Lepisosteus oculatus (spotted gar): 102695532
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Entry
102695532 CDS
T07349
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
loc03036
]
102695532 (msh4)
Chromosome and associated proteins [BR:
loc03036
]
Eukaryotic type
Meiosis-specific proteins
Others
102695532 (msh4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
nSTAND_NTPase5
AAA_23
AAA_29
ATPase_2
Motif
Other DBs
NCBI-GeneID:
102695532
NCBI-ProteinID:
XP_015205696
Ensembl:
ENSLOCG00000011230
LinkDB
All DBs
Position
LG7:complement(9974765..9990146)
Genome browser
AA seq
938 aa
AA seq
DB search
MFRSSTNDTVDSSEPGRSSLSPSSDAPGPAPPGSWSSLSPVKRCARSGGGPGQVGSTRSD
PSSSSERSRVAPTSTTAPSRDDSSVVGRISNLGWARVPNLASGNSSSSVWGAGTPQLRRT
PLSSGACRSSSGHHSRTPQMERTMTTCSSVSSASVASVIVAVVEGRGLARGEIGMASIDL
TCPELVLSQFSDTGTYAKILTKLHILTPLEILMPDTASEKGKGTKLFRLVTENLQNISIT
AVQRKYFNEGKGLEYIQQLSAPEFSTVLMEVQAKYYCLAAAAALLKYFEFMQNAVYAPKS
LKVSFKGSEQTAMIDSSSARNLELVVNNRDPRSEHTLLGVLNYTKTAGGARRLRSNILEP
LVDANTINMRLDAVQELLQDEELFFGLKNAIGRFLDIDQLLSVLVQIPKQETVQLSEAKI
MHVIHLKHTLELVSPLKAVLQNCQTVLLKAYCNSLDDSRFDIILEQIKTVINDDTTYMKG
NLNMRTQKCYAVRPNINEFLDIARRAYTEIVDDIAGMVTQLGEKYDLPLRTSFSTTRGFF
IQLKLDGVVLPNGQLPSEFIKVTKFKNNYSFTTADLIKMNDRCDEALREIFHMSYVVVCQ
LLSTVHEHVHCLYKLSDAVSMLDMLLSLANTCTISDYVRPEFTDTLAIKQGRHPILERIS
GQQPISNSSYISEGSNFILITGPNMSGKSTYLKQVALCQIMAQIGSFIPAEYASFRIADQ
IFTRIGVDDDFETSSSTFMLEMKELAYIIHNVSHKSLIIIDELGRGTSAEEGVGICHAVC
EFLLKFRAFTIFATHFLELCQLETLYPNVENLHMEVQHTRSSDNTEKVTYTYLLNRGCSE
ERNYGLKAAEITALSPSIIHEAKEITSHISKQLWAKKHSDPETQKQRAVYHLATRLLQTA
RNSCLDPDSLRIYLKGLKKHYQSEIQAAQESVSMNTEE
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgcagcagcactaacgatacggttgacagctcagagccaggtcgcagctcgctt
tctccgtcgtccgatgcaccaggcccagctccgccggggtcctggagttcgctgtccccc
gtgaagcggtgcgcccggtcgggaggaggccccggccaagtgggcagcacacgcagcgac
ccttcatcttcatcagagaggtcaagggtagcgcccacctccactacagcaccttccaga
gacgattcttctgttgtaggcagaatctctaacctagggtgggcacgcgtgccaaacctc
gcctcgggtaacagcagctcctccgtttggggtgcagggacaccccagctgcgcaggacc
ccgctgtcgtctggggcttgcagaagctcgtctggtcaccactctcgcactccccagatg
gagcgcaccatgacaacttgttcatctgtttcctctgcttccgtcgcctcggtgatcgtg
gcagtggtggaggggcggggtcttgcccggggtgagatcggcatggccagtattgaccta
acatgccccgagctcgtactttctcaattctctgacactggcacatatgctaagatctta
acaaaactccacatcttaaccccattggaaatattaatgccagacactgcaagtgaaaag
ggcaaaggaacaaagctcttcagactcgtcacagagaacctccagaatatttccatcact
gctgttcagaggaagtatttcaatgaggggaaaggactggaatacatccagcagctttct
gcacccgagttcagcacggtccttatggaggtgcaagctaaatactactgcctggctgca
gcagcagctttgctgaaatactttgaatttatgcagaacgcggtatatgccccaaaatcc
ctgaaagtgagtttcaaagggagcgagcagacagctatgattgactcttcttctgcccgt
aatttggagctggtggtgaacaacagggatcccaggagtgagcacactctgctgggggtc
ctaaattataccaaaactgctgggggggctcgcagactgcgctccaacatcttggagccc
ctggtggacgccaacactatcaacatgcgcctggatgctgtgcaggagttgctgcaggac
gaagagctcttctttggtttaaagaatgcaattggacgctttctagatatagaccagctg
ctctctgttctagtgcagatccctaagcaggaaacggttcagctgtccgaggcgaagatc
atgcacgttattcacctgaaacacacacttgagctggtgtcacctctgaaggcagtgcta
cagaactgtcaaactgtcctgctgaaagcgtactgtaactctctggacgacagcagattt
gatattatcctagaacagataaaaactgtgataaatgatgataccacttacatgaaagga
aatctcaacatgcgaacacagaagtgctacgcagtgcgtcccaacatcaatgagttcttg
gatatcgctcgacgtgcttacactgaaattgtggatgacattgcaggaatggtcacccag
ctgggggagaaatatgatttgcctttgagaactagcttcagcacaacaagggggttcttt
attcagctgaaactggatggagtggtactgccaaatggacagcttccctctgagtttata
aaggtcactaaatttaagaataactacagcttcacaacagcagacctgataaaaatgaac
gacagatgtgatgaagctctgagggagattttccacatgtcctatgtggtggtatgtcag
ctgctcagcactgttcatgagcatgtacactgcctttacaagctgtctgatgcagtttcc
atgctagacatgctgctgtccttggcaaatacttgcactatctctgactatgtgcgccct
gaattcacagacactttagcaatcaagcagggacgacaccccatcctagaaaggatctca
gggcagcagcccatctccaacagcagctacatctccgagggcagcaacttcatcctcatc
actggccccaacatgagtggcaagtccacttatctcaagcaggtggcactctgccagatc
atggcacaaataggctcctttattcctgcagagtatgcctctttccgaattgcagaccag
attttcaccaggattggggtggatgatgactttgaaacaagttcatccacctttatgttg
gaaatgaaggagctagcttacattatacataatgtgagccacaagtctctcatcattata
gatgagctgggaagaggtaccagtgccgaggaaggtgttggcatttgtcatgcagtctgt
gaatttctactcaaatttagggcattcaccatatttgctacgcatttcctggagctctgc
caactggagacactctatcccaacgtggagaatctccacatggaggttcagcacacccgc
agctccgacaacactgagaaagtcacctacacctacctgctcaaccggggctgctctgag
gagagaaactatggactgaaggctgcagagatcacagccttatcaccttccataatacat
gaggcaaaagagattacctctcatatcagcaaacagctatgggcaaagaaacacagtgac
ccggagacgcaaaaacagcgtgcagtgtatcacctggcaacacgcctcctgcagactgcg
aggaactcctgcctggaccctgacagcctccgcatctacctcaagggtctgaagaaacac
tatcagtcagagatccaggctgcccaagagtctgtgtctatgaacacagaggagtga
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