Lepisosteus oculatus (spotted gar): 102695615
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Entry
102695615 CDS
T07349
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
102695615 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
loc03009
]
102695615 (rexo1)
Ribosome biogenesis [BR:
loc03009
]
Eukaryotic type
Pre-60S particles
RNases
102695615 (rexo1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
REX3_middle
Motif
Other DBs
NCBI-GeneID:
102695615
NCBI-ProteinID:
XP_006639982
Ensembl:
ENSLOCG00000001203
UniProt:
W5LZ14
LinkDB
All DBs
Position
LG19:2079778..2097370
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AA seq
1194 aa
AA seq
DB search
MLRSTGFFRGIDCPFIANTANDSNEKSSGRRCNRPYCHFRHSKPRRASYNANKPEPKELS
FKENEQGYDPYNPEVVRPAGQNGDPTEHSGPLDPGFLELELVNKAIEAVKSEVEREQKKL
SRFEDQEYDPMARVKGHKAASKDPYSSLEYDPSSYQIISAGDYNPTPRSRKYTLDSDSKS
LGNSLEYVPTAVSKAAIKKPAHPPPARQKYTLDGCKPSTDLEYDPMSNYSARPLNKKSSL
DKKGRKRHQKAGKAEEGYMPAMKKPRQKTDSQTYSASPTFSDSDDENGDEYHPSPISRLQ
GGSFPHRKAEEEGTGFSRVGAKKEVSEVPDSEDSECTDPGWTEEKGGEEQPARRALEKKS
AKTERAPGGERGSRKNCLKDKGGKKAEEGKTTNKEAPKKERSDGKKADERDKAKEKSTKD
IKKSKSEGSGGKAEKRRAEAGKADQARGDGGLKKGKSVDRADASRKDSKDPGKLKSKELR
NGKLESRDRERKAGSREKVKPPTAKAKQRTLSHVDLFGDESGEEGNPGGSRARGAAAEGR
RSSKRRASEFSSSSSSEDEAQEDDVLLEDLDLSGQQMDLDCESDPMEECLRIFNESTDVK
MEDKGRQGKQVPKEPAEDGGTDGTLTTLFPGQKKRVSHFVTKGDAEVTPRPVIRPYRRPT
AQEICYQRMQIAQQQAAQLAAAVKTAGAMPGYPGEKKRVAHRPSPSTLAAKLGPVEGKKT
GSNAASPSRSGPSSLPVKAHTSAAILSKTCSTTAQRRMAHTPSLKSSTLKRPVIPTEFGA
KVPTNVRQRYLNIFIDECIKFCSTEEEAFEKALVEEKVVYDRSSSRNIYLNVAVNTLKKL
RSQSNTPISPTTKSPSGGSNKKSLSHEEMLGGRLAAKTSYTIKRSGKQPEEELTGSVLYR
KMKEYLMTQEQLQEHGYPCSHPDKPGRAVVCGVAEKKTADPFTKVCCRCGTEYMVTLSGS
CVRREECHHHWGRLRRQRVPGGWETQYSCCSGSVGSPGCQVAKQHVQDGRKENLEGFVKT
FSKPMPPDGYPGMYALDCEMCYTKQGLELTRVTVIDSELKVVYDTFVKPDSKVVDYNTRF
SGVTEEDLENTTTTIRDVQAVLLSMFSADSILIGHSLESDLFALKLLHSTVIDTAIVFPH
RLGLPYKRALRSLMADHLKRIIQDNVEGHDSSEDASACMELMIWKIREDAKVKR
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgctgagatccaccggcttcttccgagggattgactgcccttttatcgcaaacaccgcg
aacgacagtaacgagaaaagcagcggacggcggtgcaatagaccgtactgtcacttcaga
cacagcaagccgaggagggcgtcttacaacgccaacaagccggagcccaaggagctgagc
ttcaaagaaaacgaacaaggctatgatccatacaatcctgaggtagtgaggccagcaggg
cagaatggagatccaacagagcactctggaccgctggatcctggtttcctggagctggag
ctggtcaacaaggccatcgaagctgtcaagagtgaagtggagcgtgagcagaagaagctc
tcgcgctttgaggaccaagagtatgaccccatggccagggtcaaagggcacaaggctgct
tcaaaggacccctatagctcccttgagtatgaccccagtagctatcagatcatctccgcg
ggagactacaaccccaccccacgctccaggaagtacactctggactcggacagcaagagt
ttgggaaactctctggaatacgtgcccactgctgtttccaaggccgccatcaaaaaacct
gctcatcctcccccagctcggcagaaatacactctagatggctgtaaaccttcaacggat
ttagagtatgatcccatgtccaattactcagcccgacccttgaataaaaagagctccttg
gacaagaagggacgcaagaggcaccaaaaggcaggaaaagcagaggagggttacatgcca
gccatgaagaaacctaggcagaaaacagattcccagacgtatagcgcaagcccaaccttt
tcggattcggatgacgaaaacggggacgagtatcatcccagtcccatcagcaggctgcag
ggtggcagcttcccccacagaaaagcagaggaagaggggacgggcttcagccgggtgggg
gcgaagaaggaggtttccgaagtgcccgacagcgaggactctgagtgcacggacccgggc
tggaccgaggagaaaggaggagaggagcagcctgcccgcagagctctggagaagaaaagc
gctaaaactgagagagccccgggtggggagaggggctccagaaagaactgcctgaaggac
aagggagggaagaaagcagaggagggcaagacgactaacaaggaggcgcccaagaaggag
agaagcgatgggaagaaagcagacgagcgcgataaagcgaaggagaagagcaccaaggac
atcaagaagagcaaaagcgagggaagcggtgggaaggcggagaagcgcagggcggaggcg
gggaaggcggatcaagcacggggcgatggcggcctgaagaagggcaagtctgtggacaga
gcggacgcgagcaggaaggactccaaggaccccggcaagctgaaatcaaaggagctgaga
aatgggaagctggagagcagggacagggagaggaaagcgggcagcagagagaaagtgaag
ccgccgaccgccaaggcgaagcagcggacgctgagccacgtggacctgttcggggacgag
agcggggaggaaggcaaccccggcggcagcagggcacggggggccgcggcggaggggcgg
cgcagctccaagagaagggcgtccgagttctcctcctcttcgtcatccgaggacgaggcg
caggaagacgacgtcctcttggaagacttggacctttctggtcagcagatggacttggac
tgcgagtcggaccccatggaagagtgcctgaggatattcaacgagtccacggacgtcaaa
atggaggacaaggggagacagggcaagcaggtccctaaagagccagcagaggatggaggc
acagacggcactttaacaaccctcttcccgggacagaagaagagagtttcgcactttgtg
accaaaggagacgctgaggtgacccccagaccagtgattagaccatacaggaggcccaca
gcccaggagatctgctaccagcgcatgcagattgcacagcagcaggcagcacagctggcg
gcagctgtcaaaacggccggggccatgcccgggtacccgggggagaagaagagagtcgct
caccggcctagcccctctaccctggcagccaagctgggtcctgtggaaggcaagaagact
ggcagtaacgcggcctcccccagcaggtcgggcccgagctccctgccggtgaaggcgcac
acctccgccgccatcctttccaagacctgctccaccacggcgcagaggcggatggcgcac
acccccagcttgaagagctccaccttgaagaggccagtcattccgacggagtttggagcc
aaagtccccaccaacgtccgccagagatacctcaacatcttcatagacgagtgcatcaag
ttctgctccacagaggaggaggctttcgaaaaggctctggtggaggagaaggtggtgtat
gacaggagcagcagtcgcaatatctacttgaacgtggccgtcaacacgctgaaaaaactc
aggagtcaaagcaataccccgatatcgcctacaaccaagagtcccagtggaggaagcaac
aagaagagtctttcccatgaggagatgctgggtggcagactggcagcaaagaccagttac
accatcaagagatcaggaaaacagccagaggaagagctgacaggttcagtgctgtacagg
aagatgaaggagtacctcatgacgcaggagcagctgcaggagcacggctacccctgctcg
cacccggacaagcctggccgggcagtggtctgcggtgtggccgaaaagaagactgcggac
ccctttaccaaggtgtgctgccgctgtgggacggagtacatggtcactctgtcagggagc
tgcgtccgcagggaggagtgccaccaccactggggcagactgcgccggcagagagtgcct
ggcgggtgggagacacagtacagctgctgctcggggtctgtaggctctccaggctgccag
gttgccaagcaacacgtgcaggatgggcggaaggagaacctggaagggttcgtgaagacc
ttcagcaagccgatgccccctgatggctatccagggatgtacgctctggactgcgagatg
tgctatacgaagcagggtctggagctgaccagggtgacagtcatagactcggagctgaag
gtcgtctatgacaccttcgtcaagcctgacagcaaagttgtggactacaacacacggttt
tcgggggtgacagaagaagacctggagaacaccaccaccaccattcgggacgtgcaggcg
gtgctgctcagcatgttcagcgcagactccatcctcattgggcacagcctggagagcgat
ctgtttgcactgaagttgctccacagcaccgtcatcgacacggccatagtcttccctcac
cgcctgggtctgccatacaagcgcgcgctgcgcagcctcatggctgaccacctcaagcgc
atcatccaggacaacgtggaaggacacgactccagtgaggacgccagcgcctgcatggag
ctgatgatctggaagatcagggaggacgccaaggtgaagagatga
DBGET
integrated database retrieval system