Lepisosteus oculatus (spotted gar): 102696220
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Entry
102696220 CDS
T07349
Symbol
rad51c
Name
(RefSeq) DNA repair protein RAD51 homolog 3 isoform X1
KO
K10870
RAD51-like protein 2
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03440
Homologous recombination
loc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102696220 (rad51c)
03460 Fanconi anemia pathway
102696220 (rad51c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
loc03400
]
102696220 (rad51c)
DNA repair and recombination proteins [BR:
loc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
102696220 (rad51c)
FA (Fanconi anemia) pathway
Other FA pathway factors
102696220 (rad51c)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
ATPase
RecA
DnaB_C
AAA_18
nSTAND3
AAA_22
AAA_24
Motif
Other DBs
NCBI-GeneID:
102696220
NCBI-ProteinID:
XP_015223310
Ensembl:
ENSLOCG00000001305
LinkDB
All DBs
Position
LG22:435464..446224
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AA seq
381 aa
AA seq
DB search
MQRDVSSLALAPGVKVKLIGAGFLSAGDLGELRPLELSREAGITQQEALEALEALRAARG
EAEPGRGGRLTALELLQRERALGAVVTFCSALDRALGGGLPLGKTTEICGAPGVGKTQLC
VQLAVDVQIPPCFGGLGGQAVYVDTEGSFLVQRAVDLAEAAVQHCGAVAGDAEQQEAMKE
FTVETILSQLFLFRCHDYVELLAQTYLLPDFLSQHPKVRLVVIDSIAFPFRSNFEDLSLR
TRLLNGLAQQLIQLATQHGVAVALTNQMTTKLGKSQSMLVPALGESWGHAATQRLLLHWE
GPSRFASLYKSPSQREATVPFQITAQGFRDVPPADLQLPSADPSAAPSGDPPTSRKRPRA
DEGELSGSSRRPPAHEGQSLS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcagagggatgtgtccagcctcgccctcgcccccggggtcaaggtgaagctgatcggc
gccgggttcctgtcggccggggacctcggggagctgcggccgctggagctcagcagagag
gcgggcatcacgcagcaggaggcgctggaggcgctggaggcgctgcgggccgcgcggggc
gaggctgagccgggccgcgggggccggctgaccgcgctggagctgctgcagagggagcgg
gctctgggggcggtcgtcaccttctgctccgcgctggaccgggccctggggggaggcctg
cccctgggcaagaccacggagatctgcggggcgcccggcgtgggcaagacccagctctgt
gtccagctggcggtggacgtgcagatccccccgtgtttcgggggcctggggggccaggcg
gtgtacgtggacaccgagggcagcttcctggtgcagcgcgcggtggacctggcagaggcg
gcggtgcagcactgcggggccgtggctggagacgcagaacagcaggaagccatgaaggag
ttcaccgtggaaaccatcctctcgcagctcttcctcttccgctgtcacgactacgtggag
ctgctggcccagacctacctcctgcctgatttcctcagccagcaccccaaggtgcgcttg
gtggtgatcgacagcatcgccttcccgttccgcagcaacttcgaggacctgtccctccgg
acccggctcctcaacggcctggcgcagcagctgatccagctggccacccagcacggcgtc
gcggttgcactgaccaatcagatgacgacaaaactggggaaaagccaatcaatgcttgtg
cctgctttaggtgagagctggggccacgccgccacacagaggctcctgctgcactgggag
gggccgagcaggttcgcgtcgctgtacaagtctcccagccagagagaggccaccgtgccc
ttccagatcacagctcagggcttcagggacgtcccacctgctgacctgcagctgccctcg
gctgacccctctgcagccccctctggagaccccccgacgtcccgcaagagaccccgtgca
gacgagggagagctttcggggtccagtcgccggccccccgcacacgaagggcagtcgttg
tcctga
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