Lepisosteus oculatus (spotted gar): 102696397
Help
Entry
102696397 CDS
T07349
Symbol
rqcd1
Name
(RefSeq) cell differentiation protein RCD1 homolog
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102696397 (rqcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102696397 (rqcd1)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102696397 (rqcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
ADSL_C
Motif
Other DBs
NCBI-GeneID:
102696397
NCBI-ProteinID:
XP_006636691
Ensembl:
ENSLOCG00000008931
LinkDB
All DBs
Position
LG12:19244589..19256061
Genome browser
AA seq
295 aa
AA seq
DB search
MLATGAAVTTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSCGT
IAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLYPF
LHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKTVA
TFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLSDN
PRAREALRQCLPDQLKDTTFAQVLKDDTTTKRWLAQLVKNLQEVTDPRNIPLPPQ
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgttggctacaggggcggctgtaaccacagcgctggcgcaagtggatagggagaagatc
tatcaatggatcaacgagctgtcaagtccagaaacccgtgagaatgccttgctggagctc
agcaaaaaacgggagtcagtaccagatctggcacccatgctctggcactcctgtggtacc
atagctgctctcctgcaggaaattgtcaacatatatccctctataaatccaccaacacta
acagcacatcagtccaacagagtatgtaatgccctagcacttctgcaatgtgtggcttct
catccagagacaaggtctgcatttcttgcagcacacatcccactgttcctctaccccttt
ctgcacaccgtcagtaaaacacggccttttgagtatcttcggctaactagcttaggagtc
ataggagctctggtgaagacagatgagcaagaagtcatcaactttttactgaccacagag
atcattccactgtgtctgcgcatcatggagtctggcagtgaattgtcaaaaacggttgct
actttcatactacagaaaattctcctggacgacacagggctcgcttacatttgtcaaaca
tacgaacgtttctctcatgttgccatgatacttggaaaaatggtcctacagctgtcaaaa
gaaccttctgctcgcttgctgaagcatgttgtacgctgttatctccgcctttctgacaat
cccagagcccgagaagccctccgccagtgcctgcctgaccagctcaaagacacaaccttt
gctcaggtcttaaaggatgataccacaaccaagcgctggctggctcagctggtgaagaat
cttcaagaagtcacagacccaaggaatattcccctacctccacaatag
DBGET
integrated database retrieval system
