database retrieval system
