KEGG   Lepisosteus oculatus (spotted gar): 102695615
Entry
102695615         CDS       T07349                                 
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
loc  Lepisosteus oculatus (spotted gar)
Pathway
loc03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:loc00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    102695615 (rexo1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:loc03009]
    102695615 (rexo1)
Ribosome biogenesis [BR:loc03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    102695615 (rexo1)
SSDB
Motif
Pfam: EloA-BP1 RNase_T REX3_middle
Other DBs
NCBI-GeneID: 102695615
NCBI-ProteinID: XP_006639982
Ensembl: ENSLOCG00000001203
UniProt: W5LZ14
LinkDB
Position
LG19:2079778..2097370
AA seq 1194 aa
MLRSTGFFRGIDCPFIANTANDSNEKSSGRRCNRPYCHFRHSKPRRASYNANKPEPKELS
FKENEQGYDPYNPEVVRPAGQNGDPTEHSGPLDPGFLELELVNKAIEAVKSEVEREQKKL
SRFEDQEYDPMARVKGHKAASKDPYSSLEYDPSSYQIISAGDYNPTPRSRKYTLDSDSKS
LGNSLEYVPTAVSKAAIKKPAHPPPARQKYTLDGCKPSTDLEYDPMSNYSARPLNKKSSL
DKKGRKRHQKAGKAEEGYMPAMKKPRQKTDSQTYSASPTFSDSDDENGDEYHPSPISRLQ
GGSFPHRKAEEEGTGFSRVGAKKEVSEVPDSEDSECTDPGWTEEKGGEEQPARRALEKKS
AKTERAPGGERGSRKNCLKDKGGKKAEEGKTTNKEAPKKERSDGKKADERDKAKEKSTKD
IKKSKSEGSGGKAEKRRAEAGKADQARGDGGLKKGKSVDRADASRKDSKDPGKLKSKELR
NGKLESRDRERKAGSREKVKPPTAKAKQRTLSHVDLFGDESGEEGNPGGSRARGAAAEGR
RSSKRRASEFSSSSSSEDEAQEDDVLLEDLDLSGQQMDLDCESDPMEECLRIFNESTDVK
MEDKGRQGKQVPKEPAEDGGTDGTLTTLFPGQKKRVSHFVTKGDAEVTPRPVIRPYRRPT
AQEICYQRMQIAQQQAAQLAAAVKTAGAMPGYPGEKKRVAHRPSPSTLAAKLGPVEGKKT
GSNAASPSRSGPSSLPVKAHTSAAILSKTCSTTAQRRMAHTPSLKSSTLKRPVIPTEFGA
KVPTNVRQRYLNIFIDECIKFCSTEEEAFEKALVEEKVVYDRSSSRNIYLNVAVNTLKKL
RSQSNTPISPTTKSPSGGSNKKSLSHEEMLGGRLAAKTSYTIKRSGKQPEEELTGSVLYR
KMKEYLMTQEQLQEHGYPCSHPDKPGRAVVCGVAEKKTADPFTKVCCRCGTEYMVTLSGS
CVRREECHHHWGRLRRQRVPGGWETQYSCCSGSVGSPGCQVAKQHVQDGRKENLEGFVKT
FSKPMPPDGYPGMYALDCEMCYTKQGLELTRVTVIDSELKVVYDTFVKPDSKVVDYNTRF
SGVTEEDLENTTTTIRDVQAVLLSMFSADSILIGHSLESDLFALKLLHSTVIDTAIVFPH
RLGLPYKRALRSLMADHLKRIIQDNVEGHDSSEDASACMELMIWKIREDAKVKR
NT seq 3585 nt   +upstreamnt  +downstreamnt
atgctgagatccaccggcttcttccgagggattgactgcccttttatcgcaaacaccgcg
aacgacagtaacgagaaaagcagcggacggcggtgcaatagaccgtactgtcacttcaga
cacagcaagccgaggagggcgtcttacaacgccaacaagccggagcccaaggagctgagc
ttcaaagaaaacgaacaaggctatgatccatacaatcctgaggtagtgaggccagcaggg
cagaatggagatccaacagagcactctggaccgctggatcctggtttcctggagctggag
ctggtcaacaaggccatcgaagctgtcaagagtgaagtggagcgtgagcagaagaagctc
tcgcgctttgaggaccaagagtatgaccccatggccagggtcaaagggcacaaggctgct
tcaaaggacccctatagctcccttgagtatgaccccagtagctatcagatcatctccgcg
ggagactacaaccccaccccacgctccaggaagtacactctggactcggacagcaagagt
ttgggaaactctctggaatacgtgcccactgctgtttccaaggccgccatcaaaaaacct
gctcatcctcccccagctcggcagaaatacactctagatggctgtaaaccttcaacggat
ttagagtatgatcccatgtccaattactcagcccgacccttgaataaaaagagctccttg
gacaagaagggacgcaagaggcaccaaaaggcaggaaaagcagaggagggttacatgcca
gccatgaagaaacctaggcagaaaacagattcccagacgtatagcgcaagcccaaccttt
tcggattcggatgacgaaaacggggacgagtatcatcccagtcccatcagcaggctgcag
ggtggcagcttcccccacagaaaagcagaggaagaggggacgggcttcagccgggtgggg
gcgaagaaggaggtttccgaagtgcccgacagcgaggactctgagtgcacggacccgggc
tggaccgaggagaaaggaggagaggagcagcctgcccgcagagctctggagaagaaaagc
gctaaaactgagagagccccgggtggggagaggggctccagaaagaactgcctgaaggac
aagggagggaagaaagcagaggagggcaagacgactaacaaggaggcgcccaagaaggag
agaagcgatgggaagaaagcagacgagcgcgataaagcgaaggagaagagcaccaaggac
atcaagaagagcaaaagcgagggaagcggtgggaaggcggagaagcgcagggcggaggcg
gggaaggcggatcaagcacggggcgatggcggcctgaagaagggcaagtctgtggacaga
gcggacgcgagcaggaaggactccaaggaccccggcaagctgaaatcaaaggagctgaga
aatgggaagctggagagcagggacagggagaggaaagcgggcagcagagagaaagtgaag
ccgccgaccgccaaggcgaagcagcggacgctgagccacgtggacctgttcggggacgag
agcggggaggaaggcaaccccggcggcagcagggcacggggggccgcggcggaggggcgg
cgcagctccaagagaagggcgtccgagttctcctcctcttcgtcatccgaggacgaggcg
caggaagacgacgtcctcttggaagacttggacctttctggtcagcagatggacttggac
tgcgagtcggaccccatggaagagtgcctgaggatattcaacgagtccacggacgtcaaa
atggaggacaaggggagacagggcaagcaggtccctaaagagccagcagaggatggaggc
acagacggcactttaacaaccctcttcccgggacagaagaagagagtttcgcactttgtg
accaaaggagacgctgaggtgacccccagaccagtgattagaccatacaggaggcccaca
gcccaggagatctgctaccagcgcatgcagattgcacagcagcaggcagcacagctggcg
gcagctgtcaaaacggccggggccatgcccgggtacccgggggagaagaagagagtcgct
caccggcctagcccctctaccctggcagccaagctgggtcctgtggaaggcaagaagact
ggcagtaacgcggcctcccccagcaggtcgggcccgagctccctgccggtgaaggcgcac
acctccgccgccatcctttccaagacctgctccaccacggcgcagaggcggatggcgcac
acccccagcttgaagagctccaccttgaagaggccagtcattccgacggagtttggagcc
aaagtccccaccaacgtccgccagagatacctcaacatcttcatagacgagtgcatcaag
ttctgctccacagaggaggaggctttcgaaaaggctctggtggaggagaaggtggtgtat
gacaggagcagcagtcgcaatatctacttgaacgtggccgtcaacacgctgaaaaaactc
aggagtcaaagcaataccccgatatcgcctacaaccaagagtcccagtggaggaagcaac
aagaagagtctttcccatgaggagatgctgggtggcagactggcagcaaagaccagttac
accatcaagagatcaggaaaacagccagaggaagagctgacaggttcagtgctgtacagg
aagatgaaggagtacctcatgacgcaggagcagctgcaggagcacggctacccctgctcg
cacccggacaagcctggccgggcagtggtctgcggtgtggccgaaaagaagactgcggac
ccctttaccaaggtgtgctgccgctgtgggacggagtacatggtcactctgtcagggagc
tgcgtccgcagggaggagtgccaccaccactggggcagactgcgccggcagagagtgcct
ggcgggtgggagacacagtacagctgctgctcggggtctgtaggctctccaggctgccag
gttgccaagcaacacgtgcaggatgggcggaaggagaacctggaagggttcgtgaagacc
ttcagcaagccgatgccccctgatggctatccagggatgtacgctctggactgcgagatg
tgctatacgaagcagggtctggagctgaccagggtgacagtcatagactcggagctgaag
gtcgtctatgacaccttcgtcaagcctgacagcaaagttgtggactacaacacacggttt
tcgggggtgacagaagaagacctggagaacaccaccaccaccattcgggacgtgcaggcg
gtgctgctcagcatgttcagcgcagactccatcctcattgggcacagcctggagagcgat
ctgtttgcactgaagttgctccacagcaccgtcatcgacacggccatagtcttccctcac
cgcctgggtctgccatacaagcgcgcgctgcgcagcctcatggctgaccacctcaagcgc
atcatccaggacaacgtggaaggacacgactccagtgaggacgccagcgcctgcatggag
ctgatgatctggaagatcagggaggacgccaaggtgaagagatga

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