Lepisosteus oculatus (spotted gar): 102696482
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Entry
102696482 CDS
T07349
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04010
MAPK signaling pathway
loc04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102696482
04020 Calcium signaling pathway
102696482
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
loc04040
]
102696482
Ion channels [BR:
loc04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102696482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
102696482
NCBI-ProteinID:
XP_015222164
Ensembl:
ENSLOCG00000001584
LinkDB
All DBs
Position
LG21:complement(1494455..1654286)
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AA seq
2411 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGAGRGGSRQGGPPGGPRMYKQSMAQRARTMAIYNPIPVKQNC
FTVNRSLFIFSEDNIIRKYAKRITEWPPFEYMILATIITNCIVLALDQHLPSGDKTPMSG
RLEKTEPYFIGIFCFEAGIKIIALGFVLHKGSYLRNGWNVMDFVVVLTGILAVAGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYMGR
FHKTCFKIETGEIAADFPCGTEPPARLCPNETECREYWIGPNFGITNFDNILFAVLTVFQ
CITMEGWTEILYNANDASGNTWNWLYFVPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
QEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDRIAEEKSPLDVLKRAKTKKSKNDLI
HAEEGEDHFTDISSVGSPFARTSLKSGKNESSSYFRRKEKRLRFFIRRMVKSQSFYWIVL
CLVALNTLCVAIVHYDQPDWLTKALYLAEFVFLGLFLTEMTLKMYGLGPRNYFHSSFNCF
DFGVIVGSIFEVVWAAVKPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSI
ISLLFLLFLFIVVFALLGMQLFGGHSKAPDTSSDRFNFEDETPTNNFDTFPAAILTVFQI
LTGEDWNAVMYHGIESQGGVRRGMLSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELT
KDEEEQEEATSKKLALQKAKEVKEVSPMSAANISIAAFVKQNRGALSRSSSVSSVNSPSY
VCSPARRVLRYSREQQKSMKLMSVWEQRTTQIRRHNLRASCEALYSELDPEERVRLSSVL
HLRPDMKTHLDRPLVVEPRDESRDNADGAKPADGTAPPDGPGPGPGEATDRPPARDAGEP
AAPRKHHRHHDRPAEDRPEPGNENGDTGGSSNGKEGRHRLHHSRSKDQEGRGKEGKGERS
RSREAAKRHHHQGPAEDGGGGEKEHRRHCSHRQPKEGNGTVNNGGGRGERRGRHRDGPRP
ANREGEAGAGGAKGENGERLEKRHKHRSKTQPPTEGEDRRENGEREPEGDAADKERKNHC
PKEKQADAGTSALATTPQQLGGEKPEDSDNQKNVKRTAQTVNNASTVAIPLTVTAPPGET
TVIPLNSIDCDTLPKTEEKKSLEDMTKNGPKQILPYSSMFVFSQTNPVRRLCHYIVNLRY
FEMCILVVIAMSSIALAAEDPVQADAPRNNVLKYLDYVFTGVFTFEMVIKMIDLGLLLHP
GSYFRDLWNILDFIVVSGALVAFAFSSFMGSHQTVTRGTKGKDINTIKSLRVLRVLRPLK
TIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKELKK
DCRGQFLDYDKDGVAAQPREWKKYEFHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDATYE
DQGPSPGFRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACI
DFAISAKPLTRYMPQNKQSFQYKMWKFVVSPPFEYFIMAMIALNTVVLMMKFYGAPVVYE
AMLKYLNVVFTALFSLECILKIIAFGALNYLKDAWNVFDFVTVLGSITDILVTEINTSNK
LINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQV
FGNIDLQDDTAINRHNNFRTFFQALILLFRSATGEAWHEIMLSCLSNRHCDERSGSTGKE
CGSNFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDP
AACGRIAYLDMYEMLLHMSPPLGLGKKCPARVAYKRLVKMNMPIAEDNTVHFTSTLMALI
RTALEIKLGSGVIQQQLCDAELKKEIATVWPNLSQKTMDLLVTPHRPNELTVGKVYAALM
IFDYYKLNRSKRLQQQQQTAGGLPKNKVSELFKPMLPLTLMRDQLPPMNNTKPPPQPAST
TSLNNGGALPGQDTAVKESPSWVTEKAQEVFQLNKKRPVQRGQSEDIPNTTRAQEAVEMK
KMDHSANGESQPGLESQGRAASMPRLNAEMQRGHSRTPRTYLAPIPDTSPMKRSVSTLAP
QRPPEVHLPDYALDRPGPDRPHHHHHHHRCHRRREKDRKQHSLDRSPSGQTHSNAGTPGD
PGSAVPLGEATSRDRRQDRGRSHERKHHSSSSEKQRYYSCDRYGSRDHSQTKSNTASRST
SPVDTRESGLNKQGSGSAKGSPLMLTSGDSTPCRGRRQLPQTPLTPRPSVAYKTANSSPV
HFGAATPGVPSFCPGRLSRGLSEHNALLRGEGDSQVRAHLAVTRIGSDPYLGYRDDRSGP
FWALPEDALAAHADRSPRTSASYGVSLPPPPQLQTRGVPNGYHYALGVNAGPGSGTRGRQ
YYQEADEDDWC
NT seq
7236 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcggagacgatcttcctacccgctatggaggcggcggtccagcgggcgct
gggcgaggaggcagccggcagggaggcccgccgggcggcccgaggatgtacaagcagtcg
atggcccagagagccaggaccatggccatttacaaccccatccccgtcaagcagaactgc
ttcaccgtcaacagatccctcttcatcttcagcgaagacaacatcatacggaaatacgcc
aaaagaataaccgagtggcctccatttgagtacatgatcctagccaccatcatcaccaac
tgcatcgtgttggctctggaccagcacctgccctctggagacaagacccccatgtccggg
agactggaaaagacggagccctactttattggaatattttgctttgaagccggcatcaag
atcatcgcccttgggtttgtgttacataaaggctcctacctccggaacggctggaatgta
atggatttcgtggtcgtcttaacggggatcctggccgtagccgggacggatttcgatctg
cgcacactgagagctgttcgagtactacggccactgaagctggtgtcaggaataccaagc
ctgcaagtggtgctgaagtccataatgaaggccatggttcccctgctgcagatcggcctg
ctgctcttcttcgccattgtcatgttcgccatcatcggcctggagttctacatgggcagg
ttccacaagacctgtttcaagatagagacaggcgagatcgccgcagatttcccctgcggt
acggagcccccggcccggctctgccccaatgagacggagtgccgggagtactggatcggg
cccaacttcggcatcaccaatttcgacaacatcctcttcgcggttctcaccgtcttccag
tgcatcacgatggagggctggaccgagatcctgtataatgccaacgatgcctcaggaaac
acctggaactggctgtatttcgtcccgctcatcatcatcggctctttcttcatgctgaac
ctggtcctaggagtcctgtctggcgagtttgccaaggagcgtgagcgcgtggagaagagg
caggagttcctgaagctgcgacgccagcagcagatcgagcgcgagctgaccgggtacctg
gagtggatatgcaaggcagaggaggtcatgctggcagaagaggacaggatcgctgaggag
aaatctccgctggacgtgttaaaaagagccaagaccaagaagagcaagaatgacctgatc
cacgctgaggaaggagaggaccacttcacagacatctcctccgtgggctccccgttcgcc
cgcaccagcctgaagagcggcaagaacgagagctcctcctacttccggcggaaggagaag
aggctgcggttcttcatccgccgcatggtcaagtcgcagagcttctactggatcgtcctg
tgcctggtggccctgaacacactgtgcgtggccatcgtgcactacgaccagccggactgg
ctcaccaaggcgctgtacttggctgagtttgtgttcctgggcctctttctgaccgagatg
accttgaagatgtatgggctgggacccagaaactactttcactcttctttcaattgcttt
gattttggggtgatagtgggtagtatttttgaggtggtctgggcagcagtgaagcccggg
gcctcattcggcatcagtgtcctgagagccctgcgtctgctcaggattttcaaagtaaca
aagtactggaactctctgcggaacctggtggtgtccctgctcaactccatgaagtccatc
atcagcctgctcttcctcctcttcctcttcatcgtcgtcttcgctctgctgggcatgcag
cttttcggcggccattccaaggcgccagacacaagttctgacaggtttaactttgaggat
gaaactcccactaacaacttcgacactttccctgctgccattctcacagtgttccagatc
ctaacaggagaggactggaatgccgtgatgtatcatgggattgagtcgcagggcggtgtg
cgaagaggaatgctctcctccatctacttcattgtcctgacgctgttcggtaactacacg
ctcctcaacgtcttcttggccattgccgttgacaacctggctaatgcgcaggagctaacg
aaggacgaggaagagcaagaggaagccaccagtaaaaagcttgccctccaaaaggccaag
gaggtaaaggaggtcagccccatgtcggcagctaacatttccatcgcagcttttgtaaag
caaaatcgaggtgctctatcacgcagctcgtccgtgtccagcgttaactcaccgagttat
gtctgctctcctgctcgtcgcgttttgaggtacagcagggagcagcagaagtcgatgaag
ttgatgtcagtgtgggagcagcggaccacgcagattcgccggcacaacctgcgcgccagc
tgcgaggcgctgtacagcgagctggaccccgaggagcgagtccgcctgtcctccgtgctg
cacctccggcccgacatgaagacccacctggaccggccgcttgtggtggagccgcgggac
gagtcccgcgacaacgcggacggcgccaagcccgcggatggcaccgcgcccccggacggg
cccggaccagggccgggggaggcgacagaccggccgccggccagagacgccggtgagccc
gccgccccccgcaagcaccaccggcaccacgacaggccggccgaggacaggcccgagccg
ggcaacgagaacggggacacagggggcagcagcaatggcaaggagggccggcatcgcttg
caccacagccgcagcaaagaccaggagggccggggcaaagagggcaagggcgagaggagc
cgcagcagagaggccgcgaagaggcaccatcaccagggcccagcagaagacgggggagga
ggggagaaggagcaccgccggcactgcagccaccgccagcccaaagagggcaacggcaca
gtcaacaacgggggcggccgcggcgagcgccggggccggcacagggacgggccccgcccc
gccaaccgggagggcgaggccggagctgggggagccaagggggagaacggggagcggctg
gagaaacggcacaagcaccgcagcaaaacccagccccccaccgagggggaggaccgcagg
gagaatggagagcgagagccggagggagatgcggcggataaggagcgcaagaaccactgt
ccgaaggagaagcaggcggacgcggggacaagcgccctggccaccaccccgcagcagctg
ggcggggagaagccagaggactcggacaaccagaagaacgtcaagcgcacggcccagaca
gtcaacaacgccagcaccgtcgccatccccttgactgtcacagcccccccaggagagacc
accgtcatccccctgaacagcatcgactgtgacacgctgccgaagaccgaggagaagaag
agcctggaagacatgaccaagaacgggccgaagcagatcctgccctacagctccatgttc
gtgttcagccagaccaacccggtgcggaggctatgccactacattgtcaacctgcgctac
ttcgaaatgtgcatcctggtggtgatcgccatgagcagcatcgccctggccgccgaggac
cctgtgcaagccgacgcccccaggaacaacgtgctcaaatatttggattacgtctttacg
ggagtgttcacatttgagatggtgattaagatgatcgatctgggtttgctcctccaccct
ggatcgtacttcagggacctttggaacatcctggacttcatagttgtcagtggtgctttg
gtggcctttgctttttcgagcttcatgggatcgcaccaaaccgtcaccagagggaccaaa
gggaaggatatcaacaccattaagtccctgcgtgtgctcagagtgctgcgtcccctgaag
accatcaagaggctgcctaaactgaaggctgtgttcgactgcgtggtgaactccctgaag
aacgttctgaacatcctcatcgtctacatgctcttcatgttcatctttgctgtcatcgcg
gtgcagctcttcaagggcaagttcttctactgcaccgacgagtccaaggagctgaagaag
gactgcaggggtcagttcctggactacgacaaggacggcgtggcggcgcagccccgggag
tggaagaagtacgagttccactacgacaacgtgctgtgggcgttcctcacgctcttcacc
gtgtccacgggcgagggctggcccactgtcctaaagcactctgtggacgccacctacgag
gatcagggtcccagcccgggcttcagaatggagatgtccatcttctacgtggtctacttc
gtggtgttccccttcttcttcgtcaacatcttcgtggccctcatcatcatcaccttccag
gagcaaggggacaaggtcatgtctgagtgcagcctggagaagaacgagagggcctgcatc
gactttgccatcagcgccaagcccctcacacgctacatgccccagaacaagcagtccttc
cagtacaagatgtggaagttcgtggtgtcgccgcccttcgagtatttcatcatggccatg
atcgcgctcaacactgtggtgctcatgatgaagttctatggggctccagtggtgtacgag
gcaatgctgaagtacttgaacgttgtgtttacagcgctgttttccttggagtgcatcctg
aagattattgcatttggtgccctgaactacctgaaggatgcctggaacgtgtttgatttt
gtgacagtattgggaagtataactgatatattggtcacagaaattaatacatcgaacaag
ctgatcaacctcagtttcctaaggctgttcagggctgcccgactcatcaagcttctgcga
cagggttacaccattcggattctgctctggacctttgtccagtccttcaaggccctgcct
tacgtctgccttctgattgcaatgctgttttttatctacgccatcatcggaatgcaagtt
tttggaaacattgacctgcaagacgatacagccatcaatcggcacaacaatttccgtacc
ttcttccaagctctgatacttctgttcaggagcgccacgggggaggcctggcacgagatc
atgctgtcctgcctgagcaaccggcactgcgacgagcgctccggctccactgggaaggag
tgtggcagcaacttcgcctacttctacttcgtctccttcatcttcctctgctccttcctg
atgctcaatctctttgtggccgtcattatggacaactttgagtatctgacccgagactct
tcaatactggggcctcatcacctggatgagttcatccgcgtctgggcagagtacgaccca
gcagcctgtggccgcatcgcatatcttgatatgtatgagatgctgctccacatgtcccca
cctttaggtctgggaaagaaatgtccagcgagagtcgcctacaagcgcctggtgaaaatg
aacatgcccatcgccgaggacaacaccgtgcacttcacctccacgctgatggcgctgatc
cgcacggcgctggaaatcaaactgggctcaggggtcattcagcagcagctgtgtgatgct
gaactgaagaaggagatcgccaccgtctggccaaacctctctcagaagaccatggacctg
ctggtgactccacacaggcctaacgagctgacggtggggaaggtgtacgccgctctgatg
atcttcgactactacaagctgaaccgcagcaaacggctccagcagcagcagcagacagcg
ggcgggctgccaaagaacaaggtgagcgagctcttcaagcccatgctgcctctcaccctg
atgcgggaccagctgccgcccatgaacaacaccaagccgcccccgcagcccgccagcacc
acctccctcaacaacgggggcgccttgccaggccaggacaccgctgtcaaagaatctcct
tcctgggtcacggagaaggcacaggaagtgttccagctgaacaagaagcggccggttcag
agggggcagtctgaggacatccccaacacaaccagagctcaggaggcggtggagatgaag
aagatggaccacagtgccaatggagagagccagccaggcctggagagccagggcagagcg
gcgtcgatgcccaggctgaacgcagagatgcagcggggccattctcgaactccgaggacg
tacctagcacccattcctgacacaagccccatgaagcgctctgtgtccacgctggctccg
cagcgccccccagaggtgcacctgcctgattacgctctggaccgcccggggcccgaccgg
ccccaccatcaccatcaccaccaccgctgtcaccggcgccgggagaaggacaggaagcag
cactctctggacaggtctcccagtggccagacccacagcaacgcaggcacgccaggagat
ccgggctctgccgtcccgctgggggaggccacgtcgcgggacaggaggcaggaccggggc
cggtcccacgagaggaagcaccactcctcgtcctcggagaagcagcggtactactcctgc
gaccgctacggcagccgcgaccactctcagaccaaatcgaacaccgccagccgctcgacc
tcgcccgtcgacacccgcgagtccggcctcaacaagcagggcagtggttcagctaagggg
agcccgctgatgctgacctctggcgacagcaccccctgccgagggcgcaggcagctcccc
cagacccccctcaccccccggcccagcgtcgcctacaagaccgccaactcctcgcccgtc
cacttcggcgccgccacgcccggcgtgccctccttctgcccgggccggctgagccgcggc
ctgtcggagcacaacgccctgctgcgcggtgagggcgactcgcaggtccgcgcccacctg
gccgtgacccggatcggctctgacccgtacctgggctaccgggacgatcgcagcggcccg
ttctgggccctcccggaggacgcgctggccgcccacgctgaccgctcccccaggacttca
gcctcgtacggggtgtcccttccgcccccaccccagctgcagacccggggggtccccaat
ggataccattatgccctgggtgtcaacgcagggcctggctcgggcaccagggggcgccag
tactaccaggaggcggatgaggatgattggtgctag
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integrated database retrieval system
