Lepisosteus oculatus (spotted gar): 102696750
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Entry
102696750 CDS
T07349
Symbol
chrnb1
Name
(RefSeq) acetylcholine receptor subunit beta isoform X1
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102696750 (chrnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
loc04040
]
102696750 (chrnb1)
Ion channels [BR:
loc04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
102696750 (chrnb1)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
102696750
NCBI-ProteinID:
XP_006627492
Ensembl:
ENSLOCG00000013759
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Position
LG2:60337313..60371272
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AA seq
492 aa
AA seq
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MKGLGIVLLMCSICAVADASEAEKNLIAKLFTNYTLKVLPVKNVGERLVVRVGMKLASLI
DLNEKEEEMSTNVYMDLTWSDYRLSWNPAEHDNIQVLRLPAGKVWLPDIVLINNNDGVFD
VSLRVHVQAYSDGRVTWSPPALYKSSCGIKVTFFPFDWQNCTMVFRSYTYDASEIDLQYA
LDKEGKEIHEIIMDESFSENGEWQIRYKPSRKNVGPDLYEDITFYLIIERKPLIYVLNIV
IPCILITIIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLADKVPETSLGVPIIVNYLM
FTMILVTFSVILSVVVLNLHHRSPNTHVMPLWVRKIFIHLLPQYLGLLRPKTETPLSLEL
SPKREVPVSVSRAADEYFIRKPTSNFLFPKPNRFQPESLTVDLRKFINGPSHYLTLPPDL
KSAIDAVTYIAETLQAEKDYEALKEDWQYVAMVVDRLFLWIFVIFTTVGTLAIFMDASFN
DTPQDPFMNPYP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcctggggattgtgctgctgatgtgctccatttgtgctgtggcagatgcttct
gaagctgagaaaaacctgatagccaagctgttcaccaactacaccttgaaagtgctaccg
gtgaagaacgtgggggagaggctggttgtcagggtggggatgaaattggcctcgctcatc
gatctgaatgaaaaggaagaggaaatgagtaccaatgtgtacatggacttgacctggagt
gactacaggctgtcttggaatccggcggagcacgacaatatccaggtcctgaggctgcca
gcagggaaggtgtggcttccagacatcgtgctcattaacaacaatgacggtgtctttgac
gtgtctctgagagtacacgttcaggcgtacagtgatggcagagtgacctggagcccccct
gctctgtataaaagctcctgtggaatcaaggtgacgttcttccccttcgactggcagaac
tgcaccatggtgtttcgctcctacacctacgacgcctccgagatcgacctgcagtacgcg
ctggacaaggagggcaaagagattcatgagatcatcatggacgagagtttcagcgagaac
ggagagtggcagatccgttacaagccttcccgaaagaacgtggggcctgatctttacgaa
gacatcaccttctacctcatcatcgagaggaagcccctcatctacgtcctcaacatagtc
attccttgcatcctcatcaccatcatcgccattttcaacttctacctccctcctgatgca
ggggagaagatgggtctgtccatcaacgtgctgctgactcttacggtcttcttgctcctg
ctggcggacaaggtgcccgagacctctctgggggtgcccatcatcgtcaactacctgatg
ttcaccatgatcctggtgaccttctcagtcatcctcagcgttgtggtgctcaacctgcac
caccgctcccccaacacccacgtcatgcccctgtgggtccgcaagattttcatccacctc
ctgcctcagtaccttggactgctgcgccccaaaactgagaccccactgtcactggagttg
tcccccaagagggaggtgccggtgtctgtaagccgagcagcggacgagtacttcatccgg
aagcccacctccaacttccttttccccaagcccaaccgattccagccagagagcttgact
gtggatttgcggaaattcatcaatggacccagccactacctcactctgcctccagacctg
aagtcagccattgatgctgtcacctacattgcagagactctccaggctgagaaagactac
gaggcgctgaaagaggactggcagtacgtggcaatggtggtagaccgcctcttcctctgg
atcttcgtcatcttcaccactgtgggcaccctggccatcttcatggatgccagtttcaat
gacacacctcaggatccctttatgaatccctatccttga
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