Lepisosteus oculatus (spotted gar): 102696832
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Entry
102696832 CDS
T07349
Symbol
hnrnpa1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102696832 (hnrnpa1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
loc03019
]
102696832 (hnrnpa1)
03041 Spliceosome [BR:
loc03041
]
102696832 (hnrnpa1)
Messenger RNA biogenesis [BR:
loc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102696832 (hnrnpa1)
mRNA cycle factors
Common to processing body (P body) and stress granule
102696832 (hnrnpa1)
Spliceosome [BR:
loc03041
]
Common components
Common spliceosomal components
hnRNP proteins
102696832 (hnrnpa1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Fz_Smo_sans_CRD_N
RBD_AKAP-17A
Motif
Other DBs
NCBI-GeneID:
102696832
NCBI-ProteinID:
XP_006629337
Ensembl:
ENSLOCG00000006476
LinkDB
All DBs
Position
LG4:16109642..16118750
Genome browser
AA seq
359 aa
AA seq
DB search
MSKEAPREPEQLRKLFIGGLSFETTDESLRAHFEQWGQLTDCVVMRDPSTKRSRGFGFVT
YSSVREVDAAMNARPHKVDGRVVEPKRAVSREDSTRPGAHMTVKKIFVGGIKEDTEEHHL
RDYFSEFGKIEVIEIMTDRASGKKRGFAFVTFDDHDSVDRIVIQKYHTVNGHNCEVRKAL
SKQEMASAGMNMRGRGGSSSGNFGRGGGFGGNDFGRDGYFGDRGGFGGRGGYGGDGGYNG
FGGDSGYGGGPGYGSNRGYGGGQGYGGGQGGGYGGNGGGYDNYNNGGGGSFGGGSFGGSG
NYNDFGNYNSQSSSSYGPMKGGSNFGGGSGRNSGGPYGGGYGGGSGSGGYGSSAGGRRF
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaggaggccccccgtgaaccggaacagctgcgcaagctcttcatcggagggctg
agcttcgagacgacggacgagagcctgcgagcccacttcgagcaatggggacagctcacg
gactgcgtggtgatgcgggaccccagtacgaagcggtcccgggggttcggcttcgtgacg
tactcctcggtgcgggaggtggacgctgccatgaacgcccggccccacaaggtggatggc
agggtggtggagcccaagcgcgccgtgtctagagaggactcgacccggcccggcgcccac
atgaccgtcaagaagatcttcgtgggcggcatcaaggaggacacggaggagcaccacctg
cgcgactacttcagcgagttcggcaagatcgaggtcatcgagatcatgaccgaccgggcc
agcggcaagaagaggggcttcgccttcgtcaccttcgacgaccacgactccgtggaccgg
atcgtcatccagaagtaccacacagtgaacggccacaactgtgaggtgaggaaagcgctg
tcgaagcaggagatggcgagcgcagggatgaacatgagaggacgtgggggcagcagctca
gggaactttggcagaggtggtggatttggaggtaatgattttggccgtgatggatacttc
ggtgaccgtggaggctttggaggccgtggtggatatggaggagatgggggctacaacggc
tttggaggagacagtggctacggcggcggccctggctacgggagtaaccgtggctacggc
ggagggcagggttacggcggcgggcaggggggcggatacggaggcaacggaggcggctac
gacaactacaacaacggaggggggggcagcttcggaggaggaagcttcggcggcagcggg
aactacaacgacttcggcaactacaacagccagtcctcctccagctacggccccatgaag
gggggaagcaacttcggaggaggcagcggccggaacagcggaggcccatatgggggcggc
tatgggggtggctcaggcagtgggggttatggaagcagtgccggaggccgaaggttctag
DBGET
integrated database retrieval system
